RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 SH3BP2P78314 561 aa12.03□□□□□ -0.48
MSL3-217ENST00000494268 SKOR1P84550 965 aa12.03□□□□□ -0.48
MSL3-217ENST00000494268 POM121Q96HA1 1249 aa12.03□□□□□ -0.48
MSL3-217ENST00000494268 GDPD2Q9HCC8 539 aa12.03□□□□□ -0.48
MSL3-217ENST00000494268 GPR37L1O60883 481 aa12.02□□□□□ -0.49
MSL3-217ENST00000494268 ARMC2Q8NEN0 867 aa12.02□□□□□ -0.49
MSL3-217ENST00000494268 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
MSL3-217ENST00000494268 ZNF511Q8NB15 262 aa12.01□□□□□ -0.49
MSL3-217ENST00000494268 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
MSL3-217ENST00000494268 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
MSL3-217ENST00000494268 ZNF697Q5TEC3 545 aa12□□□□□ -0.49
MSL3-217ENST00000494268 FOXJ1Q92949 421 aa12□□□□□ -0.49
MSL3-217ENST00000494268 COG6Q9Y2V7 657 aa12□□□□□ -0.49
MSL3-217ENST00000494268 APBB1O00213 710 aa11.99□□□□□ -0.49
MSL3-217ENST00000494268 RGS20O76081 388 aa11.99□□□□□ -0.49
MSL3-217ENST00000494268 CLUAP1Q96AJ1 413 aa11.98□□□□□ -0.49
MSL3-217ENST00000494268 ABL2P42684 1182 aa11.97□□□□□ -0.49
MSL3-217ENST00000494268 WNT7BP56706 349 aa11.97□□□□□ -0.49
MSL3-217ENST00000494268 NBPF14Q5TI25 921 aa11.97□□□□□ -0.49
MSL3-217ENST00000494268 FOXC1Q12948 553 aa11.96□□□□□ -0.49
MSL3-217ENST00000494268 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.49
MSL3-217ENST00000494268 RC3H1Q5TC82 1133 aaKnown RBP11.96□□□□□ -0.49
MSL3-217ENST00000494268 PDXDC2PQ6P474 469 aa11.96□□□□□ -0.49
MSL3-217ENST00000494268 PNMA1Q8ND90 353 aa11.96□□□□□ -0.49
MSL3-217ENST00000494268 PRM3Q9NNZ6 103 aa11.96□□□□□ -0.49
MSL3-217ENST00000494268 IRF5Q13568 498 aa11.95□□□□□ -0.5
MSL3-217ENST00000494268 AGERQ15109 404 aa11.95□□□□□ -0.5
MSL3-217ENST00000494268 SH3BP5LQ7L8J4 393 aa11.95□□□□□ -0.5
MSL3-217ENST00000494268 GPKOWQ92917 476 aaPredicted RBP eCLIP11.95□□□□□ -0.5
MSL3-217ENST00000494268 OCSTAMPQ9BR26 566 aa11.95□□□□□ -0.5
MSL3-217ENST00000494268 PKD2L1Q9P0L9 805 aa11.94□□□□□ -0.5
MSL3-217ENST00000494268 ZC3H4Q9UPT8 1303 aaKnown RBP11.93□□□□□ -0.5
MSL3-217ENST00000494268 RAD21O60216 631 aa11.93□□□□□ -0.5
MSL3-217ENST00000494268 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
MSL3-217ENST00000494268 SH3RF1Q7Z6J0 888 aa11.93□□□□□ -0.5
MSL3-217ENST00000494268 MAGEB6P1A0A0J9YX57 407 aa11.92□□□□□ -0.5
MSL3-217ENST00000494268 BPHLQ86WA6 291 aaPredicted RBP11.92□□□□□ -0.5
MSL3-217ENST00000494268 EHBP1Q8NDI1 1231 aa11.92□□□□□ -0.5
MSL3-217ENST00000494268 MRGPRX2Q96LB1 330 aa11.92□□□□□ -0.5
MSL3-217ENST00000494268 ARHGAP9Q9BRR9 750 aa11.92□□□□□ -0.5
MSL3-217ENST00000494268 CARD14Q9BXL6 1004 aa11.92□□□□□ -0.5
MSL3-217ENST00000494268 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
MSL3-217ENST00000494268 WNT7AO00755 349 aa11.91□□□□□ -0.5
MSL3-217ENST00000494268 GDF9O60383 454 aa11.91□□□□□ -0.5
MSL3-217ENST00000494268 PTK2Q05397 1052 aa11.91□□□□□ -0.5
MSL3-217ENST00000494268 FBXO45P0C2W1 286 aa11.9□□□□□ -0.5
MSL3-217ENST00000494268 ZBBXA8MT70 800 aa11.89□□□□□ -0.51
MSL3-217ENST00000494268 GPSM3Q9Y4H4 160 aa11.89□□□□□ -0.51
MSL3-217ENST00000494268 VARSP26640 1264 aaKnown RBP11.88□□□□□ -0.51
MSL3-217ENST00000494268 ADAM32Q8TC27 787 aa11.88□□□□□ -0.51
MSL3-217ENST00000494268 SIAH2O43255 324 aa11.87□□□□□ -0.51
MSL3-217ENST00000494268 ZBTB33Q86T24 672 aa11.87□□□□□ -0.51
MSL3-217ENST00000494268 VAC14Q08AM6 782 aa11.86□□□□□ -0.51
MSL3-217ENST00000494268 NR1H3Q13133 447 aa11.86□□□□□ -0.51
MSL3-217ENST00000494268 ERFEQ4G0M1 354 aa11.86□□□□□ -0.51
MSL3-217ENST00000494268 C14orf37Q86TY3 774 aa11.85□□□□□ -0.51
MSL3-217ENST00000494268 FNBP4Q8N3X1 1017 aaPredicted RBP11.85□□□□□ -0.51
MSL3-217ENST00000494268 C1QTNF2Q9BXJ5 285 aa11.85□□□□□ -0.51
MSL3-217ENST00000494268 PDZRN3Q9UPQ7 1066 aa11.85□□□□□ -0.51
MSL3-217ENST00000494268 A6NJR5 290 aa11.84□□□□□ -0.51
MSL3-217ENST00000494268 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
MSL3-217ENST00000494268 ZMYND15Q9H091 742 aa11.84□□□□□ -0.51
MSL3-217ENST00000494268 PROSER2Q86WR7 435 aaPredicted RBP11.83□□□□□ -0.52
MSL3-217ENST00000494268 TLL2Q9Y6L7 1015 aa11.83□□□□□ -0.52
MSL3-217ENST00000494268 PRR20EP86478 221 aa11.82□□□□□ -0.52
MSL3-217ENST00000494268 PRR20CP86479 221 aa11.82□□□□□ -0.52
MSL3-217ENST00000494268 PRR20DP86480 221 aa11.82□□□□□ -0.52
MSL3-217ENST00000494268 PRR20BP86481 221 aa11.82□□□□□ -0.52
MSL3-217ENST00000494268 PRR20AP86496 221 aa11.82□□□□□ -0.52
MSL3-217ENST00000494268 ARID5BQ14865 1188 aa11.82□□□□□ -0.52
MSL3-217ENST00000494268 WASHC4Q2M389 1173 aa11.81□□□□□ -0.52
MSL3-217ENST00000494268 TOR4AQ9NXH8 423 aa11.81□□□□□ -0.52
MSL3-217ENST00000494268 POM121CA8CG34 1229 aa11.8□□□□□ -0.52
MSL3-217ENST00000494268 TRMT44Q8IYL2 757 aaKnown RBP11.8□□□□□ -0.52
MSL3-217ENST00000494268 CYP4X1Q8N118 509 aa11.8□□□□□ -0.52
MSL3-217ENST00000494268 SNIP1Q8TAD8 396 aaKnown RBP11.8□□□□□ -0.52
MSL3-217ENST00000494268 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
MSL3-217ENST00000494268 ZNF330Q9Y3S2 320 aaPredicted RBP11.8□□□□□ -0.52
MSL3-217ENST00000494268 TTC24A2A3L6 582 aaPredicted RBP11.79□□□□□ -0.52
MSL3-217ENST00000494268 J3QL48 77 aa11.79□□□□□ -0.52
MSL3-217ENST00000494268 GFRA3O60609 400 aa11.79□□□□□ -0.52
MSL3-217ENST00000494268 ALDH1A1P00352 501 aa11.79□□□□□ -0.52
MSL3-217ENST00000494268 DZIP3Q86Y13 1208 aaKnown RBP11.79□□□□□ -0.52
MSL3-217ENST00000494268 PCDHB9Q9Y5E1 797 aa11.79□□□□□ -0.52
MSL3-217ENST00000494268 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
MSL3-217ENST00000494268 CDK15Q96Q40 435 aa11.78□□□□□ -0.52
MSL3-217ENST00000494268 TRAK2O60296 914 aa11.77□□□□□ -0.53
MSL3-217ENST00000494268 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
MSL3-217ENST00000494268 GRM5P41594 1212 aa11.76□□□□□ -0.53
MSL3-217ENST00000494268 VASH1Q7L8A9 365 aaPredicted RBP11.76□□□□□ -0.53
MSL3-217ENST00000494268 MPNDQ8N594 471 aa11.76□□□□□ -0.53
MSL3-217ENST00000494268 SMPD1P17405 629 aa11.75□□□□□ -0.53
MSL3-217ENST00000494268 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
MSL3-217ENST00000494268 ZNF777Q9ULD5 760 aaPredicted RBP11.74□□□□□ -0.53
MSL3-217ENST00000494268 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
MSL3-217ENST00000494268 MAP4K5Q9Y4K4 846 aa11.73□□□□□ -0.53
MSL3-217ENST00000494268 GIGYF1O75420 1035 aaPredicted RBP11.72□□□□□ -0.53
MSL3-217ENST00000494268 ADH1CP00326 375 aa11.72□□□□□ -0.53
MSL3-217ENST00000494268 ADAMTS19Q8TE59 1207 aa11.72□□□□□ -0.53
MSL3-217ENST00000494268 IRX2Q9BZI1 471 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms