RNA–Protein interactions for RNA: ENST00000494511.5

PMP22-206, Transcript of peripheral myelin protein 22, humanhuman

TSL 1 (best) BASIC

Gene PMP22, Length 872 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-206ENST00000494511 ACEP12821 1306 aa20.61■□□□□ 0.89
PMP22-206ENST00000494511 SRCAPQ6ZRS2 3230 aa20.58■□□□□ 0.89
PMP22-206ENST00000494511 PLEKHG3A1L390 1219 aa20.58■□□□□ 0.89
PMP22-206ENST00000494511 PPIP5K1Q6PFW1 1433 aa20.58■□□□□ 0.88
PMP22-206ENST00000494511 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.58■□□□□ 0.88
PMP22-206ENST00000494511 SLIT2O94813 1529 aa20.58■□□□□ 0.88
PMP22-206ENST00000494511 NUTM2GQ5VZR2 741 aa20.57■□□□□ 0.88
PMP22-206ENST00000494511 UNC5CLQ8IV45 518 aa20.57■□□□□ 0.88
PMP22-206ENST00000494511 CARD11Q9BXL7 1154 aa20.57■□□□□ 0.88
PMP22-206ENST00000494511 POLR3AO14802 1390 aaPredicted RBP20.57■□□□□ 0.88
PMP22-206ENST00000494511 EVC2Q86UK5 1308 aa20.55■□□□□ 0.88
PMP22-206ENST00000494511 PLCH1Q4KWH8 1693 aa20.55■□□□□ 0.88
PMP22-206ENST00000494511 FAM83GA6ND36 823 aa20.55■□□□□ 0.88
PMP22-206ENST00000494511 GJD4Q96KN9 370 aaPredicted RBP20.54■□□□□ 0.88
PMP22-206ENST00000494511 CABP1Q9NZU7 370 aa20.54■□□□□ 0.88
PMP22-206ENST00000494511 PCGF6Q9BYE7 350 aa20.53■□□□□ 0.88
PMP22-206ENST00000494511 RALGAPBQ86X10 1494 aa20.53■□□□□ 0.88
PMP22-206ENST00000494511 CRYBG1Q9Y4K1 1723 aa20.52■□□□□ 0.88
PMP22-206ENST00000494511 CCDC9Q9Y3X0 531 aaKnown RBP20.51■□□□□ 0.87
PMP22-206ENST00000494511 NWD2Q9ULI1 1742 aa20.5■□□□□ 0.87
PMP22-206ENST00000494511 ABTB2Q8N961 1025 aa20.5■□□□□ 0.87
PMP22-206ENST00000494511 BTG4Q9NY30 223 aa20.49■□□□□ 0.87
PMP22-206ENST00000494511 GLI3P10071 1580 aa20.49■□□□□ 0.87
PMP22-206ENST00000494511 BRWD3Q6RI45 1802 aa20.48■□□□□ 0.87
PMP22-206ENST00000494511 VPS72Q15906 364 aa20.48■□□□□ 0.87
PMP22-206ENST00000494511 PRDM11Q9NQV5 511 aa20.48■□□□□ 0.87
PMP22-206ENST00000494511 PHRF1Q9P1Y6 1649 aaKnown RBP20.48■□□□□ 0.87
PMP22-206ENST00000494511 COL14A1Q05707 1796 aaKnown RBP20.47■□□□□ 0.87
PMP22-206ENST00000494511 ZC3H6P61129 1189 aaKnown RBP20.47■□□□□ 0.87
PMP22-206ENST00000494511 CHRNA2Q15822 529 aa20.46■□□□□ 0.87
PMP22-206ENST00000494511 CCDC125Q86Z20 511 aa20.46■□□□□ 0.87
PMP22-206ENST00000494511 ZRANB1Q9UGI0 708 aa20.46■□□□□ 0.87
PMP22-206ENST00000494511 KIAA0232Q92628 1395 aa20.46■□□□□ 0.87
PMP22-206ENST00000494511 USP6P35125 1406 aa20.44■□□□□ 0.86
PMP22-206ENST00000494511 NRAPQ86VF7 1730 aa20.44■□□□□ 0.86
PMP22-206ENST00000494511 NLRP13Q86W25 1043 aa20.42■□□□□ 0.86
PMP22-206ENST00000494511 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
PMP22-206ENST00000494511 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
PMP22-206ENST00000494511 A0A0G2JS52 829 aa20.4■□□□□ 0.86
PMP22-206ENST00000494511 BRD4O60885 1362 aaPredicted RBP20.4■□□□□ 0.86
PMP22-206ENST00000494511 USP19O94966 1318 aa20.4■□□□□ 0.86
PMP22-206ENST00000494511 NLRP6P59044 892 aa20.4■□□□□ 0.86
PMP22-206ENST00000494511 MYT1Q01538 1121 aa20.4■□□□□ 0.86
PMP22-206ENST00000494511 NRKQ7Z2Y5 1582 aa20.4■□□□□ 0.86
PMP22-206ENST00000494511 AKAP12Q02952 1782 aa20.39■□□□□ 0.86
PMP22-206ENST00000494511 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
PMP22-206ENST00000494511 TMC1Q8TDI8 760 aa20.39■□□□□ 0.85
PMP22-206ENST00000494511 STRN4Q9NRL3 753 aa20.39■□□□□ 0.85
PMP22-206ENST00000494511 BLMP54132 1417 aaPredicted RBP20.38■□□□□ 0.85
PMP22-206ENST00000494511 SSH2Q76I76 1423 aa20.38■□□□□ 0.85
PMP22-206ENST00000494511 ZBTB7CA1YPR0 619 aa20.38■□□□□ 0.85
PMP22-206ENST00000494511 GCP02774 474 aa20.38■□□□□ 0.85
PMP22-206ENST00000494511 FAM98CQ17RN3 349 aaKnown RBP20.38■□□□□ 0.85
PMP22-206ENST00000494511 ZNF692Q9BU19 519 aaPredicted RBP20.38■□□□□ 0.85
PMP22-206ENST00000494511 TTC21BQ7Z4L5 1316 aa20.37■□□□□ 0.85
PMP22-206ENST00000494511 PIK3C2AO00443 1686 aa20.37■□□□□ 0.85
PMP22-206ENST00000494511 KTN1Q86UP2 1357 aaKnown RBP20.36■□□□□ 0.85
PMP22-206ENST00000494511 SPATA31A5Q5VU36 1347 aa20.36■□□□□ 0.85
PMP22-206ENST00000494511 SPATA31A7Q8IWB4 1347 aa20.36■□□□□ 0.85
PMP22-206ENST00000494511 ONECUT3O60422 494 aaPredicted RBP20.35■□□□□ 0.85
PMP22-206ENST00000494511 CPSF1Q10570 1443 aaKnown RBP20.35■□□□□ 0.85
PMP22-206ENST00000494511 EVA1CP58658 441 aa20.34■□□□□ 0.85
PMP22-206ENST00000494511 TESK2Q96S53 571 aa20.34■□□□□ 0.85
PMP22-206ENST00000494511 SLC12A5Q9H2X9 1139 aa20.34■□□□□ 0.85
PMP22-206ENST00000494511 CPDO75976 1380 aa20.34■□□□□ 0.85
PMP22-206ENST00000494511 CLSPNQ9HAW4 1339 aa20.33■□□□□ 0.85
PMP22-206ENST00000494511 SOX12O15370 315 aa20.33■□□□□ 0.85
PMP22-206ENST00000494511 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.33■□□□□ 0.85
PMP22-206ENST00000494511 CCER1Q8TC90 406 aaPredicted RBP20.33■□□□□ 0.85
PMP22-206ENST00000494511 CAMTA1Q9Y6Y1 1673 aa20.32■□□□□ 0.84
PMP22-206ENST00000494511 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
PMP22-206ENST00000494511 USP35Q9P2H5 1018 aa20.32■□□□□ 0.84
PMP22-206ENST00000494511 MON2Q7Z3U7 1717 aa20.32■□□□□ 0.84
PMP22-206ENST00000494511 USP47Q96K76 1375 aa20.32■□□□□ 0.84
PMP22-206ENST00000494511 SLIT3O75094 1523 aa20.32■□□□□ 0.84
PMP22-206ENST00000494511 TTC21AQ8NDW8 1320 aa20.31■□□□□ 0.84
PMP22-206ENST00000494511 CD163L1Q9NR16 1453 aa20.3■□□□□ 0.84
PMP22-206ENST00000494511 SPATA31A1Q5TZJ5 1347 aa20.3■□□□□ 0.84
PMP22-206ENST00000494511 LMO7Q8WWI1 1683 aa20.3■□□□□ 0.84
PMP22-206ENST00000494511 LARP1Q6PKG0 1096 aaKnown RBP20.3■□□□□ 0.84
PMP22-206ENST00000494511 HDGFL2Q7Z4V5 671 aaPredicted RBP20.3■□□□□ 0.84
PMP22-206ENST00000494511 TIMELESSQ9UNS1 1208 aa20.3■□□□□ 0.84
PMP22-206ENST00000494511 LRP5O75197 1615 aa20.3■□□□□ 0.84
PMP22-206ENST00000494511 DEFB132Q7Z7B7 95 aa20.29■□□□□ 0.84
PMP22-206ENST00000494511 FAM182BQ5T319 152 aa20.27■□□□□ 0.84
PMP22-206ENST00000494511 NME9Q86XW9 330 aa20.27■□□□□ 0.84
PMP22-206ENST00000494511 PUS7Q96PZ0 661 aaKnown RBP20.27■□□□□ 0.84
PMP22-206ENST00000494511 TERF2IPQ9NYB0 399 aa20.27■□□□□ 0.84
PMP22-206ENST00000494511 A0A1W2PP64 1363 aa20.26■□□□□ 0.83
PMP22-206ENST00000494511 AATKQ6ZMQ8 1374 aa20.25■□□□□ 0.83
PMP22-206ENST00000494511 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
PMP22-206ENST00000494511 KCNH5Q8NCM2 988 aa20.25■□□□□ 0.83
PMP22-206ENST00000494511 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
PMP22-206ENST00000494511 COL5A2P05997 1499 aaPredicted RBP20.24■□□□□ 0.83
PMP22-206ENST00000494511 SLC24A1O60721 1099 aa20.24■□□□□ 0.83
PMP22-206ENST00000494511 TMF1P82094 1093 aa20.24■□□□□ 0.83
PMP22-206ENST00000494511 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
PMP22-206ENST00000494511 ARHGEF25Q86VW2 580 aa20.23■□□□□ 0.83
PMP22-206ENST00000494511 AXIN2Q9Y2T1 843 aa20.23■□□□□ 0.83
PMP22-206ENST00000494511 COL18A1P39060 1754 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms