RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.61■□□□□ 0.093e-7■■□□□ 14.3
SLC13A3-211ENST00000495082 TTC21AQ8NDW8 1320 aa15.61■□□□□ 0.09
SLC13A3-211ENST00000495082 MORC1Q86VD1 984 aa15.6■□□□□ 0.09
SLC13A3-211ENST00000495082 KIF20BQ96Q89 1820 aa15.59■□□□□ 0.09
SLC13A3-211ENST00000495082 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
SLC13A3-211ENST00000495082 GGNBP2Q9H3C7 697 aa15.59■□□□□ 0.09
SLC13A3-211ENST00000495082 ANKRD26Q9UPS8 1709 aa15.58■□□□□ 0.08
SLC13A3-211ENST00000495082 SLAIN2Q9P270 581 aa15.58■□□□□ 0.08
SLC13A3-211ENST00000495082 NME9Q86XW9 330 aa15.57■□□□□ 0.08
SLC13A3-211ENST00000495082 SCAF1Q9H7N4 1312 aaKnown RBP15.57■□□□□ 0.08
SLC13A3-211ENST00000495082 FOXO3O43524 673 aa15.56■□□□□ 0.08
SLC13A3-211ENST00000495082 PSME1Q06323 249 aa15.56■□□□□ 0.08
SLC13A3-211ENST00000495082 CCDC184Q52MB2 194 aa15.56■□□□□ 0.08
SLC13A3-211ENST00000495082 MRS2Q9HD23 443 aa15.56■□□□□ 0.08
SLC13A3-211ENST00000495082 USP31Q70CQ4 1352 aa15.56■□□□□ 0.08
SLC13A3-211ENST00000495082 OVOS2A0A0J9YW53 1432 aa15.55■□□□□ 0.08
SLC13A3-211ENST00000495082 OVOS2Q6IE36 1432 aa15.55■□□□□ 0.08
SLC13A3-211ENST00000495082 COG3Q96JB2 828 aa15.54■□□□□ 0.08
SLC13A3-211ENST00000495082 BRINP3Q76B58 766 aa15.54■□□□□ 0.08
SLC13A3-211ENST00000495082 NPHP3Q7Z494 1330 aa15.53■□□□□ 0.08
SLC13A3-211ENST00000495082 PIK3C2AO00443 1686 aa15.52■□□□□ 0.07
SLC13A3-211ENST00000495082 AATKQ6ZMQ8 1374 aa15.52■□□□□ 0.07
SLC13A3-211ENST00000495082 KRT28Q7Z3Y7 464 aa15.52■□□□□ 0.07
SLC13A3-211ENST00000495082 ZRANB1Q9UGI0 708 aa15.52■□□□□ 0.07
SLC13A3-211ENST00000495082 USP54Q70EL1 1684 aa15.51■□□□□ 0.07
SLC13A3-211ENST00000495082 TNNT2P45379 298 aaPredicted RBP15.51■□□□□ 0.07
SLC13A3-211ENST00000495082 IQSEC2Q5JU85 1478 aa15.51■□□□□ 0.07
SLC13A3-211ENST00000495082 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
SLC13A3-211ENST00000495082 SBNO1A3KN83 1393 aa15.51■□□□□ 0.07
SLC13A3-211ENST00000495082 PAK3O75914 559 aaPredicted RBP15.5■□□□□ 0.07
SLC13A3-211ENST00000495082 ABTB2Q8N961 1025 aa15.5■□□□□ 0.07
SLC13A3-211ENST00000495082 PXDNQ92626 1479 aa15.49■□□□□ 0.07
SLC13A3-211ENST00000495082 PNISRQ8TF01 805 aaKnown RBP15.49■□□□□ 0.07
SLC13A3-211ENST00000495082 MTHFSP49914 203 aa15.48■□□□□ 0.07
SLC13A3-211ENST00000495082 XPCQ01831 940 aaPredicted RBP15.48■□□□□ 0.07
SLC13A3-211ENST00000495082 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
SLC13A3-211ENST00000495082 NLRP6P59044 892 aa15.48■□□□□ 0.07
SLC13A3-211ENST00000495082 YTHDC1Q96MU7 727 aaKnown RBP15.48■□□□□ 0.07
SLC13A3-211ENST00000495082 CENPBP07199 599 aaPredicted RBP15.47■□□□□ 0.07
SLC13A3-211ENST00000495082 SOS2Q07890 1332 aaPredicted RBP15.47■□□□□ 0.07
SLC13A3-211ENST00000495082 DDX17Q92841 729 aaKnown RBP15.46■□□□□ 0.07
SLC13A3-211ENST00000495082 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
SLC13A3-211ENST00000495082 INSRP06213 1382 aa15.46■□□□□ 0.07
SLC13A3-211ENST00000495082 PNPLA6Q8IY17 1366 aa15.45■□□□□ 0.06
SLC13A3-211ENST00000495082 ALS2Q96Q42 1657 aa15.45■□□□□ 0.06
SLC13A3-211ENST00000495082 MARF1Q9Y4F3 1742 aaKnown RBP15.45■□□□□ 0.06
SLC13A3-211ENST00000495082 CFAP53Q96M91 514 aa15.45■□□□□ 0.06
SLC13A3-211ENST00000495082 TNS3Q68CZ2 1445 aa15.45■□□□□ 0.06
SLC13A3-211ENST00000495082 NHSL1Q5SYE7 1610 aa15.45■□□□□ 0.06
SLC13A3-211ENST00000495082 TOM1O60784 492 aa15.44■□□□□ 0.06
SLC13A3-211ENST00000495082 USP19O94966 1318 aa15.44■□□□□ 0.06
SLC13A3-211ENST00000495082 SPATA31A3Q5VYP0 1347 aa15.44■□□□□ 0.06
SLC13A3-211ENST00000495082 NUTM2GQ5VZR2 741 aa15.44■□□□□ 0.06
SLC13A3-211ENST00000495082 ARHGEF10O15013 1369 aa15.44■□□□□ 0.06
SLC13A3-211ENST00000495082 CDK12Q9NYV4 1490 aaPredicted RBP15.43■□□□□ 0.06
SLC13A3-211ENST00000495082 FAM9BQ8IZU0 186 aa15.43■□□□□ 0.06
SLC13A3-211ENST00000495082 SLIT3O75094 1523 aa15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 COL3A1P02461 1466 aaPredicted RBP15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 FBLN1P23142 703 aa15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 ROBO1Q9Y6N7 1651 aa15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 AHDC1Q5TGY3 1603 aaPredicted RBP15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 KCNH5Q8NCM2 988 aa15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 CERKQ8TCT0 537 aa15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 EMILIN1Q9Y6C2 1016 aa15.42■□□□□ 0.06
SLC13A3-211ENST00000495082 KIF24Q5T7B8 1368 aa15.41■□□□□ 0.06
SLC13A3-211ENST00000495082 RRS1Q15050 365 aaKnown RBP15.41■□□□□ 0.06
SLC13A3-211ENST00000495082 NFAT5O94916 1531 aa15.41■□□□□ 0.06
SLC13A3-211ENST00000495082 LMOD2Q6P5Q4 547 aa15.4■□□□□ 0.06
SLC13A3-211ENST00000495082 MAP2P11137 1827 aaKnown RBP15.4■□□□□ 0.06
SLC13A3-211ENST00000495082 MED1Q15648 1581 aaPredicted RBP15.4■□□□□ 0.06
SLC13A3-211ENST00000495082 MAP3K19Q56UN5 1328 aa15.4■□□□□ 0.06
SLC13A3-211ENST00000495082 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
SLC13A3-211ENST00000495082 PPM1GO15355 546 aaPredicted RBP15.38■□□□□ 0.05
SLC13A3-211ENST00000495082 GCP02774 474 aa15.38■□□□□ 0.05
SLC13A3-211ENST00000495082 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
SLC13A3-211ENST00000495082 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 SOX12O15370 315 aa15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 RTL1A6NKG5 1358 aa15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 FLT4P35916 1363 aa15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 DIAPH1O60610 1272 aaKnown RBP15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 NUDCQ9Y266 331 aa15.37■□□□□ 0.05
SLC13A3-211ENST00000495082 BLMP54132 1417 aaPredicted RBP15.36■□□□□ 0.05
SLC13A3-211ENST00000495082 PEAK1Q9H792 1746 aa15.36■□□□□ 0.05
SLC13A3-211ENST00000495082 LRRC59Q96AG4 307 aaKnown RBP15.35■□□□□ 0.05
SLC13A3-211ENST00000495082 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
SLC13A3-211ENST00000495082 AMPHP49418 695 aa15.35■□□□□ 0.05
SLC13A3-211ENST00000495082 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
SLC13A3-211ENST00000495082 IL13P35225 146 aa15.34■□□□□ 0.05
SLC13A3-211ENST00000495082 ARHGEF25Q86VW2 580 aa15.34■□□□□ 0.05
SLC13A3-211ENST00000495082 CRYBG1Q9Y4K1 1723 aa15.34■□□□□ 0.05
SLC13A3-211ENST00000495082 HOXC9P31274 260 aa15.33■□□□□ 0.04
SLC13A3-211ENST00000495082 HSP90AB2PQ58FF8 381 aa15.33■□□□□ 0.04
SLC13A3-211ENST00000495082 HNRNPUQ00839 825 aaKnown RBP eCLIP15.32■□□□□ 0.04
SLC13A3-211ENST00000495082 IP6K1Q92551 441 aa15.32■□□□□ 0.04
SLC13A3-211ENST00000495082 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
SLC13A3-211ENST00000495082 CPDO75976 1380 aa15.32■□□□□ 0.04
SLC13A3-211ENST00000495082 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
SLC13A3-211ENST00000495082 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
SLC13A3-211ENST00000495082 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 437.9 ms