RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 TERF2IPQ9NYB0 399 aa17.37■□□□□ 0.37
TRA2A-209ENST00000494255 USP6P35125 1406 aa17.37■□□□□ 0.37
TRA2A-209ENST00000494255 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
TRA2A-209ENST00000494255 KTN1Q86UP2 1357 aaKnown RBP17.36■□□□□ 0.37
TRA2A-209ENST00000494255 MEX3CQ5U5Q3 659 aaKnown RBP17.35■□□□□ 0.37
TRA2A-209ENST00000494255 POLR3GLQ9BT43 218 aa17.35■□□□□ 0.37
TRA2A-209ENST00000494255 CPSF1Q10570 1443 aaKnown RBP17.35■□□□□ 0.37
TRA2A-209ENST00000494255 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.37
TRA2A-209ENST00000494255 MON2Q7Z3U7 1717 aa17.33■□□□□ 0.36
TRA2A-209ENST00000494255 LRP6O75581 1613 aa17.33■□□□□ 0.36
TRA2A-209ENST00000494255 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
TRA2A-209ENST00000494255 CD163L1Q9NR16 1453 aa17.32■□□□□ 0.36
TRA2A-209ENST00000494255 ABTB2Q8N961 1025 aa17.32■□□□□ 0.36
TRA2A-209ENST00000494255 PHF23Q9BUL5 403 aaPredicted RBP17.31■□□□□ 0.36
TRA2A-209ENST00000494255 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
TRA2A-209ENST00000494255 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
TRA2A-209ENST00000494255 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
TRA2A-209ENST00000494255 ANKRD36BQ8N2N9 1353 aa17.3■□□□□ 0.36
TRA2A-209ENST00000494255 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
TRA2A-209ENST00000494255 MYOM1P52179 1685 aa17.3■□□□□ 0.36
TRA2A-209ENST00000494255 ADAMTS2O95450 1211 aa17.29■□□□□ 0.36
TRA2A-209ENST00000494255 NUTM2GQ5VZR2 741 aa17.29■□□□□ 0.36
TRA2A-209ENST00000494255 EDC4Q6P2E9 1401 aaKnown RBP17.29■□□□□ 0.36
TRA2A-209ENST00000494255 SSH2Q76I76 1423 aa17.29■□□□□ 0.36
TRA2A-209ENST00000494255 NLRP13Q86W25 1043 aa17.29■□□□□ 0.36
TRA2A-209ENST00000494255 CABLES1Q8TDN4 633 aa17.29■□□□□ 0.36
TRA2A-209ENST00000494255 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
TRA2A-209ENST00000494255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRA2A-209ENST00000494255 MARF1Q9Y4F3 1742 aaKnown RBP17.27■□□□□ 0.35
TRA2A-209ENST00000494255 C11orf95C9JLR9 678 aaPredicted RBP17.26■□□□□ 0.35
TRA2A-209ENST00000494255 NLRP6P59044 892 aa17.26■□□□□ 0.35
TRA2A-209ENST00000494255 C8orf37Q96NL8 207 aa17.26■□□□□ 0.35
TRA2A-209ENST00000494255 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
TRA2A-209ENST00000494255 CRYBG1Q9Y4K1 1723 aa17.25■□□□□ 0.35
TRA2A-209ENST00000494255 KIF7Q2M1P5 1343 aa17.25■□□□□ 0.35
TRA2A-209ENST00000494255 PHRF1Q9P1Y6 1649 aaKnown RBP17.24■□□□□ 0.35
TRA2A-209ENST00000494255 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
TRA2A-209ENST00000494255 USP19O94966 1318 aa17.24■□□□□ 0.35
TRA2A-209ENST00000494255 NME9Q86XW9 330 aa17.22■□□□□ 0.35
TRA2A-209ENST00000494255 AFF2P51816 1311 aa17.21■□□□□ 0.35
TRA2A-209ENST00000494255 CCDC7Q96M83 1385 aa17.21■□□□□ 0.35
TRA2A-209ENST00000494255 USP31Q70CQ4 1352 aa17.2■□□□□ 0.34
TRA2A-209ENST00000494255 NSD3Q9BZ95 1437 aa17.2■□□□□ 0.34
TRA2A-209ENST00000494255 SLIT3O75094 1523 aa17.2■□□□□ 0.34
TRA2A-209ENST00000494255 GCP02774 474 aa17.2■□□□□ 0.34
TRA2A-209ENST00000494255 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
TRA2A-209ENST00000494255 KCNH5Q8NCM2 988 aa17.19■□□□□ 0.34
TRA2A-209ENST00000494255 PRDM11Q9NQV5 511 aa17.19■□□□□ 0.34
TRA2A-209ENST00000494255 USP54Q70EL1 1684 aa17.19■□□□□ 0.34
TRA2A-209ENST00000494255 ZC3H6P61129 1189 aaKnown RBP17.18■□□□□ 0.34
TRA2A-209ENST00000494255 CARD14Q9BXL6 1004 aa17.18■□□□□ 0.34
TRA2A-209ENST00000494255 PANK3Q9H999 370 aa17.18■□□□□ 0.34
TRA2A-209ENST00000494255 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
TRA2A-209ENST00000494255 WASHC2AQ641Q2 1341 aa17.18■□□□□ 0.34
TRA2A-209ENST00000494255 KIAA0232Q92628 1395 aa17.17■□□□□ 0.34
TRA2A-209ENST00000494255 COG3Q96JB2 828 aa17.17■□□□□ 0.34
TRA2A-209ENST00000494255 RGS17Q9UGC6 210 aaPredicted RBP17.17■□□□□ 0.34
TRA2A-209ENST00000494255 KIF20BQ96Q89 1820 aa17.17■□□□□ 0.34
TRA2A-209ENST00000494255 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
TRA2A-209ENST00000494255 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 FNBP4Q8N3X1 1017 aaPredicted RBP17.16■□□□□ 0.34
TRA2A-209ENST00000494255 USP21Q9UK80 565 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 PLCH1Q4KWH8 1693 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 CGNL1Q0VF96 1302 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 SOX12O15370 315 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 OVOS2A0A0J9YW53 1432 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 OVOS2Q6IE36 1432 aa17.16■□□□□ 0.34
TRA2A-209ENST00000494255 CPDO75976 1380 aa17.15■□□□□ 0.34
TRA2A-209ENST00000494255 FYB1O15117 783 aa17.15■□□□□ 0.34
TRA2A-209ENST00000494255 NWD2Q9ULI1 1742 aa17.15■□□□□ 0.34
TRA2A-209ENST00000494255 SLIT2O94813 1529 aa17.14■□□□□ 0.34
TRA2A-209ENST00000494255 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
TRA2A-209ENST00000494255 GGNBP2Q9H3C7 697 aa17.14■□□□□ 0.33
TRA2A-209ENST00000494255 CHRNA2Q15822 529 aa17.13■□□□□ 0.33
TRA2A-209ENST00000494255 KNSTRNQ9Y448 316 aa17.13■□□□□ 0.33
TRA2A-209ENST00000494255 NFAT5O94916 1531 aa17.13■□□□□ 0.33
TRA2A-209ENST00000494255 BCL9LQ86UU0 1499 aa17.12■□□□□ 0.33
TRA2A-209ENST00000494255 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.12■□□□□ 0.33
TRA2A-209ENST00000494255 POTEAQ6S8J7 498 aa17.12■□□□□ 0.33
TRA2A-209ENST00000494255 UNC5CLQ8IV45 518 aa17.12■□□□□ 0.33
TRA2A-209ENST00000494255 QTRT2Q9H974 415 aaKnown RBP17.12■□□□□ 0.33
TRA2A-209ENST00000494255 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
TRA2A-209ENST00000494255 TRPC5Q9UL62 973 aaPredicted RBP17.12■□□□□ 0.33
TRA2A-209ENST00000494255 ARHGEF25Q86VW2 580 aa17.1■□□□□ 0.33
TRA2A-209ENST00000494255 AATKQ6ZMQ8 1374 aa17.1■□□□□ 0.33
TRA2A-209ENST00000494255 ATRNO75882 1429 aa17.09■□□□□ 0.33
TRA2A-209ENST00000494255 NSD2O96028 1365 aa17.08■□□□□ 0.32
TRA2A-209ENST00000494255 NRAPQ86VF7 1730 aa17.08■□□□□ 0.32
TRA2A-209ENST00000494255 LMO7Q8WWI1 1683 aa17.08■□□□□ 0.32
TRA2A-209ENST00000494255 LTN1O94822 1766 aa17.08■□□□□ 0.32
TRA2A-209ENST00000494255 ANKRD26Q9UPS8 1709 aa17.08■□□□□ 0.32
TRA2A-209ENST00000494255 RXRBP28702 533 aa17.07■□□□□ 0.32
TRA2A-209ENST00000494255 EVA1CP58658 441 aa17.07■□□□□ 0.32
TRA2A-209ENST00000494255 CCDC9Q9Y3X0 531 aaKnown RBP17.07■□□□□ 0.32
TRA2A-209ENST00000494255 STRN4Q9NRL3 753 aa17.07■□□□□ 0.32
TRA2A-209ENST00000494255 CAMTA1Q9Y6Y1 1673 aa17.06■□□□□ 0.32
TRA2A-209ENST00000494255 RBM6P78332 1123 aaKnown RBP17.06■□□□□ 0.32
TRA2A-209ENST00000494255 VPS72Q15906 364 aa17.06■□□□□ 0.32
TRA2A-209ENST00000494255 ABCC6O95255 1503 aa17.06■□□□□ 0.32
TRA2A-209ENST00000494255 COL18A1P39060 1754 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms