RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 KRI1Q8N9T8 703 aaKnown RBP12.56□□□□□ -0.4
LRCH3-218ENST00000493726 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
LRCH3-218ENST00000493726 FAM9AQ8IZU1 332 aaPredicted RBP12.55□□□□□ -0.4
LRCH3-218ENST00000493726 ZC3H15Q8WU90 426 aaKnown RBP12.55□□□□□ -0.4
LRCH3-218ENST00000493726 ARAP3Q8WWN8 1544 aa12.54□□□□□ -0.4
LRCH3-218ENST00000493726 ANKLE1Q8NAG6 615 aa12.54□□□□□ -0.4
LRCH3-218ENST00000493726 THAP11Q96EK4 314 aa12.54□□□□□ -0.4
LRCH3-218ENST00000493726 SLC19A1P41440 591 aa12.53□□□□□ -0.4
LRCH3-218ENST00000493726 PLA2G2CQ5R387 149 aa12.53□□□□□ -0.4
LRCH3-218ENST00000493726 ZMYND10O75800 440 aa12.52□□□□□ -0.41
LRCH3-218ENST00000493726 REPIN1Q9BWE0 567 aaKnown RBP12.52□□□□□ -0.41
LRCH3-218ENST00000493726 PHLDB1Q86UU1 1377 aa12.52□□□□□ -0.41
LRCH3-218ENST00000493726 FMN1Q68DA7 1419 aa12.52□□□□□ -0.41
LRCH3-218ENST00000493726 RNF19BQ6ZMZ0 732 aa12.51□□□□□ -0.41
LRCH3-218ENST00000493726 LIAT1Q6ZQX7 453 aa12.51□□□□□ -0.41
LRCH3-218ENST00000493726 BARGINQ6ZT62 677 aa12.51□□□□□ -0.41
LRCH3-218ENST00000493726 HLA-CQ95604 372 aa12.51□□□□□ -0.41
LRCH3-218ENST00000493726 GPCPD1Q9NPB8 672 aa12.51□□□□□ -0.41
LRCH3-218ENST00000493726 FMNL1O95466 1100 aaPredicted RBP12.5□□□□□ -0.41
LRCH3-218ENST00000493726 FAM160A2Q8N612 972 aaPredicted RBP12.5□□□□□ -0.41
LRCH3-218ENST00000493726 PRDM9Q9NQV7 894 aa12.5□□□□□ -0.41
LRCH3-218ENST00000493726 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
LRCH3-218ENST00000493726 NEO1Q92859 1461 aa12.49□□□□□ -0.41
LRCH3-218ENST00000493726 KDM4AO75164 1064 aa12.49□□□□□ -0.41
LRCH3-218ENST00000493726 CLCN1P35523 988 aa12.49□□□□□ -0.41
LRCH3-218ENST00000493726 FAM217BQ9NTX9 383 aaPredicted RBP12.49□□□□□ -0.41
LRCH3-218ENST00000493726 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
LRCH3-218ENST00000493726 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
LRCH3-218ENST00000493726 GRIPAP1Q4V328 841 aa12.47□□□□□ -0.41
LRCH3-218ENST00000493726 SPRYD7Q5W111 196 aa12.47□□□□□ -0.41
LRCH3-218ENST00000493726 BRICD5Q6PL45 260 aa12.47□□□□□ -0.41
LRCH3-218ENST00000493726 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
LRCH3-218ENST00000493726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.47□□□□□ -0.41
LRCH3-218ENST00000493726 LAPTM4AQ15012 233 aa12.46□□□□□ -0.41
LRCH3-218ENST00000493726 NRG2O14511 850 aaPredicted RBP12.45□□□□□ -0.42
LRCH3-218ENST00000493726 UBTFP17480 764 aaKnown RBP12.45□□□□□ -0.42
LRCH3-218ENST00000493726 GUCA2AQ02747 115 aa12.45□□□□□ -0.42
LRCH3-218ENST00000493726 TRIM67Q6ZTA4 783 aa12.45□□□□□ -0.42
LRCH3-218ENST00000493726 CDK13Q14004 1512 aaKnown RBP12.45□□□□□ -0.42
LRCH3-218ENST00000493726 LRRIQ1Q96JM4 1722 aa12.45□□□□□ -0.42
LRCH3-218ENST00000493726 LCE2BO14633 110 aa12.44□□□□□ -0.42
LRCH3-218ENST00000493726 FCF1Q9Y324 198 aaKnown RBP12.44□□□□□ -0.42
LRCH3-218ENST00000493726 FRMPD1Q5SYB0 1578 aa12.43□□□□□ -0.42
LRCH3-218ENST00000493726 TTC37Q6PGP7 1564 aa12.43□□□□□ -0.42
LRCH3-218ENST00000493726 SALL2Q9Y467 1007 aaPredicted RBP12.43□□□□□ -0.42
LRCH3-218ENST00000493726 CASKIN1Q8WXD9 1431 aa12.43□□□□□ -0.42
LRCH3-218ENST00000493726 HOXA2O43364 376 aa12.42□□□□□ -0.42
LRCH3-218ENST00000493726 TTLL12Q14166 644 aaPredicted RBP12.42□□□□□ -0.42
LRCH3-218ENST00000493726 ZNF697Q5TEC3 545 aa12.42□□□□□ -0.42
LRCH3-218ENST00000493726 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
LRCH3-218ENST00000493726 PLEKHD1A6NEE1 506 aa12.41□□□□□ -0.42
LRCH3-218ENST00000493726 SSTR3P32745 418 aaPredicted RBP12.41□□□□□ -0.42
LRCH3-218ENST00000493726 CFAP74Q9C0B2 1584 aa12.41□□□□□ -0.42
LRCH3-218ENST00000493726 FYCO1Q9BQS8 1478 aa12.4□□□□□ -0.43
LRCH3-218ENST00000493726 PCF11O94913 1555 aaKnown RBP12.39□□□□□ -0.43
LRCH3-218ENST00000493726 PLCH2O75038 1416 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 TROQ12816 1431 aaPredicted RBP12.39□□□□□ -0.43
LRCH3-218ENST00000493726 ZMYM4Q5VZL5 1548 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 ARID3CA6NKF2 412 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 USP46P62068 366 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 Q3C1V9 767 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 RICTORQ6R327 1708 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 CCDC18Q5T9S5 1454 aa12.39□□□□□ -0.43
LRCH3-218ENST00000493726 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
LRCH3-218ENST00000493726 RANGAP1P46060 587 aaPredicted RBP12.38□□□□□ -0.43
LRCH3-218ENST00000493726 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
LRCH3-218ENST00000493726 SYMPKQ92797 1274 aaKnown RBP12.38□□□□□ -0.43
LRCH3-218ENST00000493726 CLIP1P30622 1438 aa12.37□□□□□ -0.43
LRCH3-218ENST00000493726 AMHR2Q16671 573 aa12.37□□□□□ -0.43
LRCH3-218ENST00000493726 TRAF7Q6Q0C0 670 aa12.37□□□□□ -0.43
LRCH3-218ENST00000493726 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
LRCH3-218ENST00000493726 FANCAO15360 1455 aa12.37□□□□□ -0.43
LRCH3-218ENST00000493726 AKNAQ7Z591 1439 aa12.37□□□□□ -0.43
LRCH3-218ENST00000493726 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
LRCH3-218ENST00000493726 KIF14Q15058 1648 aa12.36□□□□□ -0.43
LRCH3-218ENST00000493726 ARHGEF40Q8TER5 1519 aa12.34□□□□□ -0.43
LRCH3-218ENST00000493726 TRIM66O15016 1216 aa12.34□□□□□ -0.43
LRCH3-218ENST00000493726 MYO5CQ9NQX4 1742 aa12.34□□□□□ -0.43
LRCH3-218ENST00000493726 DENND4BO75064 1496 aaPredicted RBP12.34□□□□□ -0.43
LRCH3-218ENST00000493726 MAGI2Q86UL8 1455 aa12.34□□□□□ -0.43
LRCH3-218ENST00000493726 GDF9O60383 454 aa12.33□□□□□ -0.44
LRCH3-218ENST00000493726 FOXC1Q12948 553 aa12.33□□□□□ -0.44
LRCH3-218ENST00000493726 SPIRE2Q8WWL2 714 aa12.33□□□□□ -0.44
LRCH3-218ENST00000493726 CDK11AQ9UQ88 783 aaPredicted RBP12.33□□□□□ -0.44
LRCH3-218ENST00000493726 PARP9Q8IXQ6 854 aa12.32□□□□□ -0.44
LRCH3-218ENST00000493726 POGZQ7Z3K3 1410 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 RAPGEF3O95398 923 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 NDUFV2P19404 249 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 MMP16P51512 607 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 AK7Q96M32 723 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 PCDHGC3Q9UN70 934 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
LRCH3-218ENST00000493726 KDM5CP41229 1560 aa12.3□□□□□ -0.44
LRCH3-218ENST00000493726 PREX2Q70Z35 1606 aa12.3□□□□□ -0.44
LRCH3-218ENST00000493726 FDX1P10109 184 aa12.3□□□□□ -0.44
LRCH3-218ENST00000493726 RPIAP49247 311 aa12.3□□□□□ -0.44
LRCH3-218ENST00000493726 PRR20EP86478 221 aa12.3□□□□□ -0.44
LRCH3-218ENST00000493726 PRR20CP86479 221 aa12.3□□□□□ -0.44
LRCH3-218ENST00000493726 PRR20DP86480 221 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms