RNA–Protein interactions for RNA: ENST00000494982.1

RAP1A-204, Transcript of RAP1A, member of RAS oncogene family, humanhuman

TSL 5

Gene RAP1A, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-204ENST00000494982 VPS72Q15906 364 aa12.68□□□□□ -0.38
RAP1A-204ENST00000494982 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
RAP1A-204ENST00000494982 TNS3Q68CZ2 1445 aa12.67□□□□□ -0.38
RAP1A-204ENST00000494982 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
RAP1A-204ENST00000494982 KNDC1Q76NI1 1749 aa12.66□□□□□ -0.38
RAP1A-204ENST00000494982 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
RAP1A-204ENST00000494982 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
RAP1A-204ENST00000494982 RGPD1P0DJD0 1748 aa12.65□□□□□ -0.38
RAP1A-204ENST00000494982 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
RAP1A-204ENST00000494982 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
RAP1A-204ENST00000494982 TNS1Q9HBL0 1735 aaKnown RBP12.65□□□□□ -0.38
RAP1A-204ENST00000494982 RPGRIP1LQ68CZ1 1315 aa12.64□□□□□ -0.39
RAP1A-204ENST00000494982 DISP2A7MBM2 1401 aa12.64□□□□□ -0.39
RAP1A-204ENST00000494982 NUTM2FA1L443 756 aa12.64□□□□□ -0.39
RAP1A-204ENST00000494982 ITGAEP38570 1179 aa12.64□□□□□ -0.39
RAP1A-204ENST00000494982 BAG6P46379 1132 aa12.64□□□□□ -0.39
RAP1A-204ENST00000494982 CLCN6P51797 869 aa12.63□□□□□ -0.39
RAP1A-204ENST00000494982 IFT172Q9UG01 1749 aa12.62□□□□□ -0.39
RAP1A-204ENST00000494982 THSD7AQ9UPZ6 1657 aa12.62□□□□□ -0.39
RAP1A-204ENST00000494982 GABBR2O75899 941 aa12.62□□□□□ -0.39
RAP1A-204ENST00000494982 MNX1P50219 401 aaPredicted RBP12.62□□□□□ -0.39
RAP1A-204ENST00000494982 CABLES1Q8TDN4 633 aa12.62□□□□□ -0.39
RAP1A-204ENST00000494982 RRBP1Q9P2E9 1410 aaKnown RBP12.62□□□□□ -0.39
RAP1A-204ENST00000494982 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
RAP1A-204ENST00000494982 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
RAP1A-204ENST00000494982 SBNO1A3KN83 1393 aa12.6□□□□□ -0.39
RAP1A-204ENST00000494982 ABCC11Q96J66 1382 aa12.6□□□□□ -0.39
RAP1A-204ENST00000494982 EN1Q05925 392 aaPredicted RBP12.6□□□□□ -0.39
RAP1A-204ENST00000494982 R3HDM1Q15032 1099 aaKnown RBP12.6□□□□□ -0.39
RAP1A-204ENST00000494982 KRT28Q7Z3Y7 464 aa12.6□□□□□ -0.39
RAP1A-204ENST00000494982 CCDC9Q9Y3X0 531 aaKnown RBP12.6□□□□□ -0.39
RAP1A-204ENST00000494982 ADGRF5Q8IZF2 1346 aa12.6□□□□□ -0.39
RAP1A-204ENST00000494982 ZBTB47Q9UFB7 747 aaPredicted RBP12.59□□□□□ -0.39
RAP1A-204ENST00000494982 ADGRB2O60241 1585 aa12.59□□□□□ -0.39
RAP1A-204ENST00000494982 ARHGEF10O15013 1369 aa12.58□□□□□ -0.4
RAP1A-204ENST00000494982 PIK3C2GO75747 1445 aa12.58□□□□□ -0.4
RAP1A-204ENST00000494982 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
RAP1A-204ENST00000494982 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
RAP1A-204ENST00000494982 STK26Q9P289 416 aa12.58□□□□□ -0.4
RAP1A-204ENST00000494982 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
RAP1A-204ENST00000494982 TRPM3Q9HCF6 1732 aaPredicted RBP12.57□□□□□ -0.4
RAP1A-204ENST00000494982 SPATA31E1Q6ZUB1 1445 aa12.57□□□□□ -0.4
RAP1A-204ENST00000494982 YTHDC2Q9H6S0 1430 aaKnown RBP12.57□□□□□ -0.4
RAP1A-204ENST00000494982 COL14A1Q05707 1796 aaKnown RBP12.57□□□□□ -0.4
RAP1A-204ENST00000494982 A0A0G2JS52 829 aa12.57□□□□□ -0.4
RAP1A-204ENST00000494982 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
RAP1A-204ENST00000494982 MYT1Q01538 1121 aa12.57□□□□□ -0.4
RAP1A-204ENST00000494982 ZNF579Q8NAF0 562 aaKnown RBP12.57□□□□□ -0.4
RAP1A-204ENST00000494982 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
RAP1A-204ENST00000494982 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
RAP1A-204ENST00000494982 RREB1Q92766 1687 aa12.56□□□□□ -0.4
RAP1A-204ENST00000494982 CRYBG1Q9Y4K1 1723 aa12.56□□□□□ -0.4
RAP1A-204ENST00000494982 ALS2Q96Q42 1657 aa12.55□□□□□ -0.4
RAP1A-204ENST00000494982 YY1P25490 414 aa12.54□□□□□ -0.4
RAP1A-204ENST00000494982 PSME1Q06323 249 aa12.54□□□□□ -0.4
RAP1A-204ENST00000494982 EZH2Q15910 746 aaKnown RBP12.54□□□□□ -0.4
RAP1A-204ENST00000494982 TMEM132EQ6IEE7 984 aa12.54□□□□□ -0.4
RAP1A-204ENST00000494982 NUP188Q5SRE5 1749 aa12.54□□□□□ -0.4
RAP1A-204ENST00000494982 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
RAP1A-204ENST00000494982 BTG4Q9NY30 223 aa12.53□□□□□ -0.4
RAP1A-204ENST00000494982 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
RAP1A-204ENST00000494982 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
RAP1A-204ENST00000494982 ANKRD30BQ9BXX2 1392 aa12.53□□□□□ -0.4
RAP1A-204ENST00000494982 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
RAP1A-204ENST00000494982 ANKARQ7Z5J8 1434 aa12.52□□□□□ -0.41
RAP1A-204ENST00000494982 LMOD2Q6P5Q4 547 aa12.51□□□□□ -0.41
RAP1A-204ENST00000494982 SIRT1Q96EB6 747 aa12.5□□□□□ -0.41
RAP1A-204ENST00000494982 DLC1Q96QB1 1528 aa12.48□□□□□ -0.41
RAP1A-204ENST00000494982 TRIM37O94972 964 aa12.48□□□□□ -0.41
RAP1A-204ENST00000494982 TSPYL2Q9H2G4 693 aaPredicted RBP12.48□□□□□ -0.41
RAP1A-204ENST00000494982 RGL3Q3MIN7 710 aa12.47□□□□□ -0.41
RAP1A-204ENST00000494982 PMFBP1Q8TBY8 1022 aa12.47□□□□□ -0.41
RAP1A-204ENST00000494982 NINLQ9Y2I6 1382 aa12.46□□□□□ -0.41
RAP1A-204ENST00000494982 SPATA31A1Q5TZJ5 1347 aa12.46□□□□□ -0.41
RAP1A-204ENST00000494982 CAMTA1Q9Y6Y1 1673 aa12.46□□□□□ -0.41
RAP1A-204ENST00000494982 PHRF1Q9P1Y6 1649 aaKnown RBP12.46□□□□□ -0.41
RAP1A-204ENST00000494982 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
RAP1A-204ENST00000494982 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
RAP1A-204ENST00000494982 FAM196AQ6ZSG2 479 aa12.45□□□□□ -0.42
RAP1A-204ENST00000494982 PPARGC1BQ86YN6 1023 aaKnown RBP12.45□□□□□ -0.42
RAP1A-204ENST00000494982 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
RAP1A-204ENST00000494982 TULP4Q9NRJ4 1543 aa12.45□□□□□ -0.42
RAP1A-204ENST00000494982 PRR36Q9H6K5 1346 aa12.44□□□□□ -0.42
RAP1A-204ENST00000494982 APBA3O96018 575 aa12.44□□□□□ -0.42
RAP1A-204ENST00000494982 PHF12Q96QT6 1004 aa12.44□□□□□ -0.42
RAP1A-204ENST00000494982 C14orf93Q9H972 538 aaKnown RBP12.44□□□□□ -0.42
RAP1A-204ENST00000494982 GPRASP1Q5JY77 1395 aa12.43□□□□□ -0.42
RAP1A-204ENST00000494982 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
RAP1A-204ENST00000494982 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
RAP1A-204ENST00000494982 PRDM11Q9NQV5 511 aa12.43□□□□□ -0.42
RAP1A-204ENST00000494982 DHX57Q6P158 1386 aaKnown RBP12.43□□□□□ -0.42
RAP1A-204ENST00000494982 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
RAP1A-204ENST00000494982 CASZ1Q86V15 1759 aa12.42□□□□□ -0.42
RAP1A-204ENST00000494982 CFAP70Q5T0N1 1121 aa12.41□□□□□ -0.42
RAP1A-204ENST00000494982 SSH2Q76I76 1423 aa12.41□□□□□ -0.42
RAP1A-204ENST00000494982 NRKQ7Z2Y5 1582 aa12.41□□□□□ -0.42
RAP1A-204ENST00000494982 SPON1Q9HCB6 807 aa12.41□□□□□ -0.42
RAP1A-204ENST00000494982 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
RAP1A-204ENST00000494982 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
RAP1A-204ENST00000494982 UTRNP46939 3433 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms