RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
CPSF7-213ENST00000494016 HECW1Q76N89 1606 aa8.8□□□□□ -1
CPSF7-213ENST00000494016 EHBP1L1Q8N3D4 1523 aa8.8□□□□□ -1
CPSF7-213ENST00000494016 ABCC2Q92887 1545 aa8.8□□□□□ -1
CPSF7-213ENST00000494016 PTPRKQ15262 1439 aa8.79□□□□□ -1
CPSF7-213ENST00000494016 TSPOAP1O95153 1857 aa8.79□□□□□ -1
CPSF7-213ENST00000494016 CFHP08603 1231 aa8.78□□□□□ -1
CPSF7-213ENST00000494016 MS4A1P11836 297 aa8.78□□□□□ -1
CPSF7-213ENST00000494016 BRPF1P55201 1214 aaPredicted RBP8.78□□□□□ -1
CPSF7-213ENST00000494016 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
CPSF7-213ENST00000494016 GPBP1L1Q9HC44 474 aaPredicted RBP8.78□□□□□ -1
CPSF7-213ENST00000494016 ZCCHC11Q5TAX3 1644 aaKnown RBP8.78□□□□□ -1
CPSF7-213ENST00000494016 PTPRGP23470 1445 aa8.78□□□□□ -1
CPSF7-213ENST00000494016 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
CPSF7-213ENST00000494016 CARMIL2Q6F5E8 1435 aa8.78□□□□□ -1
CPSF7-213ENST00000494016 PPRC1Q5VV67 1664 aaKnown RBP8.78□□□□□ -1
CPSF7-213ENST00000494016 CDK13Q14004 1512 aaKnown RBP8.77□□□□□ -1.01
CPSF7-213ENST00000494016 GCGRP47871 477 aa8.77□□□□□ -1.01
CPSF7-213ENST00000494016 APLP1P51693 650 aa8.77□□□□□ -1.01
CPSF7-213ENST00000494016 KMT5BQ4FZB7 885 aa8.77□□□□□ -1.01
CPSF7-213ENST00000494016 DIEXFQ68CQ4 756 aaKnown RBP8.77□□□□□ -1.01
CPSF7-213ENST00000494016 ERICH6Q7L0X2 663 aa8.77□□□□□ -1.01
CPSF7-213ENST00000494016 PRR14Q9BWN1 585 aa8.77□□□□□ -1.01
CPSF7-213ENST00000494016 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
CPSF7-213ENST00000494016 NEUROD2Q15784 382 aa8.76□□□□□ -1.01
CPSF7-213ENST00000494016 UHRF1BP1LA0JNW5 1464 aa8.76□□□□□ -1.01
CPSF7-213ENST00000494016 NUP153P49790 1475 aaKnown RBP8.76□□□□□ -1.01
CPSF7-213ENST00000494016 RAPGEF6Q8TEU7 1601 aa8.76□□□□□ -1.01
CPSF7-213ENST00000494016 ARID3CA6NKF2 412 aa8.75□□□□□ -1.01
CPSF7-213ENST00000494016 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
CPSF7-213ENST00000494016 PTPN23Q9H3S7 1636 aa8.75□□□□□ -1.01
CPSF7-213ENST00000494016 TCOF1Q13428 1488 aaKnown RBP8.75□□□□□ -1.01
CPSF7-213ENST00000494016 UACAQ9BZF9 1416 aa8.74□□□□□ -1.01
CPSF7-213ENST00000494016 ABCA8O94911 1581 aa8.73□□□□□ -1.01
CPSF7-213ENST00000494016 ASXL2Q76L83 1435 aa8.73□□□□□ -1.01
CPSF7-213ENST00000494016 PLB1Q6P1J6 1458 aa8.73□□□□□ -1.01
CPSF7-213ENST00000494016 BEGAINQ9BUH8 593 aa8.73□□□□□ -1.01
CPSF7-213ENST00000494016 KDM5BQ9UGL1 1544 aa8.73□□□□□ -1.01
CPSF7-213ENST00000494016 KDM6BO15054 1643 aa8.72□□□□□ -1.01
CPSF7-213ENST00000494016 MIA2Q96PC5 1412 aa8.72□□□□□ -1.01
CPSF7-213ENST00000494016 GLI2P10070 1586 aa8.72□□□□□ -1.01
CPSF7-213ENST00000494016 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
CPSF7-213ENST00000494016 NAIPQ13075 1403 aa8.71□□□□□ -1.01
CPSF7-213ENST00000494016 KDM4AO75164 1064 aa8.71□□□□□ -1.02
CPSF7-213ENST00000494016 SIN3AQ96ST3 1273 aa8.71□□□□□ -1.02
CPSF7-213ENST00000494016 HFM1A2PYH4 1435 aa8.71□□□□□ -1.02
CPSF7-213ENST00000494016 USP46P62068 366 aa8.7□□□□□ -1.02
CPSF7-213ENST00000494016 FUT2Q10981 343 aa8.7□□□□□ -1.02
CPSF7-213ENST00000494016 FAM117AQ9C073 453 aa8.7□□□□□ -1.02
CPSF7-213ENST00000494016 CDK11AQ9UQ88 783 aaPredicted RBP8.7□□□□□ -1.02
CPSF7-213ENST00000494016 PCDHB3Q9Y5E6 796 aa8.7□□□□□ -1.02
CPSF7-213ENST00000494016 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
CPSF7-213ENST00000494016 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
CPSF7-213ENST00000494016 SPIRE2Q8WWL2 714 aa8.69□□□□□ -1.02
CPSF7-213ENST00000494016 DDRGK1Q96HY6 314 aa8.69□□□□□ -1.02
CPSF7-213ENST00000494016 LAPTM4AQ15012 233 aa8.68□□□□□ -1.02
CPSF7-213ENST00000494016 TJAP1Q5JTD0 557 aa8.68□□□□□ -1.02
CPSF7-213ENST00000494016 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
CPSF7-213ENST00000494016 TROQ12816 1431 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-213ENST00000494016 ATP10BO94823 1461 aa8.68□□□□□ -1.02
CPSF7-213ENST00000494016 WDR7Q9Y4E6 1490 aa8.68□□□□□ -1.02
CPSF7-213ENST00000494016 PLEKHG3A1L390 1219 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 ITGBL1O95965 494 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-213ENST00000494016 NEUROD1Q13562 356 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 DIXDC1Q155Q3 683 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 GRIPAP1Q4V328 841 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 MORN1Q5T089 497 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 TRAF7Q6Q0C0 670 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 BLOC1S3Q6QNY0 202 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 MTRQ99707 1265 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 ZNF644Q9H582 1327 aaPredicted RBP8.67□□□□□ -1.02
CPSF7-213ENST00000494016 RRP7BPQ9NSQ0 103 aa8.67□□□□□ -1.02
CPSF7-213ENST00000494016 ABCC5O15440 1437 aa8.66□□□□□ -1.02
CPSF7-213ENST00000494016 HOXA2O43364 376 aa8.66□□□□□ -1.02
CPSF7-213ENST00000494016 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
CPSF7-213ENST00000494016 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
CPSF7-213ENST00000494016 GPATCH8Q9UKJ3 1502 aaKnown RBP8.65□□□□□ -1.02
CPSF7-213ENST00000494016 AKNAQ7Z591 1439 aa8.65□□□□□ -1.02
CPSF7-213ENST00000494016 PLEKHD1A6NEE1 506 aa8.65□□□□□ -1.02
CPSF7-213ENST00000494016 PPP1R15AO75807 674 aaPredicted RBP8.65□□□□□ -1.02
CPSF7-213ENST00000494016 COPS2P61201 443 aa8.65□□□□□ -1.02
CPSF7-213ENST00000494016 GTF3C3Q9Y5Q9 886 aa8.65□□□□□ -1.02
CPSF7-213ENST00000494016 GCC2Q8IWJ2 1684 aa8.65□□□□□ -1.03
CPSF7-213ENST00000494016 KIF14Q15058 1648 aa8.65□□□□□ -1.03
CPSF7-213ENST00000494016 NR1I2O75469 434 aa8.64□□□□□ -1.03
CPSF7-213ENST00000494016 COL17A1Q9UMD9 1497 aaPredicted RBP8.64□□□□□ -1.03
CPSF7-213ENST00000494016 DAPK1P53355 1430 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 DNMT1P26358 1616 aaKnown RBP8.63□□□□□ -1.03
CPSF7-213ENST00000494016 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 SCUBE3Q8IX30 993 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 IL27Q8NEV9 243 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 HLA-CQ95604 372 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 RSPH6AQ9H0K4 717 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 SLC27A5Q9Y2P5 690 aa8.63□□□□□ -1.03
CPSF7-213ENST00000494016 DENND4BO75064 1496 aaPredicted RBP8.63□□□□□ -1.03
CPSF7-213ENST00000494016 ZPR1O75312 459 aa8.62□□□□□ -1.03
CPSF7-213ENST00000494016 NDUFV2P19404 249 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms