RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 KCNH2Q12809 1159 aa9.67□□□□□ -0.86
CLIP4-212ENST00000493551 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
CLIP4-212ENST00000493551 CCDC102AQ96A19 550 aa9.65□□□□□ -0.86
CLIP4-212ENST00000493551 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
CLIP4-212ENST00000493551 KLF16Q9BXK1 252 aaPredicted RBP9.64□□□□□ -0.87
CLIP4-212ENST00000493551 MAN1A2O60476 641 aa9.63□□□□□ -0.87
CLIP4-212ENST00000493551 FAM174AQ8TBP5 190 aa9.63□□□□□ -0.87
CLIP4-212ENST00000493551 GSK3AP49840 483 aa9.62□□□□□ -0.87
CLIP4-212ENST00000493551 DESI1Q6ICB0 168 aa9.62□□□□□ -0.87
CLIP4-212ENST00000493551 KRI1Q8N9T8 703 aaKnown RBP9.62□□□□□ -0.87
CLIP4-212ENST00000493551 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
CLIP4-212ENST00000493551 TULP1O00294 542 aaPredicted RBP9.61□□□□□ -0.87
CLIP4-212ENST00000493551 SPDYE5A6NIY4 337 aa9.6□□□□□ -0.87
CLIP4-212ENST00000493551 PPFIA3O75145 1194 aa9.6□□□□□ -0.87
CLIP4-212ENST00000493551 TMEM151AQ8N4L1 468 aa9.6□□□□□ -0.87
CLIP4-212ENST00000493551 CDK15Q96Q40 435 aa9.6□□□□□ -0.87
CLIP4-212ENST00000493551 RNF225M0QZC1 329 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-212ENST00000493551 ZIC2O95409 532 aaPredicted RBP9.59□□□□□ -0.87
CLIP4-212ENST00000493551 MTMR2Q13614 643 aa9.58□□□□□ -0.88
CLIP4-212ENST00000493551 C6orf118Q5T5N4 469 aa9.58□□□□□ -0.88
CLIP4-212ENST00000493551 SPIRE2Q8WWL2 714 aa9.58□□□□□ -0.88
CLIP4-212ENST00000493551 ZFAND3Q9H8U3 227 aa9.58□□□□□ -0.88
CLIP4-212ENST00000493551 UPP2O95045 317 aa9.57□□□□□ -0.88
CLIP4-212ENST00000493551 GDF11O95390 407 aa9.57□□□□□ -0.88
CLIP4-212ENST00000493551 NR5A1Q13285 461 aa9.57□□□□□ -0.88
CLIP4-212ENST00000493551 ITPKCQ96DU7 683 aa9.57□□□□□ -0.88
CLIP4-212ENST00000493551 NDUFV2P19404 249 aa9.56□□□□□ -0.88
CLIP4-212ENST00000493551 RASSF7Q02833 373 aa9.56□□□□□ -0.88
CLIP4-212ENST00000493551 ARID5BQ14865 1188 aa9.56□□□□□ -0.88
CLIP4-212ENST00000493551 MOXD2PA6NHM9 499 aa9.55□□□□□ -0.88
CLIP4-212ENST00000493551 BMP2P12643 396 aa9.55□□□□□ -0.88
CLIP4-212ENST00000493551 CTHP32929 405 aa9.55□□□□□ -0.88
CLIP4-212ENST00000493551 LINC00528Q8N1L1 170 aa9.55□□□□□ -0.88
CLIP4-212ENST00000493551 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
CLIP4-212ENST00000493551 NR3C2P08235 984 aa9.53□□□□□ -0.88
CLIP4-212ENST00000493551 FOXJ1Q92949 421 aa9.53□□□□□ -0.88
CLIP4-212ENST00000493551 SPTLC1O15269 473 aa9.52□□□□□ -0.89
CLIP4-212ENST00000493551 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
CLIP4-212ENST00000493551 MEIOBQ8N635 442 aa9.52□□□□□ -0.89
CLIP4-212ENST00000493551 SOS2Q07890 1332 aaPredicted RBP9.52□□□□□ -0.89
CLIP4-212ENST00000493551 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
CLIP4-212ENST00000493551 ADAMTS8Q9UP79 889 aa9.51□□□□□ -0.89
CLIP4-212ENST00000493551 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
CLIP4-212ENST00000493551 KRT76Q01546 638 aa9.5□□□□□ -0.89
CLIP4-212ENST00000493551 CNTNAP3BQ96NU0 1288 aa9.5□□□□□ -0.89
CLIP4-212ENST00000493551 CNTNAP3Q9BZ76 1288 aa9.5□□□□□ -0.89
CLIP4-212ENST00000493551 GJA5P36382 358 aa9.49□□□□□ -0.89
CLIP4-212ENST00000493551 GRM5P41594 1212 aa9.49□□□□□ -0.89
CLIP4-212ENST00000493551 AGERQ15109 404 aa9.49□□□□□ -0.89
CLIP4-212ENST00000493551 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-212ENST00000493551 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.89
CLIP4-212ENST00000493551 BPHLQ86WA6 291 aaPredicted RBP9.48□□□□□ -0.89
CLIP4-212ENST00000493551 GPR161Q8N6U8 529 aaKnown RBP9.47□□□□□ -0.89
CLIP4-212ENST00000493551 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
CLIP4-212ENST00000493551 MAP10Q9P2G4 905 aa9.47□□□□□ -0.89
CLIP4-212ENST00000493551 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
CLIP4-212ENST00000493551 TTLL12Q14166 644 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-212ENST00000493551 COL25A1Q9BXS0 654 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-212ENST00000493551 DNMT3AQ9Y6K1 912 aaPredicted RBP9.45□□□□□ -0.9
CLIP4-212ENST00000493551 CFAP99D6REC4 459 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 IGHA1P01876 353 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 FSHRP23945 695 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 PTSQ03393 145 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 DIXDC1Q155Q3 683 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 ZNF385CQ66K41 422 aaPredicted RBP9.44□□□□□ -0.9
CLIP4-212ENST00000493551 SVOPQ8N4V2 548 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
CLIP4-212ENST00000493551 RB1CC1Q8TDY2 1594 aa9.44□□□□□ -0.9
CLIP4-212ENST00000493551 TTLL8A6PVC2 850 aa9.43□□□□□ -0.9
CLIP4-212ENST00000493551 RSBN1LQ6PCB5 846 aaPredicted RBP9.43□□□□□ -0.9
CLIP4-212ENST00000493551 MAP4K5Q9Y4K4 846 aa9.43□□□□□ -0.9
CLIP4-212ENST00000493551 EMILIN1Q9Y6C2 1016 aa9.43□□□□□ -0.9
CLIP4-212ENST00000493551 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
CLIP4-212ENST00000493551 ZBTB3Q9H5J0 574 aa9.42□□□□□ -0.9
CLIP4-212ENST00000493551 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
CLIP4-212ENST00000493551 ARMC2Q8NEN0 867 aa9.41□□□□□ -0.9
CLIP4-212ENST00000493551 BEGAINQ9BUH8 593 aa9.41□□□□□ -0.9
CLIP4-212ENST00000493551 FOXK2Q01167 660 aa9.4□□□□□ -0.9
CLIP4-212ENST00000493551 GIGYF2Q6Y7W6 1299 aaKnown RBP9.4□□□□□ -0.9
CLIP4-212ENST00000493551 TBC1D2Q9BYX2 928 aa9.4□□□□□ -0.9
CLIP4-212ENST00000493551 PCDHB15Q9Y5E8 787 aa9.4□□□□□ -0.9
CLIP4-212ENST00000493551 HRCP23327 699 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 IRS1P35568 1242 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 AMHR2Q16671 573 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 PRPF38BQ5VTL8 546 aaKnown RBP9.39□□□□□ -0.91
CLIP4-212ENST00000493551 KANK3Q6NY19 840 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 VASH1Q7L8A9 365 aaPredicted RBP9.39□□□□□ -0.91
CLIP4-212ENST00000493551 SH3RF1Q7Z6J0 888 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 TRMT44Q8IYL2 757 aaKnown RBP9.39□□□□□ -0.91
CLIP4-212ENST00000493551 CCDC116Q8IYX3 515 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 CCDC155Q8N6L0 562 aa9.39□□□□□ -0.91
CLIP4-212ENST00000493551 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
CLIP4-212ENST00000493551 NBPF14Q5TI25 921 aa9.38□□□□□ -0.91
CLIP4-212ENST00000493551 KDM2AQ9Y2K7 1162 aa9.38□□□□□ -0.91
CLIP4-212ENST00000493551 FIGNL2A6NMB9 653 aa9.36□□□□□ -0.91
CLIP4-212ENST00000493551 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
CLIP4-212ENST00000493551 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
CLIP4-212ENST00000493551 SLC35F4A4IF30 521 aa9.35□□□□□ -0.91
CLIP4-212ENST00000493551 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms