RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.26■□□□□ 0.83
PDZRN3-211ENST00000494559 AKAP12Q02952 1782 aa20.26■□□□□ 0.83
PDZRN3-211ENST00000494559 WDR63Q8IWG1 891 aa20.26■□□□□ 0.83
PDZRN3-211ENST00000494559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.26■□□□□ 0.83
PDZRN3-211ENST00000494559 PLEKHF1Q96S99 279 aa20.25■□□□□ 0.83
PDZRN3-211ENST00000494559 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
PDZRN3-211ENST00000494559 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
PDZRN3-211ENST00000494559 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.25■□□□□ 0.83
PDZRN3-211ENST00000494559 PTPRUQ92729 1446 aa20.24■□□□□ 0.83
PDZRN3-211ENST00000494559 EID1Q9Y6B2 187 aa20.23■□□□□ 0.83
PDZRN3-211ENST00000494559 PRR36Q9H6K5 1346 aa20.23■□□□□ 0.83
PDZRN3-211ENST00000494559 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
PDZRN3-211ENST00000494559 ITSN1Q15811 1721 aa20.23■□□□□ 0.83
PDZRN3-211ENST00000494559 NCKAP5LQ9HCH0 1330 aa20.23■□□□□ 0.83
PDZRN3-211ENST00000494559 U2SURPO15042 1029 aaKnown RBP20.22■□□□□ 0.83
PDZRN3-211ENST00000494559 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
PDZRN3-211ENST00000494559 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
PDZRN3-211ENST00000494559 TOPAZ1Q8N9V7 1692 aa20.21■□□□□ 0.83
PDZRN3-211ENST00000494559 BCAR3O75815 825 aa20.2■□□□□ 0.82
PDZRN3-211ENST00000494559 SLC26A8Q96RN1 970 aa20.2■□□□□ 0.82
PDZRN3-211ENST00000494559 THEMISQ8N1K5 641 aaPredicted RBP20.19■□□□□ 0.82
PDZRN3-211ENST00000494559 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
PDZRN3-211ENST00000494559 NME9Q86XW9 330 aa20.18■□□□□ 0.82
PDZRN3-211ENST00000494559 DIP2AQ14689 1571 aa20.18■□□□□ 0.82
PDZRN3-211ENST00000494559 FBLN1P23142 703 aa20.18■□□□□ 0.82
PDZRN3-211ENST00000494559 ZNF692Q9BU19 519 aaPredicted RBP20.18■□□□□ 0.82
PDZRN3-211ENST00000494559 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
PDZRN3-211ENST00000494559 AATKQ6ZMQ8 1374 aa20.17■□□□□ 0.82
PDZRN3-211ENST00000494559 FANCIQ9NVI1 1328 aa20.17■□□□□ 0.82
PDZRN3-211ENST00000494559 TMPOP42166 694 aaKnown RBP20.17■□□□□ 0.82
PDZRN3-211ENST00000494559 ZRANB1Q9UGI0 708 aa20.16■□□□□ 0.82
PDZRN3-211ENST00000494559 NRKQ7Z2Y5 1582 aa20.16■□□□□ 0.82
PDZRN3-211ENST00000494559 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
PDZRN3-211ENST00000494559 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
PDZRN3-211ENST00000494559 TRIM35Q9UPQ4 493 aa20.14■□□□□ 0.81
PDZRN3-211ENST00000494559 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
PDZRN3-211ENST00000494559 MAPK8IP3Q9UPT6 1336 aa20.14■□□□□ 0.81
PDZRN3-211ENST00000494559 PLEKHG3A1L390 1219 aa20.14■□□□□ 0.81
PDZRN3-211ENST00000494559 PNNQ9H307 717 aaKnown RBP20.14■□□□□ 0.81
PDZRN3-211ENST00000494559 LRRC7Q96NW7 1537 aa20.13■□□□□ 0.81
PDZRN3-211ENST00000494559 FCHSD2O94868 740 aa20.13■□□□□ 0.81
PDZRN3-211ENST00000494559 RARSP54136 660 aaKnown RBP20.13■□□□□ 0.81
PDZRN3-211ENST00000494559 MYH16Q9H6N6 1097 aa20.13■□□□□ 0.81
PDZRN3-211ENST00000494559 KDM2BQ8NHM5 1336 aa20.13■□□□□ 0.81
PDZRN3-211ENST00000494559 CEP170BQ9Y4F5 1589 aaPredicted RBP20.13■□□□□ 0.81
PDZRN3-211ENST00000494559 XRN1Q8IZH2 1706 aaKnown RBP20.12■□□□□ 0.81
PDZRN3-211ENST00000494559 COG3Q96JB2 828 aa20.12■□□□□ 0.81
PDZRN3-211ENST00000494559 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
PDZRN3-211ENST00000494559 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
PDZRN3-211ENST00000494559 PDE3AQ14432 1141 aa20.11■□□□□ 0.81
PDZRN3-211ENST00000494559 RSPH6AQ9H0K4 717 aa20.11■□□□□ 0.81
PDZRN3-211ENST00000494559 RIMS1Q86UR5 1692 aaKnown RBP20.11■□□□□ 0.81
PDZRN3-211ENST00000494559 ACEP12821 1306 aa20.1■□□□□ 0.81
PDZRN3-211ENST00000494559 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
PDZRN3-211ENST00000494559 IL13P35225 146 aa20.09■□□□□ 0.81
PDZRN3-211ENST00000494559 IL16Q14005 1332 aa20.09■□□□□ 0.81
PDZRN3-211ENST00000494559 TTC21BQ7Z4L5 1316 aa20.09■□□□□ 0.81
PDZRN3-211ENST00000494559 USP6P35125 1406 aa20.08■□□□□ 0.81
PDZRN3-211ENST00000494559 RIPK4P57078 832 aa20.08■□□□□ 0.81
PDZRN3-211ENST00000494559 SSH2Q76I76 1423 aa20.07■□□□□ 0.8
PDZRN3-211ENST00000494559 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 PRKAR2BP31323 418 aa20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 CENPQQ7L2Z9 268 aaPredicted RBP20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 OVOS2A0A0J9YW53 1432 aa20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 OVOS2Q6IE36 1432 aa20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 NALCNQ8IZF0 1738 aa20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 CT47B1P0C2W7 299 aaPredicted RBP20.06■□□□□ 0.8
PDZRN3-211ENST00000494559 PIK3R4Q99570 1358 aa20.05■□□□□ 0.8
PDZRN3-211ENST00000494559 RRS1Q15050 365 aaKnown RBP20.05■□□□□ 0.8
PDZRN3-211ENST00000494559 RGPD8O14715 1765 aaPredicted RBP20.05■□□□□ 0.8
PDZRN3-211ENST00000494559 MS4A1P11836 297 aa20.04■□□□□ 0.8
PDZRN3-211ENST00000494559 TSR2Q969E8 191 aaKnown RBP20.04■□□□□ 0.8
PDZRN3-211ENST00000494559 ZNF142P52746 1687 aaPredicted RBP20.04■□□□□ 0.8
PDZRN3-211ENST00000494559 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
PDZRN3-211ENST00000494559 MSH5O43196 834 aa20.03■□□□□ 0.8
PDZRN3-211ENST00000494559 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
PDZRN3-211ENST00000494559 HMOX1P09601 288 aa20.03■□□□□ 0.8
PDZRN3-211ENST00000494559 CANXP27824 592 aaKnown RBP20.03■□□□□ 0.8
PDZRN3-211ENST00000494559 FRAT1Q92837 279 aaPredicted RBP20.02■□□□□ 0.8
PDZRN3-211ENST00000494559 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
PDZRN3-211ENST00000494559 EXOSC9Q06265 439 aaKnown RBP20.01■□□□□ 0.79
PDZRN3-211ENST00000494559 USP31Q70CQ4 1352 aa20.01■□□□□ 0.79
PDZRN3-211ENST00000494559 KCNA6P17658 529 aa20.01■□□□□ 0.79
PDZRN3-211ENST00000494559 NFE2L2Q16236 605 aa20.01■□□□□ 0.79
PDZRN3-211ENST00000494559 BCL2L13Q9BXK5 485 aa20■□□□□ 0.79
PDZRN3-211ENST00000494559 COG6Q9Y2V7 657 aa20■□□□□ 0.79
PDZRN3-211ENST00000494559 NEFMP07197 916 aa19.99■□□□□ 0.79
PDZRN3-211ENST00000494559 SKAP1Q86WV1 359 aa19.99■□□□□ 0.79
PDZRN3-211ENST00000494559 TTC21AQ8NDW8 1320 aa19.99■□□□□ 0.79
PDZRN3-211ENST00000494559 PEAK1Q9H792 1746 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 RLBP1P12271 317 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 ANKARQ7Z5J8 1434 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 FMN2Q9NZ56 1722 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 PMFBP1Q8TBY8 1022 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 CLUAP1Q96AJ1 413 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 TNNQ9UQP3 1299 aa19.98■□□□□ 0.79
PDZRN3-211ENST00000494559 DLG5Q8TDM6 1919 aa19.97■□□□□ 0.79
PDZRN3-211ENST00000494559 SETD1BQ9UPS6 1966 aaKnown RBP19.96■□□□□ 0.79
PDZRN3-211ENST00000494559 PDE4AP27815 886 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms