RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 FBXO3Q9UK99 471 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATG3-207ENST00000494571 MAP3K4Q9Y6R4 1608 aa4.96□□□□□ -1.62
ATG3-207ENST00000494571 SATB1Q01826 763 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 CHAF1AQ13111 956 aaPredicted RBP4.95□□□□□ -1.62
ATG3-207ENST00000494571 SKOR2Q2VWA4 1001 aaPredicted RBP4.95□□□□□ -1.62
ATG3-207ENST00000494571 ICE2Q659A1 982 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 PIK3R5Q8WYR1 880 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 GOLGA3Q08378 1498 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 GRIN2AQ12879 1464 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 GOLGA6L22H0YM25 854 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 RIOK3O14730 519 aaKnown RBP4.95□□□□□ -1.62
ATG3-207ENST00000494571 HSP90AB1P08238 724 aaKnown RBP4.95□□□□□ -1.62
ATG3-207ENST00000494571 BRPF1P55201 1214 aaPredicted RBP4.95□□□□□ -1.62
ATG3-207ENST00000494571 PLCB2Q00722 1185 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 HS1BP3Q53T59 392 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 SETD5Q9C0A6 1442 aa4.95□□□□□ -1.62
ATG3-207ENST00000494571 CLSTN1O94985 981 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 NOP2P46087 812 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 PRIM1P49642 420 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 MAP2K1Q02750 393 aaPredicted RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 NOLC1Q14978 699 aaKnown RBP eCLIP4.94□□□□□ -1.62
ATG3-207ENST00000494571 FBXO41Q8TF61 875 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 SGSM3Q96HU1 749 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 FEZ1Q99689 392 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 TTC12Q9H892 705 aaPredicted RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 BIVM-ERCC5R4GMW8 1640 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 PPRC1Q5VV67 1664 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 BIRC2Q13490 618 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 NAA30Q147X3 362 aaPredicted RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 PPP2R5AQ15172 486 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 PRPF38AQ8NAV1 312 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 PNISRQ8TF01 805 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 NOL10Q9BSC4 688 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 RBM27Q9P2N5 1060 aaKnown RBP4.94□□□□□ -1.62
ATG3-207ENST00000494571 PLB1Q6P1J6 1458 aa4.94□□□□□ -1.62
ATG3-207ENST00000494571 GOLGA6L6A8MZA4 724 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 ATMINO43313 823 aaPredicted RBP4.93□□□□□ -1.62
ATG3-207ENST00000494571 ATXN8OSP0DMR3 200 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 ARID4AP29374 1257 aaPredicted RBP4.93□□□□□ -1.62
ATG3-207ENST00000494571 ZNF513Q8N8E2 541 aaPredicted RBP4.93□□□□□ -1.62
ATG3-207ENST00000494571 TBC1D32Q96NH3 1257 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 SLC26A8Q96RN1 970 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 FHAD1B1AJZ9 1412 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 SNPHO15079 494 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 MCM5P33992 734 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 MCTP1Q6DN14 999 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 NEK11Q8NG66 645 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 SUFUQ9UMX1 484 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 CCDC7Q96M83 1385 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 HECW2Q9P2P5 1572 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 SSFA2P28290 1259 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 ZSCAN23Q3MJ62 389 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 SYT10Q6XYQ8 523 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 KRT222Q8N1A0 295 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 SSUH2Q9Y2M2 353 aa4.93□□□□□ -1.62
ATG3-207ENST00000494571 NPHP1O15259 732 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.92□□□□□ -1.62
ATG3-207ENST00000494571 V9GYY5 206 aaPredicted RBP4.92□□□□□ -1.62
ATG3-207ENST00000494571 CFAP43Q8NDM7 1665 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 KIF7Q2M1P5 1343 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 SYCE3A1L190 88 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 MPHOSPH10O00566 681 aaKnown RBP4.92□□□□□ -1.62
ATG3-207ENST00000494571 IGHDP01880 384 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 CT47B1P0C2W7 299 aaPredicted RBP4.92□□□□□ -1.62
ATG3-207ENST00000494571 GUCY2CP25092 1073 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 NBPF20Q3BBV1 942 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 LRCH2Q5VUJ6 765 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 PDLIM2Q96JY6 352 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 PSMD1Q99460 953 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 C22orf23Q9BZE7 217 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 CXorf56Q9H5V9 222 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 CTNNA3Q9UI47 895 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 JRKLQ9Y4A0 524 aa4.92□□□□□ -1.62
ATG3-207ENST00000494571 MAGI3Q5TCQ9 1506 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 NINLQ9Y2I6 1382 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 CASQ1P31415 396 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 TTLL5Q6EMB2 1281 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 DEF6Q9H4E7 631 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 PRDM16Q9HAZ2 1276 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 DIAPH3Q9NSV4 1193 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 LCMT1Q9UIC8 334 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 DDX41Q9UJV9 622 aaKnown RBP4.91□□□□□ -1.62
ATG3-207ENST00000494571 MYO1CO00159 1063 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 POLR3GO15318 223 aaPredicted RBP4.91□□□□□ -1.62
ATG3-207ENST00000494571 ZNF853P0CG23 659 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 NCBP1Q09161 790 aaKnown RBP4.91□□□□□ -1.62
ATG3-207ENST00000494571 KRBA2Q6ZNG9 492 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 CCDC191Q8NCU4 936 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 ANKRD7Q92527 254 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 GTF3C6Q969F1 213 aa4.91□□□□□ -1.62
ATG3-207ENST00000494571 CUL7Q14999 1698 aa4.9□□□□□ -1.62
ATG3-207ENST00000494571 KLHL40Q2TBA0 621 aa4.9□□□□□ -1.62
ATG3-207ENST00000494571 FOXD4L5Q5VV16 416 aaPredicted RBP4.9□□□□□ -1.62
ATG3-207ENST00000494571 GOLGA6L1Q8N7Z2 621 aa4.9□□□□□ -1.62
ATG3-207ENST00000494571 FOXD4L4Q8WXT5 416 aaPredicted RBP4.9□□□□□ -1.62
ATG3-207ENST00000494571 PIBF1Q8WXW3 757 aa4.9□□□□□ -1.62
ATG3-207ENST00000494571 RTF1Q92541 710 aaKnown RBP4.9□□□□□ -1.62
ATG3-207ENST00000494571 ADAMTSL3P82987 1691 aa4.9□□□□□ -1.63
ATG3-207ENST00000494571 CTR9Q6PD62 1173 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms