RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
PHF3-205ENST00000494284 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
PHF3-205ENST00000494284 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
PHF3-205ENST00000494284 RARSP54136 660 aaKnown RBP16.05■□□□□ 0.16
PHF3-205ENST00000494284 NEFMP07197 916 aa16.05■□□□□ 0.16
PHF3-205ENST00000494284 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
PHF3-205ENST00000494284 PLEKHF1Q96S99 279 aa16.05■□□□□ 0.16
PHF3-205ENST00000494284 NLRP1Q9C000 1473 aa16.04■□□□□ 0.16
PHF3-205ENST00000494284 TRIM35Q9UPQ4 493 aa16.04■□□□□ 0.16
PHF3-205ENST00000494284 LTKP29376 864 aa16.04■□□□□ 0.16
PHF3-205ENST00000494284 MS4A1P11836 297 aa16.03■□□□□ 0.16
PHF3-205ENST00000494284 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
PHF3-205ENST00000494284 CENPQQ7L2Z9 268 aaPredicted RBP16.03■□□□□ 0.16
PHF3-205ENST00000494284 PHACTR3Q96KR7 559 aa16.03■□□□□ 0.16
PHF3-205ENST00000494284 ATAD2Q6PL18 1390 aa16.03■□□□□ 0.16
PHF3-205ENST00000494284 TMPOP42166 694 aaKnown RBP16.02■□□□□ 0.16
PHF3-205ENST00000494284 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
PHF3-205ENST00000494284 PHF23Q9BUL5 403 aaPredicted RBP16.02■□□□□ 0.15
PHF3-205ENST00000494284 RIPK4P57078 832 aa16.01■□□□□ 0.15
PHF3-205ENST00000494284 ELL2O00472 640 aaPredicted RBP16.01■□□□□ 0.15
PHF3-205ENST00000494284 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
PHF3-205ENST00000494284 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
PHF3-205ENST00000494284 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
PHF3-205ENST00000494284 PRR36Q9H6K5 1346 aa16■□□□□ 0.15
PHF3-205ENST00000494284 WASLO00401 505 aaPredicted RBP16■□□□□ 0.15
PHF3-205ENST00000494284 PRKAR2BP31323 418 aa16■□□□□ 0.15
PHF3-205ENST00000494284 PCDHB15Q9Y5E8 787 aa16■□□□□ 0.15
PHF3-205ENST00000494284 USP32Q8NFA0 1604 aa16■□□□□ 0.15
PHF3-205ENST00000494284 NRXN3Q9Y4C0 1643 aa16■□□□□ 0.15
PHF3-205ENST00000494284 PPIP5K1Q6PFW1 1433 aa15.99■□□□□ 0.15
PHF3-205ENST00000494284 MAPK8IP3Q9UPT6 1336 aa15.99■□□□□ 0.15
PHF3-205ENST00000494284 COL3A1P02461 1466 aaPredicted RBP15.99■□□□□ 0.15
PHF3-205ENST00000494284 C8orf34Q49A92 452 aa15.98■□□□□ 0.15
PHF3-205ENST00000494284 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
PHF3-205ENST00000494284 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
PHF3-205ENST00000494284 DAXXQ9UER7 740 aaPredicted RBP15.98■□□□□ 0.15
PHF3-205ENST00000494284 SETD1AO15047 1707 aaKnown RBP15.98■□□□□ 0.15
PHF3-205ENST00000494284 FAM83GA6ND36 823 aa15.97■□□□□ 0.15
PHF3-205ENST00000494284 DCTN1Q14203 1278 aa15.97■□□□□ 0.15
PHF3-205ENST00000494284 PMFBP1Q8TBY8 1022 aa15.96■□□□□ 0.15
PHF3-205ENST00000494284 NSD2O96028 1365 aa15.96■□□□□ 0.15
PHF3-205ENST00000494284 TNRQ92752 1358 aa15.96■□□□□ 0.15
PHF3-205ENST00000494284 CPS1P31327 1500 aa15.96■□□□□ 0.15
PHF3-205ENST00000494284 FAM161AQ3B820 660 aa15.96■□□□□ 0.14
PHF3-205ENST00000494284 WDR63Q8IWG1 891 aa15.96■□□□□ 0.14
PHF3-205ENST00000494284 SSH1Q8WYL5 1049 aa15.96■□□□□ 0.14
PHF3-205ENST00000494284 SEC24BO95487 1268 aa15.95■□□□□ 0.14
PHF3-205ENST00000494284 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
PHF3-205ENST00000494284 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
PHF3-205ENST00000494284 MAP2P11137 1827 aaKnown RBP15.94■□□□□ 0.14
PHF3-205ENST00000494284 TRHP20396 242 aaPredicted RBP15.94■□□□□ 0.14
PHF3-205ENST00000494284 AEBP1Q8IUX7 1158 aa15.94■□□□□ 0.14
PHF3-205ENST00000494284 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
PHF3-205ENST00000494284 TSPYL6Q8N831 410 aa15.92■□□□□ 0.14
PHF3-205ENST00000494284 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
PHF3-205ENST00000494284 LRRC7Q96NW7 1537 aa15.92■□□□□ 0.14
PHF3-205ENST00000494284 TRIM27P14373 513 aa15.92■□□□□ 0.14
PHF3-205ENST00000494284 NUTM2GQ5VZR2 741 aa15.92■□□□□ 0.14
PHF3-205ENST00000494284 MYH16Q9H6N6 1097 aa15.92■□□□□ 0.14
PHF3-205ENST00000494284 TMEM2Q9UHN6 1383 aa15.91■□□□□ 0.14
PHF3-205ENST00000494284 NOB1Q9ULX3 412 aaKnown RBP15.91■□□□□ 0.14
PHF3-205ENST00000494284 PDE3AQ14432 1141 aa15.91■□□□□ 0.14
PHF3-205ENST00000494284 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
PHF3-205ENST00000494284 CCDC61Q9Y6R9 512 aa15.91■□□□□ 0.14
PHF3-205ENST00000494284 KIF20BQ96Q89 1820 aa15.91■□□□□ 0.14
PHF3-205ENST00000494284 NINLQ9Y2I6 1382 aa15.91■□□□□ 0.14
PHF3-205ENST00000494284 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
PHF3-205ENST00000494284 ADGRB2O60241 1585 aa15.9■□□□□ 0.14
PHF3-205ENST00000494284 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
PHF3-205ENST00000494284 UBR1Q8IWV7 1749 aa15.89■□□□□ 0.13
PHF3-205ENST00000494284 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
PHF3-205ENST00000494284 ITPRIPQ8IWB1 547 aa15.89■□□□□ 0.13
PHF3-205ENST00000494284 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 ADAMTS13Q76LX8 1427 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 ACEP12821 1306 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 PNPLA6Q8IY17 1366 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 IL13P35225 146 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 COG3Q96JB2 828 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 HDGFP51858 240 aaKnown RBP15.88■□□□□ 0.13
PHF3-205ENST00000494284 CPSF1Q10570 1443 aaKnown RBP15.88■□□□□ 0.13
PHF3-205ENST00000494284 PTPRUQ92729 1446 aa15.88■□□□□ 0.13
PHF3-205ENST00000494284 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
PHF3-205ENST00000494284 ANKRD26Q9UPS8 1709 aa15.87■□□□□ 0.13
PHF3-205ENST00000494284 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
PHF3-205ENST00000494284 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
PHF3-205ENST00000494284 SPRYD3Q8NCJ5 442 aa15.87■□□□□ 0.13
PHF3-205ENST00000494284 C1orf115Q9H7X2 142 aa15.87■□□□□ 0.13
PHF3-205ENST00000494284 AMOTL2Q9Y2J4 779 aa15.86■□□□□ 0.13
PHF3-205ENST00000494284 ZKSCAN2Q63HK3 967 aa15.86■□□□□ 0.13
PHF3-205ENST00000494284 DZIP1LQ8IYY4 767 aaKnown RBP15.86■□□□□ 0.13
PHF3-205ENST00000494284 DDRGK1Q96HY6 314 aa15.86■□□□□ 0.13
PHF3-205ENST00000494284 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.86■□□□□ 0.13
PHF3-205ENST00000494284 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
PHF3-205ENST00000494284 ATP7BP35670 1465 aa15.85■□□□□ 0.13
PHF3-205ENST00000494284 FCHSD2O94868 740 aa15.85■□□□□ 0.13
PHF3-205ENST00000494284 MVPQ14764 893 aaKnown RBP15.85■□□□□ 0.13
PHF3-205ENST00000494284 NFKBIBQ15653 356 aa15.85■□□□□ 0.13
PHF3-205ENST00000494284 SLKQ9H2G2 1235 aaPredicted RBP15.85■□□□□ 0.13
PHF3-205ENST00000494284 MIS18AQ9NYP9 233 aa15.84■□□□□ 0.13
PHF3-205ENST00000494284 MED14O60244 1454 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms