RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 NKTRP30414 1462 aaKnown RBP7.59□□□□□ -1.2
RUNX1-217ENST00000494829 CPSF1Q10570 1443 aaKnown RBP7.58□□□□□ -1.2
RUNX1-217ENST00000494829 NME9Q86XW9 330 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 CCDC136Q96JN2 1154 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 MED14O60244 1454 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 RGPD8O14715 1765 aaPredicted RBP7.58□□□□□ -1.2
RUNX1-217ENST00000494829 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
RUNX1-217ENST00000494829 ATP7BP35670 1465 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 PPIP5K1Q6PFW1 1433 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 ATAD2Q6PL18 1390 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 MON2Q7Z3U7 1717 aa7.58□□□□□ -1.2
RUNX1-217ENST00000494829 TECPR2O15040 1411 aa7.57□□□□□ -1.2
RUNX1-217ENST00000494829 AKAP12Q02952 1782 aa7.57□□□□□ -1.2
RUNX1-217ENST00000494829 WASLO00401 505 aaPredicted RBP7.57□□□□□ -1.2
RUNX1-217ENST00000494829 EMILIN1Q9Y6C2 1016 aa7.57□□□□□ -1.2
RUNX1-217ENST00000494829 TOPAZ1Q8N9V7 1692 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 NRKQ7Z2Y5 1582 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 POLKQ9UBT6 870 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 U2AF1L5P0DN76 240 aaPredicted RBP7.56□□□□□ -1.2
RUNX1-217ENST00000494829 TRHP20396 242 aaPredicted RBP7.56□□□□□ -1.2
RUNX1-217ENST00000494829 U2AF1Q01081 240 aaKnown RBP eCLIP7.56□□□□□ -1.2
RUNX1-217ENST00000494829 SAMD1Q6SPF0 538 aaPredicted RBP7.56□□□□□ -1.2
RUNX1-217ENST00000494829 NUDT16Q96DE0 195 aaKnown RBP7.56□□□□□ -1.2
RUNX1-217ENST00000494829 TRIM35Q9UPQ4 493 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 LRRC7Q96NW7 1537 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 NSD2O96028 1365 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 PNPLA6Q8IY17 1366 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 CDC42BPGQ6DT37 1551 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 RUNDC1Q96C34 613 aa7.56□□□□□ -1.2
RUNX1-217ENST00000494829 ESF1Q9H501 851 aaKnown RBP7.56□□□□□ -1.2
RUNX1-217ENST00000494829 ARHGAP23Q9P227 1491 aa7.55□□□□□ -1.2
RUNX1-217ENST00000494829 TSR2Q969E8 191 aaKnown RBP7.55□□□□□ -1.2
RUNX1-217ENST00000494829 RBM33Q96EV2 1170 aaKnown RBP7.55□□□□□ -1.2
RUNX1-217ENST00000494829 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
RUNX1-217ENST00000494829 NINLQ9Y2I6 1382 aa7.55□□□□□ -1.2
RUNX1-217ENST00000494829 PEAK1Q9H792 1746 aa7.55□□□□□ -1.2
RUNX1-217ENST00000494829 RRS1Q15050 365 aaKnown RBP7.54□□□□□ -1.2
RUNX1-217ENST00000494829 SLIT1O75093 1534 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 U2SURPO15042 1029 aaKnown RBP7.54□□□□□ -1.2
RUNX1-217ENST00000494829 RLBP1P12271 317 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 PHACTR3Q96KR7 559 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 PLEKHG1Q9ULL1 1385 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 FAM135BQ49AJ0 1406 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 TERF2IPQ9NYB0 399 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 KDM2BQ8NHM5 1336 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 ITSN1Q15811 1721 aa7.54□□□□□ -1.2
RUNX1-217ENST00000494829 PPM1GO15355 546 aaPredicted RBP7.53□□□□□ -1.2
RUNX1-217ENST00000494829 RIMS1Q86UR5 1692 aaKnown RBP7.53□□□□□ -1.2
RUNX1-217ENST00000494829 PANK1Q8TE04 598 aa7.53□□□□□ -1.2
RUNX1-217ENST00000494829 E9PSI1 815 aa7.53□□□□□ -1.2
RUNX1-217ENST00000494829 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.53□□□□□ -1.2
RUNX1-217ENST00000494829 THUMPD2Q9BTF0 503 aaKnown RBP7.53□□□□□ -1.2
RUNX1-217ENST00000494829 HMOX1P09601 288 aa7.52□□□□□ -1.21
RUNX1-217ENST00000494829 MARF1Q9Y4F3 1742 aaKnown RBP7.52□□□□□ -1.21
RUNX1-217ENST00000494829 DLG5Q8TDM6 1919 aa7.52□□□□□ -1.21
RUNX1-217ENST00000494829 HDGFL2Q7Z4V5 671 aaPredicted RBP7.52□□□□□ -1.21
RUNX1-217ENST00000494829 TMPOP42166 694 aaKnown RBP7.52□□□□□ -1.21
RUNX1-217ENST00000494829 RSPH6AQ9H0K4 717 aa7.52□□□□□ -1.21
RUNX1-217ENST00000494829 AMOTL2Q9Y2J4 779 aa7.52□□□□□ -1.21
RUNX1-217ENST00000494829 XRN1Q8IZH2 1706 aaKnown RBP7.52□□□□□ -1.21
RUNX1-217ENST00000494829 EDC4Q6P2E9 1401 aaKnown RBP7.52□□□□□ -1.21
RUNX1-217ENST00000494829 IGHDP01880 384 aa7.51□□□□□ -1.21
RUNX1-217ENST00000494829 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
RUNX1-217ENST00000494829 PMFBP1Q8TBY8 1022 aa7.51□□□□□ -1.21
RUNX1-217ENST00000494829 ACEP12821 1306 aa7.51□□□□□ -1.21
RUNX1-217ENST00000494829 IL13P35225 146 aa7.51□□□□□ -1.21
RUNX1-217ENST00000494829 CCDC61Q9Y6R9 512 aa7.51□□□□□ -1.21
RUNX1-217ENST00000494829 SSH2Q76I76 1423 aa7.51□□□□□ -1.21
RUNX1-217ENST00000494829 FANCIQ9NVI1 1328 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 NALCNQ8IZF0 1738 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 DIP2AQ14689 1571 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 CEP170BQ9Y4F5 1589 aaPredicted RBP7.5□□□□□ -1.21
RUNX1-217ENST00000494829 KCNA6P17658 529 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 CCDC27Q2M243 656 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 AEBP1Q8IUX7 1158 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 COG6Q9Y2V7 657 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 DIAPH1O60610 1272 aaKnown RBP7.5□□□□□ -1.21
RUNX1-217ENST00000494829 PRKAR2BP31323 418 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 SIRT1Q96EB6 747 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 CFAP53Q96M91 514 aa7.5□□□□□ -1.21
RUNX1-217ENST00000494829 PIK3C2AO00443 1686 aa7.49□□□□□ -1.21
RUNX1-217ENST00000494829 OVOS2A0A0J9YW53 1432 aa7.49□□□□□ -1.21
RUNX1-217ENST00000494829 OVOS2Q6IE36 1432 aa7.49□□□□□ -1.21
RUNX1-217ENST00000494829 FAM83GA6ND36 823 aa7.49□□□□□ -1.21
RUNX1-217ENST00000494829 SOX12O15370 315 aa7.49□□□□□ -1.21
RUNX1-217ENST00000494829 EXOSC9Q06265 439 aaKnown RBP7.48□□□□□ -1.21
RUNX1-217ENST00000494829 WDR63Q8IWG1 891 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 FRAT1Q92837 279 aaPredicted RBP7.48□□□□□ -1.21
RUNX1-217ENST00000494829 CLUAP1Q96AJ1 413 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 USP6P35125 1406 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 TTC21BQ7Z4L5 1316 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 PAK3O75914 559 aaPredicted RBP7.48□□□□□ -1.21
RUNX1-217ENST00000494829 RIPK4P57078 832 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 ADAMTSL3P82987 1691 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 DCTN1Q14203 1278 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 RGPD1P0DJD0 1748 aa7.48□□□□□ -1.21
RUNX1-217ENST00000494829 CDK12Q9NYV4 1490 aaPredicted RBP7.48□□□□□ -1.21
RUNX1-217ENST00000494829 PCDHB15Q9Y5E8 787 aa7.47□□□□□ -1.21
RUNX1-217ENST00000494829 HSP90AB2PQ58FF8 381 aa7.47□□□□□ -1.21
RUNX1-217ENST00000494829 TSPYL6Q8N831 410 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms