RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 C8orf37Q96NL8 207 aa24.1■■□□□ 1.45
SNX17-209ENST00000494893 PUS7Q96PZ0 661 aaKnown RBP24.1■■□□□ 1.45
SNX17-209ENST00000494893 CD163L1Q9NR16 1453 aa24.1■■□□□ 1.45
SNX17-209ENST00000494893 CRYBG1Q9Y4K1 1723 aa24.1■■□□□ 1.45
SNX17-209ENST00000494893 AFF2P51816 1311 aa24.1■■□□□ 1.45
SNX17-209ENST00000494893 PLEKHG5O94827 1062 aa24.09■■□□□ 1.45
SNX17-209ENST00000494893 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
SNX17-209ENST00000494893 SLC12A5Q9H2X9 1139 aa24.07■■□□□ 1.44
SNX17-209ENST00000494893 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
SNX17-209ENST00000494893 BRD4O60885 1362 aaPredicted RBP24.05■■□□□ 1.44
SNX17-209ENST00000494893 NUTM2GQ5VZR2 741 aa24.05■■□□□ 1.44
SNX17-209ENST00000494893 NRKQ7Z2Y5 1582 aa24.04■■□□□ 1.44
SNX17-209ENST00000494893 HSPA5P11021 654 aaKnown RBP24.04■■□□□ 1.44
SNX17-209ENST00000494893 TMF1P82094 1093 aa24.04■■□□□ 1.44
SNX17-209ENST00000494893 NGLY1Q96IV0 654 aa24.04■■□□□ 1.44
SNX17-209ENST00000494893 SLC24A1O60721 1099 aa24.03■■□□□ 1.44
SNX17-209ENST00000494893 FNBP4Q8N3X1 1017 aaPredicted RBP24.03■■□□□ 1.44
SNX17-209ENST00000494893 TMC1Q8TDI8 760 aa24.02■■□□□ 1.44
SNX17-209ENST00000494893 ZNF692Q9BU19 519 aaPredicted RBP24.02■■□□□ 1.44
SNX17-209ENST00000494893 TTC21BQ7Z4L5 1316 aa24.02■■□□□ 1.44
SNX17-209ENST00000494893 MON2Q7Z3U7 1717 aa24.01■■□□□ 1.43
SNX17-209ENST00000494893 EIF4G2P78344 907 aaKnown RBP eCLIP24.01■■□□□ 1.43
SNX17-209ENST00000494893 ZNF772Q68DY9 489 aaPredicted RBP24.01■■□□□ 1.43
SNX17-209ENST00000494893 ABTB2Q8N961 1025 aa24.01■■□□□ 1.43
SNX17-209ENST00000494893 PHRF1Q9P1Y6 1649 aaKnown RBP24.01■■□□□ 1.43
SNX17-209ENST00000494893 USP19O94966 1318 aa24.01■■□□□ 1.43
SNX17-209ENST00000494893 PIK3C2AO00443 1686 aa24.01■■□□□ 1.43
SNX17-209ENST00000494893 KTN1Q86UP2 1357 aaKnown RBP24.01■■□□□ 1.43
SNX17-209ENST00000494893 BCL9LQ86UU0 1499 aa24■■□□□ 1.43
SNX17-209ENST00000494893 SLIT2O94813 1529 aa24■■□□□ 1.43
SNX17-209ENST00000494893 A0A1W2PP64 1363 aa24■■□□□ 1.43
SNX17-209ENST00000494893 HAP1P54257 671 aaPredicted RBP23.99■■□□□ 1.43
SNX17-209ENST00000494893 FAM83GA6ND36 823 aa23.97■■□□□ 1.43
SNX17-209ENST00000494893 USP21Q9UK80 565 aa23.97■■□□□ 1.43
SNX17-209ENST00000494893 NINLQ9Y2I6 1382 aa23.97■■□□□ 1.43
SNX17-209ENST00000494893 ATRNO75882 1429 aa23.94■■□□□ 1.42
SNX17-209ENST00000494893 TTC21AQ8NDW8 1320 aa23.94■■□□□ 1.42
SNX17-209ENST00000494893 HDGFL2Q7Z4V5 671 aaPredicted RBP23.94■■□□□ 1.42
SNX17-209ENST00000494893 NLRP13Q86W25 1043 aa23.94■■□□□ 1.42
SNX17-209ENST00000494893 QTRT2Q9H974 415 aaKnown RBP23.94■■□□□ 1.42
SNX17-209ENST00000494893 MYOM1P52179 1685 aa23.94■■□□□ 1.42
SNX17-209ENST00000494893 PLCH1Q4KWH8 1693 aa23.94■■□□□ 1.42
SNX17-209ENST00000494893 SLIT3O75094 1523 aa23.94■■□□□ 1.42
SNX17-209ENST00000494893 EDC4Q6P2E9 1401 aaKnown RBP23.93■■□□□ 1.42
SNX17-209ENST00000494893 NLRP6P59044 892 aa23.93■■□□□ 1.42
SNX17-209ENST00000494893 TERF2IPQ9NYB0 399 aa23.93■■□□□ 1.42
SNX17-209ENST00000494893 ZRANB1Q9UGI0 708 aa23.93■■□□□ 1.42
SNX17-209ENST00000494893 KIAA0232Q92628 1395 aa23.92■■□□□ 1.42
SNX17-209ENST00000494893 CDCA8Q53HL2 280 aa23.92■■□□□ 1.42
SNX17-209ENST00000494893 ANKRD36BQ8N2N9 1353 aa23.91■■□□□ 1.42
SNX17-209ENST00000494893 C11orf95C9JLR9 678 aaPredicted RBP23.91■■□□□ 1.42
SNX17-209ENST00000494893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.91■■□□□ 1.42
SNX17-209ENST00000494893 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.9■■□□□ 1.42
SNX17-209ENST00000494893 GCP02774 474 aa23.9■■□□□ 1.42
SNX17-209ENST00000494893 ZC3H6P61129 1189 aaKnown RBP23.9■■□□□ 1.42
SNX17-209ENST00000494893 NME9Q86XW9 330 aa23.9■■□□□ 1.42
SNX17-209ENST00000494893 UNC5CLQ8IV45 518 aa23.9■■□□□ 1.42
SNX17-209ENST00000494893 COL14A1Q05707 1796 aaKnown RBP23.9■■□□□ 1.42
SNX17-209ENST00000494893 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
SNX17-209ENST00000494893 USP31Q70CQ4 1352 aa23.89■■□□□ 1.41
SNX17-209ENST00000494893 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
SNX17-209ENST00000494893 CHRNA2Q15822 529 aa23.88■■□□□ 1.41
SNX17-209ENST00000494893 PRDM11Q9NQV5 511 aa23.88■■□□□ 1.41
SNX17-209ENST00000494893 TRPC5Q9UL62 973 aaPredicted RBP23.88■■□□□ 1.41
SNX17-209ENST00000494893 USP54Q70EL1 1684 aa23.88■■□□□ 1.41
SNX17-209ENST00000494893 CPDO75976 1380 aa23.88■■□□□ 1.41
SNX17-209ENST00000494893 RXRBP28702 533 aa23.87■■□□□ 1.41
SNX17-209ENST00000494893 RBM6P78332 1123 aaKnown RBP23.86■■□□□ 1.41
SNX17-209ENST00000494893 BTG4Q9NY30 223 aa23.86■■□□□ 1.41
SNX17-209ENST00000494893 NFAT5O94916 1531 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 LMO7Q8WWI1 1683 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 GLI3P10071 1580 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 CDK12Q9NYV4 1490 aaPredicted RBP23.84■■□□□ 1.41
SNX17-209ENST00000494893 CARD14Q9BXL6 1004 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 OVOS2A0A0J9YW53 1432 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 RGS12O14924 1447 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 OVOS2Q6IE36 1432 aa23.84■■□□□ 1.41
SNX17-209ENST00000494893 VPS72Q15906 364 aa23.82■■□□□ 1.4
SNX17-209ENST00000494893 CAMTA1Q9Y6Y1 1673 aa23.82■■□□□ 1.4
SNX17-209ENST00000494893 SOCS7O14512 581 aa23.81■■□□□ 1.4
SNX17-209ENST00000494893 GJD4Q96KN9 370 aaPredicted RBP23.81■■□□□ 1.4
SNX17-209ENST00000494893 POLR3GLQ9BT43 218 aa23.81■■□□□ 1.4
SNX17-209ENST00000494893 SOX12O15370 315 aa23.79■■□□□ 1.4
SNX17-209ENST00000494893 ARHGEF25Q86VW2 580 aa23.79■■□□□ 1.4
SNX17-209ENST00000494893 COL18A1P39060 1754 aa23.78■■□□□ 1.4
SNX17-209ENST00000494893 AATKQ6ZMQ8 1374 aa23.78■■□□□ 1.4
SNX17-209ENST00000494893 FYB1O15117 783 aa23.77■■□□□ 1.4
SNX17-209ENST00000494893 KCNH5Q8NCM2 988 aa23.77■■□□□ 1.4
SNX17-209ENST00000494893 KIF7Q2M1P5 1343 aa23.77■■□□□ 1.4
SNX17-209ENST00000494893 NSD3Q9BZ95 1437 aa23.76■■□□□ 1.39
SNX17-209ENST00000494893 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
SNX17-209ENST00000494893 AXIN2Q9Y2T1 843 aa23.75■■□□□ 1.39
SNX17-209ENST00000494893 COL5A2P05997 1499 aaPredicted RBP23.74■■□□□ 1.39
SNX17-209ENST00000494893 GGNBP2Q9H3C7 697 aa23.73■■□□□ 1.39
SNX17-209ENST00000494893 SPATA31A5Q5VU36 1347 aa23.73■■□□□ 1.39
SNX17-209ENST00000494893 SPATA31A7Q8IWB4 1347 aa23.73■■□□□ 1.39
SNX17-209ENST00000494893 STRN4Q9NRL3 753 aa23.72■■□□□ 1.39
SNX17-209ENST00000494893 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
SNX17-209ENST00000494893 FBLN1P23142 703 aa23.71■■□□□ 1.39
SNX17-209ENST00000494893 COG3Q96JB2 828 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms