RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 MORC1Q86VD1 984 aa14.91□□□□□ -0.02
PKP4-215ENST00000494945 LTBP4Q8N2S1 1624 aa14.91□□□□□ -0.02
PKP4-215ENST00000494945 FYB1O15117 783 aa14.9□□□□□ -0.02
PKP4-215ENST00000494945 CCDC184Q52MB2 194 aa14.9□□□□□ -0.02
PKP4-215ENST00000494945 CADPS2Q86UW7 1296 aa14.9□□□□□ -0.02
PKP4-215ENST00000494945 NGDNQ8NEJ9 315 aaKnown RBP14.9□□□□□ -0.02
PKP4-215ENST00000494945 PHF8Q9UPP1 1060 aa14.9□□□□□ -0.02
PKP4-215ENST00000494945 TTC21AQ8NDW8 1320 aa14.9□□□□□ -0.02
PKP4-215ENST00000494945 PMFBP1Q8TBY8 1022 aa14.89□□□□□ -0.03
PKP4-215ENST00000494945 ALS2Q96Q42 1657 aa14.89□□□□□ -0.03
PKP4-215ENST00000494945 TTC21BQ7Z4L5 1316 aa14.89□□□□□ -0.03
PKP4-215ENST00000494945 LTN1O94822 1766 aa14.88□□□□□ -0.03
PKP4-215ENST00000494945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.037e-7■□□□□ 9.5
PKP4-215ENST00000494945 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
PKP4-215ENST00000494945 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
PKP4-215ENST00000494945 NHSL1Q5SYE7 1610 aa14.87□□□□□ -0.03
PKP4-215ENST00000494945 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
PKP4-215ENST00000494945 OVOS2A0A0J9YW53 1432 aa14.86□□□□□ -0.03
PKP4-215ENST00000494945 OVOS2Q6IE36 1432 aa14.86□□□□□ -0.03
PKP4-215ENST00000494945 NME9Q86XW9 330 aa14.85□□□□□ -0.03
PKP4-215ENST00000494945 USP31Q70CQ4 1352 aa14.85□□□□□ -0.03
PKP4-215ENST00000494945 AEBP2Q6ZN18 517 aaPredicted RBP14.84□□□□□ -0.03
PKP4-215ENST00000494945 PNISRQ8TF01 805 aaKnown RBP14.84□□□□□ -0.03
PKP4-215ENST00000494945 COG3Q96JB2 828 aa14.83□□□□□ -0.04
PKP4-215ENST00000494945 YTHDC1Q96MU7 727 aaKnown RBP14.83□□□□□ -0.04
PKP4-215ENST00000494945 ORAI2Q96SN7 254 aa14.83□□□□□ -0.04
PKP4-215ENST00000494945 AATKQ6ZMQ8 1374 aa14.83□□□□□ -0.04
PKP4-215ENST00000494945 SMG6Q86US8 1419 aaKnown RBP14.83□□□□□ -0.04
PKP4-215ENST00000494945 CRYBG1Q9Y4K1 1723 aa14.82□□□□□ -0.04
PKP4-215ENST00000494945 INSRP06213 1382 aa14.82□□□□□ -0.04
PKP4-215ENST00000494945 PHRF1Q9P1Y6 1649 aaKnown RBP14.81□□□□□ -0.04
PKP4-215ENST00000494945 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
PKP4-215ENST00000494945 PSME1Q06323 249 aa14.81□□□□□ -0.04
PKP4-215ENST00000494945 FAM9BQ8IZU0 186 aa14.81□□□□□ -0.04
PKP4-215ENST00000494945 PEAK1Q9H792 1746 aa14.8□□□□□ -0.04
PKP4-215ENST00000494945 CFAP53Q96M91 514 aa14.8□□□□□ -0.04
PKP4-215ENST00000494945 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
PKP4-215ENST00000494945 CDK12Q9NYV4 1490 aaPredicted RBP14.8□□□□□ -0.04
PKP4-215ENST00000494945 ROBO1Q9Y6N7 1651 aa14.8□□□□□ -0.04
PKP4-215ENST00000494945 MTHFSP49914 203 aa14.79□□□□□ -0.04
PKP4-215ENST00000494945 PXDNQ92626 1479 aa14.79□□□□□ -0.04
PKP4-215ENST00000494945 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
PKP4-215ENST00000494945 NPHP3Q7Z494 1330 aa14.78□□□□□ -0.04
PKP4-215ENST00000494945 ABCA3Q99758 1704 aa14.78□□□□□ -0.04
PKP4-215ENST00000494945 SLIT3O75094 1523 aa14.77□□□□□ -0.04
PKP4-215ENST00000494945 BLMP54132 1417 aaPredicted RBP14.77□□□□□ -0.04
PKP4-215ENST00000494945 SBNO1A3KN83 1393 aa14.77□□□□□ -0.04
PKP4-215ENST00000494945 FOXO3O43524 673 aa14.77□□□□□ -0.05
PKP4-215ENST00000494945 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
PKP4-215ENST00000494945 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
PKP4-215ENST00000494945 NFAT5O94916 1531 aa14.76□□□□□ -0.05
PKP4-215ENST00000494945 PNPLA6Q8IY17 1366 aa14.76□□□□□ -0.05
PKP4-215ENST00000494945 RGPD5Q99666 1765 aa14.76□□□□□ -0.05
PKP4-215ENST00000494945 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.05
PKP4-215ENST00000494945 KRT28Q7Z3Y7 464 aa14.76□□□□□ -0.05
PKP4-215ENST00000494945 ABTB2Q8N961 1025 aa14.76□□□□□ -0.05
PKP4-215ENST00000494945 MED1Q15648 1581 aaPredicted RBP14.76□□□□□ -0.05
PKP4-215ENST00000494945 IQSEC2Q5JU85 1478 aa14.76□□□□□ -0.05
PKP4-215ENST00000494945 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
PKP4-215ENST00000494945 NLRP6P59044 892 aa14.75□□□□□ -0.05
PKP4-215ENST00000494945 BRINP3Q76B58 766 aa14.75□□□□□ -0.05
PKP4-215ENST00000494945 POLKQ9UBT6 870 aa14.75□□□□□ -0.05
PKP4-215ENST00000494945 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
PKP4-215ENST00000494945 TNS3Q68CZ2 1445 aa14.74□□□□□ -0.05
PKP4-215ENST00000494945 AHDC1Q5TGY3 1603 aaPredicted RBP14.74□□□□□ -0.05
PKP4-215ENST00000494945 HNRNPUQ00839 825 aaKnown RBP eCLIP14.73□□□□□ -0.05
PKP4-215ENST00000494945 KIF24Q5T7B8 1368 aa14.73□□□□□ -0.05
PKP4-215ENST00000494945 PHLPP1O60346 1717 aa14.72□□□□□ -0.05
PKP4-215ENST00000494945 DLG5Q8TDM6 1919 aa14.72□□□□□ -0.05
PKP4-215ENST00000494945 RGPD2P0DJD1 1756 aa14.71□□□□□ -0.05
PKP4-215ENST00000494945 XPCQ01831 940 aaPredicted RBP14.71□□□□□ -0.05
PKP4-215ENST00000494945 ADAMTS8Q9UP79 889 aa14.71□□□□□ -0.05
PKP4-215ENST00000494945 KCNH5Q8NCM2 988 aa14.7□□□□□ -0.06
PKP4-215ENST00000494945 NUDCQ9Y266 331 aa14.7□□□□□ -0.06
PKP4-215ENST00000494945 EMILIN1Q9Y6C2 1016 aa14.7□□□□□ -0.06
PKP4-215ENST00000494945 FAM208AQ9UK61 1670 aaKnown RBP14.7□□□□□ -0.06
PKP4-215ENST00000494945 ARHGEF10O15013 1369 aa14.7□□□□□ -0.06
PKP4-215ENST00000494945 COL18A1P39060 1754 aa14.7□□□□□ -0.06
PKP4-215ENST00000494945 USP19O94966 1318 aa14.69□□□□□ -0.06
PKP4-215ENST00000494945 DIAPH1O60610 1272 aaKnown RBP14.69□□□□□ -0.06
PKP4-215ENST00000494945 FBLN1P23142 703 aa14.69□□□□□ -0.06
PKP4-215ENST00000494945 RRS1Q15050 365 aaKnown RBP14.69□□□□□ -0.06
PKP4-215ENST00000494945 NUTM2GQ5VZR2 741 aa14.69□□□□□ -0.06
PKP4-215ENST00000494945 RTL1A6NKG5 1358 aa14.69□□□□□ -0.06
PKP4-215ENST00000494945 FLT4P35916 1363 aa14.69□□□□□ -0.06
PKP4-215ENST00000494945 COL22A1Q8NFW1 1626 aaPredicted RBP14.69□□□□□ -0.06
PKP4-215ENST00000494945 SOS2Q07890 1332 aaPredicted RBP14.68□□□□□ -0.06
PKP4-215ENST00000494945 SPATA31A3Q5VYP0 1347 aa14.68□□□□□ -0.06
PKP4-215ENST00000494945 ZBED9Q6R2W3 1325 aa14.68□□□□□ -0.06
PKP4-215ENST00000494945 ABCC6O95255 1503 aa14.68□□□□□ -0.06
PKP4-215ENST00000494945 PPM1GO15355 546 aaPredicted RBP14.68□□□□□ -0.06
PKP4-215ENST00000494945 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
PKP4-215ENST00000494945 DDX17Q92841 729 aaKnown RBP14.67□□□□□ -0.06
PKP4-215ENST00000494945 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
PKP4-215ENST00000494945 COL16A1Q07092 1604 aaPredicted RBP14.66□□□□□ -0.06
PKP4-215ENST00000494945 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
PKP4-215ENST00000494945 SOX12O15370 315 aa14.65□□□□□ -0.06
PKP4-215ENST00000494945 CAMTA1Q9Y6Y1 1673 aa14.65□□□□□ -0.06
PKP4-215ENST00000494945 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
PKP4-215ENST00000494945 IL13P35225 146 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms