RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 BRD4O60885 1362 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-213ENST00000495232 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
CSNK1E-213ENST00000495232 SLC12A5Q9H2X9 1139 aa16.81■□□□□ 0.28
CSNK1E-213ENST00000495232 TRPM3Q9HCF6 1732 aaPredicted RBP16.81■□□□□ 0.28
CSNK1E-213ENST00000495232 KTN1Q86UP2 1357 aaKnown RBP16.8■□□□□ 0.28
CSNK1E-213ENST00000495232 ABTB2Q8N961 1025 aa16.8■□□□□ 0.28
CSNK1E-213ENST00000495232 COL22A1Q8NFW1 1626 aaPredicted RBP16.8■□□□□ 0.28
CSNK1E-213ENST00000495232 USP6P35125 1406 aa16.79■□□□□ 0.28
CSNK1E-213ENST00000495232 ADAMTS2O95450 1211 aa16.78■□□□□ 0.28
CSNK1E-213ENST00000495232 AKAP12Q02952 1782 aa16.78■□□□□ 0.28
CSNK1E-213ENST00000495232 ALS2Q96Q42 1657 aa16.78■□□□□ 0.28
CSNK1E-213ENST00000495232 CPSF1Q10570 1443 aaKnown RBP16.77■□□□□ 0.27
CSNK1E-213ENST00000495232 LRP6O75581 1613 aa16.76■□□□□ 0.27
CSNK1E-213ENST00000495232 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
CSNK1E-213ENST00000495232 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
CSNK1E-213ENST00000495232 CABLES1Q8TDN4 633 aa16.75■□□□□ 0.27
CSNK1E-213ENST00000495232 A0A1W2PP64 1363 aa16.75■□□□□ 0.27
CSNK1E-213ENST00000495232 TTC21BQ7Z4L5 1316 aa16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 TTC21AQ8NDW8 1320 aa16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 MON2Q7Z3U7 1717 aa16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 NLRP6P59044 892 aa16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 C8orf37Q96NL8 207 aa16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
CSNK1E-213ENST00000495232 NGLY1Q96IV0 654 aa16.73■□□□□ 0.27
CSNK1E-213ENST00000495232 CD163L1Q9NR16 1453 aa16.73■□□□□ 0.27
CSNK1E-213ENST00000495232 EDC4Q6P2E9 1401 aaKnown RBP16.72■□□□□ 0.27
CSNK1E-213ENST00000495232 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
CSNK1E-213ENST00000495232 NRKQ7Z2Y5 1582 aa16.7■□□□□ 0.26
CSNK1E-213ENST00000495232 MARF1Q9Y4F3 1742 aaKnown RBP16.7■□□□□ 0.26
CSNK1E-213ENST00000495232 MYOM1P52179 1685 aa16.69■□□□□ 0.26
CSNK1E-213ENST00000495232 C11orf95C9JLR9 678 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-213ENST00000495232 ZNF772Q68DY9 489 aaPredicted RBP16.69■□□□□ 0.26
CSNK1E-213ENST00000495232 ABCA3Q99758 1704 aa16.69■□□□□ 0.26
CSNK1E-213ENST00000495232 PIK3C2AO00443 1686 aa16.69■□□□□ 0.26
CSNK1E-213ENST00000495232 AFF2P51816 1311 aa16.68■□□□□ 0.26
CSNK1E-213ENST00000495232 KIF7Q2M1P5 1343 aa16.68■□□□□ 0.26
CSNK1E-213ENST00000495232 PHRF1Q9P1Y6 1649 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-213ENST00000495232 GCP02774 474 aa16.66■□□□□ 0.26
CSNK1E-213ENST00000495232 NME9Q86XW9 330 aa16.66■□□□□ 0.26
CSNK1E-213ENST00000495232 KCNH5Q8NCM2 988 aa16.66■□□□□ 0.26
CSNK1E-213ENST00000495232 USP21Q9UK80 565 aa16.66■□□□□ 0.26
CSNK1E-213ENST00000495232 CRYBG1Q9Y4K1 1723 aa16.66■□□□□ 0.26
CSNK1E-213ENST00000495232 USP19O94966 1318 aa16.66■□□□□ 0.26
CSNK1E-213ENST00000495232 ZC3H6P61129 1189 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-213ENST00000495232 PRDM11Q9NQV5 511 aa16.65■□□□□ 0.26
CSNK1E-213ENST00000495232 SOX12O15370 315 aa16.64■□□□□ 0.25
CSNK1E-213ENST00000495232 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
CSNK1E-213ENST00000495232 COG3Q96JB2 828 aa16.64■□□□□ 0.25
CSNK1E-213ENST00000495232 PANK3Q9H999 370 aa16.64■□□□□ 0.25
CSNK1E-213ENST00000495232 USP31Q70CQ4 1352 aa16.64■□□□□ 0.25
CSNK1E-213ENST00000495232 NSD3Q9BZ95 1437 aa16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 ZBTB7CA1YPR0 619 aa16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 RGS17Q9UGC6 210 aaPredicted RBP16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 ZRANB1Q9UGI0 708 aa16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 KIAA0232Q92628 1395 aa16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 CCDC7Q96M83 1385 aa16.63■□□□□ 0.25
CSNK1E-213ENST00000495232 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
CSNK1E-213ENST00000495232 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
CSNK1E-213ENST00000495232 COL14A1Q05707 1796 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-213ENST00000495232 SLIT3O75094 1523 aa16.61■□□□□ 0.25
CSNK1E-213ENST00000495232 QTRT2Q9H974 415 aaKnown RBP16.61■□□□□ 0.25
CSNK1E-213ENST00000495232 WASHC2AQ641Q2 1341 aa16.61■□□□□ 0.25
CSNK1E-213ENST00000495232 FYB1O15117 783 aa16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 CHRNA2Q15822 529 aa16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 UNC5CLQ8IV45 518 aa16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 GGNBP2Q9H3C7 697 aa16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 BTG4Q9NY30 223 aa16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 TRPC5Q9UL62 973 aaPredicted RBP16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 CPDO75976 1380 aa16.6■□□□□ 0.25
CSNK1E-213ENST00000495232 PLCH1Q4KWH8 1693 aa16.59■□□□□ 0.25
CSNK1E-213ENST00000495232 KIF20BQ96Q89 1820 aa16.59■□□□□ 0.25
CSNK1E-213ENST00000495232 KNSTRNQ9Y448 316 aa16.59■□□□□ 0.25
CSNK1E-213ENST00000495232 SLIT2O94813 1529 aa16.59■□□□□ 0.25
CSNK1E-213ENST00000495232 USP54Q70EL1 1684 aa16.59■□□□□ 0.25
CSNK1E-213ENST00000495232 NWD2Q9ULI1 1742 aa16.59■□□□□ 0.25
CSNK1E-213ENST00000495232 POTEAQ6S8J7 498 aa16.58■□□□□ 0.24
CSNK1E-213ENST00000495232 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
CSNK1E-213ENST00000495232 OVOS2A0A0J9YW53 1432 aa16.58■□□□□ 0.24
CSNK1E-213ENST00000495232 OVOS2Q6IE36 1432 aa16.58■□□□□ 0.24
CSNK1E-213ENST00000495232 BCL9LQ86UU0 1499 aa16.57■□□□□ 0.24
CSNK1E-213ENST00000495232 RXRBP28702 533 aa16.57■□□□□ 0.24
CSNK1E-213ENST00000495232 EVA1CP58658 441 aa16.57■□□□□ 0.24
CSNK1E-213ENST00000495232 ARHGEF25Q86VW2 580 aa16.56■□□□□ 0.24
CSNK1E-213ENST00000495232 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.56■□□□□ 0.24
CSNK1E-213ENST00000495232 STRN4Q9NRL3 753 aa16.55■□□□□ 0.24
CSNK1E-213ENST00000495232 AATKQ6ZMQ8 1374 aa16.54■□□□□ 0.24
CSNK1E-213ENST00000495232 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
CSNK1E-213ENST00000495232 NFAT5O94916 1531 aa16.54■□□□□ 0.24
CSNK1E-213ENST00000495232 VPS72Q15906 364 aa16.53■□□□□ 0.24
CSNK1E-213ENST00000495232 ATRNO75882 1429 aa16.53■□□□□ 0.24
CSNK1E-213ENST00000495232 NSD2O96028 1365 aa16.52■□□□□ 0.24
CSNK1E-213ENST00000495232 LTN1O94822 1766 aa16.52■□□□□ 0.24
CSNK1E-213ENST00000495232 GJD4Q96KN9 370 aaPredicted RBP16.52■□□□□ 0.24
CSNK1E-213ENST00000495232 NRAPQ86VF7 1730 aa16.51■□□□□ 0.23
CSNK1E-213ENST00000495232 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
CSNK1E-213ENST00000495232 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
CSNK1E-213ENST00000495232 AMPHP49418 695 aa16.5■□□□□ 0.23
CSNK1E-213ENST00000495232 MORC1Q86VD1 984 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms