RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 RXRBP28702 533 aa9.85□□□□□ -0.83
TOP3A-207ENST00000493648 QTRT2Q9H974 415 aaKnown RBP9.85□□□□□ -0.83
TOP3A-207ENST00000493648 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
TOP3A-207ENST00000493648 USP21Q9UK80 565 aa9.85□□□□□ -0.83
TOP3A-207ENST00000493648 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
TOP3A-207ENST00000493648 FNBP4Q8N3X1 1017 aaPredicted RBP9.84□□□□□ -0.83
TOP3A-207ENST00000493648 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
TOP3A-207ENST00000493648 POLR3AO14802 1390 aaPredicted RBP9.84□□□□□ -0.83
TOP3A-207ENST00000493648 PPP4R3CPQ6ZMV5 832 aa9.83□□□□□ -0.84
TOP3A-207ENST00000493648 ZNF692Q9BU19 519 aaPredicted RBP9.83□□□□□ -0.84
TOP3A-207ENST00000493648 SBNO2Q9Y2G9 1366 aa9.83□□□□□ -0.84
TOP3A-207ENST00000493648 ST20-MTHFSA0A0A6YYL1 179 aa9.82□□□□□ -0.84
TOP3A-207ENST00000493648 RBM6P78332 1123 aaKnown RBP9.82□□□□□ -0.84
TOP3A-207ENST00000493648 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
TOP3A-207ENST00000493648 PUS7Q96PZ0 661 aaKnown RBP9.82□□□□□ -0.84
TOP3A-207ENST00000493648 TRPC5Q9UL62 973 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-207ENST00000493648 BRD4O60885 1362 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-207ENST00000493648 TRPM3Q9HCF6 1732 aaPredicted RBP9.82□□□□□ -0.84
TOP3A-207ENST00000493648 TOPAZ1Q8N9V7 1692 aa9.81□□□□□ -0.84
TOP3A-207ENST00000493648 ATAD2Q6PL18 1390 aa9.81□□□□□ -0.84
TOP3A-207ENST00000493648 NLRP13Q86W25 1043 aa9.81□□□□□ -0.84
TOP3A-207ENST00000493648 MARF1Q9Y4F3 1742 aaKnown RBP9.81□□□□□ -0.84
TOP3A-207ENST00000493648 FAM83GA6ND36 823 aa9.8□□□□□ -0.84
TOP3A-207ENST00000493648 NUTM2GQ5VZR2 741 aa9.8□□□□□ -0.84
TOP3A-207ENST00000493648 UNC5CLQ8IV45 518 aa9.8□□□□□ -0.84
TOP3A-207ENST00000493648 TMC1Q8TDI8 760 aa9.8□□□□□ -0.84
TOP3A-207ENST00000493648 ALS2Q96Q42 1657 aa9.8□□□□□ -0.84
TOP3A-207ENST00000493648 TMF1P82094 1093 aa9.79□□□□□ -0.84
TOP3A-207ENST00000493648 TESK2Q96S53 571 aa9.79□□□□□ -0.84
TOP3A-207ENST00000493648 USP47Q96K76 1375 aa9.78□□□□□ -0.84
TOP3A-207ENST00000493648 NLRP6P59044 892 aa9.78□□□□□ -0.84
TOP3A-207ENST00000493648 CDCA8Q53HL2 280 aa9.78□□□□□ -0.84
TOP3A-207ENST00000493648 HDGFL2Q7Z4V5 671 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-207ENST00000493648 GJD4Q96KN9 370 aaPredicted RBP9.78□□□□□ -0.84
TOP3A-207ENST00000493648 TERF2IPQ9NYB0 399 aa9.78□□□□□ -0.84
TOP3A-207ENST00000493648 USP6P35125 1406 aa9.78□□□□□ -0.84
TOP3A-207ENST00000493648 BCL9LQ86UU0 1499 aa9.78□□□□□ -0.84
TOP3A-207ENST00000493648 KTN1Q86UP2 1357 aaKnown RBP9.77□□□□□ -0.84
TOP3A-207ENST00000493648 SLC12A5Q9H2X9 1139 aa9.77□□□□□ -0.85
TOP3A-207ENST00000493648 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
TOP3A-207ENST00000493648 SLIT2O94813 1529 aa9.77□□□□□ -0.85
TOP3A-207ENST00000493648 ATRNO75882 1429 aa9.76□□□□□ -0.85
TOP3A-207ENST00000493648 GCP02774 474 aa9.76□□□□□ -0.85
TOP3A-207ENST00000493648 ZC3H6P61129 1189 aaKnown RBP9.76□□□□□ -0.85
TOP3A-207ENST00000493648 BTG4Q9NY30 223 aa9.76□□□□□ -0.85
TOP3A-207ENST00000493648 CCDC9Q9Y3X0 531 aaKnown RBP9.76□□□□□ -0.85
TOP3A-207ENST00000493648 CDK12Q9NYV4 1490 aaPredicted RBP9.76□□□□□ -0.85
TOP3A-207ENST00000493648 TTC21BQ7Z4L5 1316 aa9.76□□□□□ -0.85
TOP3A-207ENST00000493648 TTC21AQ8NDW8 1320 aa9.76□□□□□ -0.85
TOP3A-207ENST00000493648 ABCA3Q99758 1704 aa9.76□□□□□ -0.85
TOP3A-207ENST00000493648 CPSF1Q10570 1443 aaKnown RBP9.75□□□□□ -0.85
TOP3A-207ENST00000493648 VPS72Q15906 364 aa9.75□□□□□ -0.85
TOP3A-207ENST00000493648 NINLQ9Y2I6 1382 aa9.75□□□□□ -0.85
TOP3A-207ENST00000493648 SSH2Q76I76 1423 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.74□□□□□ -0.85
TOP3A-207ENST00000493648 NWD2Q9ULI1 1742 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 AKAP12Q02952 1782 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 COL14A1Q05707 1796 aaKnown RBP9.74□□□□□ -0.85
TOP3A-207ENST00000493648 EVA1CP58658 441 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 EIF4G2P78344 907 aaKnown RBP eCLIP9.74□□□□□ -0.85
TOP3A-207ENST00000493648 CHRNA2Q15822 529 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.74□□□□□ -0.85
TOP3A-207ENST00000493648 KCNH5Q8NCM2 988 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 RNF216Q9NWF9 866 aaPredicted RBP9.74□□□□□ -0.85
TOP3A-207ENST00000493648 USP19O94966 1318 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 KIAA0232Q92628 1395 aa9.74□□□□□ -0.85
TOP3A-207ENST00000493648 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
TOP3A-207ENST00000493648 CNKSR2Q8WXI2 1034 aa9.73□□□□□ -0.85
TOP3A-207ENST00000493648 PLCH1Q4KWH8 1693 aa9.73□□□□□ -0.85
TOP3A-207ENST00000493648 CRYBG1Q9Y4K1 1723 aa9.73□□□□□ -0.85
TOP3A-207ENST00000493648 PHRF1Q9P1Y6 1649 aaKnown RBP9.72□□□□□ -0.85
TOP3A-207ENST00000493648 ZBTB7CA1YPR0 619 aa9.72□□□□□ -0.85
TOP3A-207ENST00000493648 STRN4Q9NRL3 753 aa9.72□□□□□ -0.85
TOP3A-207ENST00000493648 CPDO75976 1380 aa9.72□□□□□ -0.85
TOP3A-207ENST00000493648 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
TOP3A-207ENST00000493648 RGS12O14924 1447 aa9.71□□□□□ -0.86
TOP3A-207ENST00000493648 EDC4Q6P2E9 1401 aaKnown RBP9.71□□□□□ -0.86
TOP3A-207ENST00000493648 CD163L1Q9NR16 1453 aa9.71□□□□□ -0.86
TOP3A-207ENST00000493648 MON2Q7Z3U7 1717 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 A0A0G2JS52 829 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 HSPA5P11021 654 aaKnown RBP9.7□□□□□ -0.86
TOP3A-207ENST00000493648 MYT1Q01538 1121 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 NME9Q86XW9 330 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 SEPT12Q8IYM1 358 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 SPATA31A5Q5VU36 1347 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 SPATA31A7Q8IWB4 1347 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 A0A1W2PP64 1363 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 USP31Q70CQ4 1352 aa9.7□□□□□ -0.86
TOP3A-207ENST00000493648 PIK3C2AO00443 1686 aa9.69□□□□□ -0.86
TOP3A-207ENST00000493648 SOX12O15370 315 aa9.69□□□□□ -0.86
TOP3A-207ENST00000493648 NRKQ7Z2Y5 1582 aa9.69□□□□□ -0.86
TOP3A-207ENST00000493648 UPF1Q92900 1129 aaKnown RBP eCLIP9.69□□□□□ -0.868e-9■■■■■ 37
TOP3A-207ENST00000493648 ZRANB1Q9UGI0 708 aa9.69□□□□□ -0.86
TOP3A-207ENST00000493648 GLI3P10071 1580 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 SLIT3O75094 1523 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 AATKQ6ZMQ8 1374 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 ANKRD36BQ8N2N9 1353 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 SPATA31A1Q5TZJ5 1347 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
TOP3A-207ENST00000493648 ARHGEF25Q86VW2 580 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms