RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
PTPRU-208ENST00000493601 CDK19Q9BWU1 502 aa24.06■■□□□ 1.44
PTPRU-208ENST00000493601 PHRF1Q9P1Y6 1649 aaKnown RBP24.06■■□□□ 1.44
PTPRU-208ENST00000493601 BLMP54132 1417 aaPredicted RBP24.05■■□□□ 1.44
PTPRU-208ENST00000493601 SEPT12Q8IYM1 358 aa24.05■■□□□ 1.44
PTPRU-208ENST00000493601 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
PTPRU-208ENST00000493601 BTG4Q9NY30 223 aa24.04■■□□□ 1.44
PTPRU-208ENST00000493601 QRICH2Q9H0J4 1663 aa24.04■■□□□ 1.44
PTPRU-208ENST00000493601 ONECUT3O60422 494 aaPredicted RBP24.03■■□□□ 1.44
PTPRU-208ENST00000493601 NBPF1Q3BBV0 1214 aa24.03■■□□□ 1.44
PTPRU-208ENST00000493601 CCDC61Q9Y6R9 512 aa24.01■■□□□ 1.43
PTPRU-208ENST00000493601 SRCAPQ6ZRS2 3230 aa24■■□□□ 1.43
PTPRU-208ENST00000493601 PRDM11Q9NQV5 511 aa23.99■■□□□ 1.43
PTPRU-208ENST00000493601 ZRANB1Q9UGI0 708 aa23.99■■□□□ 1.43
PTPRU-208ENST00000493601 ACEP12821 1306 aa23.99■■□□□ 1.43
PTPRU-208ENST00000493601 CENPJQ9HC77 1338 aaPredicted RBP23.99■■□□□ 1.43
PTPRU-208ENST00000493601 A0A0G2JS52 829 aa23.98■■□□□ 1.43
PTPRU-208ENST00000493601 MYT1Q01538 1121 aa23.98■■□□□ 1.43
PTPRU-208ENST00000493601 KRT27Q7Z3Y8 459 aa23.98■■□□□ 1.43
PTPRU-208ENST00000493601 PLEKHG3A1L390 1219 aa23.97■■□□□ 1.43
PTPRU-208ENST00000493601 TRPM1Q7Z4N2 1603 aa23.97■■□□□ 1.43
PTPRU-208ENST00000493601 KIAA0232Q92628 1395 aa23.96■■□□□ 1.43
PTPRU-208ENST00000493601 FAM98CQ17RN3 349 aaKnown RBP23.96■■□□□ 1.43
PTPRU-208ENST00000493601 NBPF8Q3BBV2 869 aa23.96■■□□□ 1.43
PTPRU-208ENST00000493601 NRKQ7Z2Y5 1582 aa23.95■■□□□ 1.43
PTPRU-208ENST00000493601 PPIP5K1Q6PFW1 1433 aa23.95■■□□□ 1.42
PTPRU-208ENST00000493601 SRPK2P78362 688 aaKnown RBP23.95■■□□□ 1.42
PTPRU-208ENST00000493601 SF3B2Q13435 895 aaKnown RBP23.95■■□□□ 1.42
PTPRU-208ENST00000493601 THSD7AQ9UPZ6 1657 aa23.95■■□□□ 1.42
PTPRU-208ENST00000493601 SPATA31A5Q5VU36 1347 aa23.94■■□□□ 1.42
PTPRU-208ENST00000493601 SPATA31A7Q8IWB4 1347 aa23.94■■□□□ 1.42
PTPRU-208ENST00000493601 L3MBTL2Q969R5 705 aa23.94■■□□□ 1.42
PTPRU-208ENST00000493601 NUTM2GQ5VZR2 741 aa23.91■■□□□ 1.42
PTPRU-208ENST00000493601 RGPD1P0DJD0 1748 aa23.9■■□□□ 1.42
PTPRU-208ENST00000493601 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
PTPRU-208ENST00000493601 CHRNA2Q15822 529 aa23.89■■□□□ 1.41
PTPRU-208ENST00000493601 ABTB2Q8N961 1025 aa23.89■■□□□ 1.41
PTPRU-208ENST00000493601 CABP2Q9NPB3 220 aa23.89■■□□□ 1.41
PTPRU-208ENST00000493601 USP19O94966 1318 aa23.88■■□□□ 1.41
PTPRU-208ENST00000493601 ZC3H6P61129 1189 aaKnown RBP23.88■■□□□ 1.41
PTPRU-208ENST00000493601 LMO7Q8WWI1 1683 aa23.87■■□□□ 1.41
PTPRU-208ENST00000493601 DEFB132Q7Z7B7 95 aa23.87■■□□□ 1.41
PTPRU-208ENST00000493601 SIN3AQ96ST3 1273 aa23.87■■□□□ 1.41
PTPRU-208ENST00000493601 ROCK2O75116 1388 aaKnown RBP23.87■■□□□ 1.41
PTPRU-208ENST00000493601 SPATA31A1Q5TZJ5 1347 aa23.86■■□□□ 1.41
PTPRU-208ENST00000493601 CPDO75976 1380 aa23.86■■□□□ 1.41
PTPRU-208ENST00000493601 STRN4Q9NRL3 753 aa23.85■■□□□ 1.41
PTPRU-208ENST00000493601 USP6P35125 1406 aa23.84■■□□□ 1.41
PTPRU-208ENST00000493601 SSH2Q76I76 1423 aa23.84■■□□□ 1.41
PTPRU-208ENST00000493601 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
PTPRU-208ENST00000493601 NLRP13Q86W25 1043 aa23.84■■□□□ 1.41
PTPRU-208ENST00000493601 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
PTPRU-208ENST00000493601 CAMTA1Q9Y6Y1 1673 aa23.83■■□□□ 1.4
PTPRU-208ENST00000493601 BAG6P46379 1132 aa23.82■■□□□ 1.4
PTPRU-208ENST00000493601 TNS1Q9HBL0 1735 aaKnown RBP23.81■■□□□ 1.4
PTPRU-208ENST00000493601 CABP1Q9NZU7 370 aa23.81■■□□□ 1.4
PTPRU-208ENST00000493601 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
PTPRU-208ENST00000493601 EVA1CP58658 441 aa23.8■■□□□ 1.4
PTPRU-208ENST00000493601 SLIT3O75094 1523 aa23.79■■□□□ 1.4
PTPRU-208ENST00000493601 AKAP12Q02952 1782 aa23.79■■□□□ 1.4
PTPRU-208ENST00000493601 GCP02774 474 aa23.79■■□□□ 1.4
PTPRU-208ENST00000493601 FAM182BQ5T319 152 aa23.77■■□□□ 1.4
PTPRU-208ENST00000493601 BARGINQ6ZT62 677 aa23.77■■□□□ 1.4
PTPRU-208ENST00000493601 USP35Q9P2H5 1018 aa23.77■■□□□ 1.4
PTPRU-208ENST00000493601 DISP2A7MBM2 1401 aa23.76■■□□□ 1.39
PTPRU-208ENST00000493601 COL5A2P05997 1499 aaPredicted RBP23.76■■□□□ 1.39
PTPRU-208ENST00000493601 LARP1Q6PKG0 1096 aaKnown RBP23.75■■□□□ 1.39
PTPRU-208ENST00000493601 NLRP6P59044 892 aa23.74■■□□□ 1.39
PTPRU-208ENST00000493601 PARP4Q9UKK3 1724 aaKnown RBP23.73■■□□□ 1.39
PTPRU-208ENST00000493601 FAM196AQ6ZSG2 479 aa23.73■■□□□ 1.39
PTPRU-208ENST00000493601 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
PTPRU-208ENST00000493601 LRP5O75197 1615 aa23.73■■□□□ 1.39
PTPRU-208ENST00000493601 THRAP3Q9Y2W1 955 aaKnown RBP23.72■■□□□ 1.39
PTPRU-208ENST00000493601 AATKQ6ZMQ8 1374 aa23.71■■□□□ 1.39
PTPRU-208ENST00000493601 SBNO2Q9Y2G9 1366 aa23.71■■□□□ 1.39
PTPRU-208ENST00000493601 ZNF692Q9BU19 519 aaPredicted RBP23.71■■□□□ 1.39
PTPRU-208ENST00000493601 CRB1P82279 1406 aa23.7■■□□□ 1.38
PTPRU-208ENST00000493601 EN1Q05925 392 aaPredicted RBP23.7■■□□□ 1.38
PTPRU-208ENST00000493601 MON2Q7Z3U7 1717 aa23.7■■□□□ 1.38
PTPRU-208ENST00000493601 PDE3BQ13370 1112 aa23.69■■□□□ 1.38
PTPRU-208ENST00000493601 COL18A1P39060 1754 aa23.69■■□□□ 1.38
PTPRU-208ENST00000493601 ZBTB7CA1YPR0 619 aa23.68■■□□□ 1.38
PTPRU-208ENST00000493601 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
PTPRU-208ENST00000493601 TONSLQ96HA7 1378 aa23.67■■□□□ 1.38
PTPRU-208ENST00000493601 TTC21BQ7Z4L5 1316 aa23.67■■□□□ 1.38
PTPRU-208ENST00000493601 TTC21AQ8NDW8 1320 aa23.67■■□□□ 1.38
PTPRU-208ENST00000493601 WNK3Q9BYP7 1800 aa23.67■■□□□ 1.38
PTPRU-208ENST00000493601 TRIM37O94972 964 aa23.66■■□□□ 1.38
PTPRU-208ENST00000493601 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
PTPRU-208ENST00000493601 KTN1Q86UP2 1357 aaKnown RBP23.65■■□□□ 1.38
PTPRU-208ENST00000493601 PARD3Q8TEW0 1356 aa23.65■■□□□ 1.38
PTPRU-208ENST00000493601 LRRC37A3O60309 1634 aa23.65■■□□□ 1.38
PTPRU-208ENST00000493601 KCNH5Q8NCM2 988 aa23.64■■□□□ 1.37
PTPRU-208ENST00000493601 PSDA5PKW4 1024 aaPredicted RBP23.63■■□□□ 1.37
PTPRU-208ENST00000493601 USP54Q70EL1 1684 aa23.63■■□□□ 1.37
PTPRU-208ENST00000493601 RREB1Q92766 1687 aa23.63■■□□□ 1.37
PTPRU-208ENST00000493601 NFAT5O94916 1531 aa23.63■■□□□ 1.37
PTPRU-208ENST00000493601 ABCC6O95255 1503 aa23.63■■□□□ 1.37
PTPRU-208ENST00000493601 RGPD5Q99666 1765 aa23.62■■□□□ 1.37
PTPRU-208ENST00000493601 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms