RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 MYOM2P54296 1465 aa10.81□□□□□ -0.68
CAB39-206ENST00000493540 PXDNQ92626 1479 aa10.81□□□□□ -0.68
CAB39-206ENST00000493540 MS4A3Q96HJ5 214 aa10.8□□□□□ -0.68
CAB39-206ENST00000493540 AMOTL2Q9Y2J4 779 aa10.8□□□□□ -0.68
CAB39-206ENST00000493540 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
CAB39-206ENST00000493540 SPATA31E1Q6ZUB1 1445 aa10.79□□□□□ -0.68
CAB39-206ENST00000493540 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
CAB39-206ENST00000493540 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
CAB39-206ENST00000493540 ADGRB2O60241 1585 aa10.78□□□□□ -0.68
CAB39-206ENST00000493540 TRPM3Q9HCF6 1732 aaPredicted RBP10.78□□□□□ -0.68
CAB39-206ENST00000493540 USP32Q8NFA0 1604 aa10.77□□□□□ -0.68
CAB39-206ENST00000493540 NRXN1Q9ULB1 1477 aa10.77□□□□□ -0.69
CAB39-206ENST00000493540 NRAPQ86VF7 1730 aa10.77□□□□□ -0.69
CAB39-206ENST00000493540 ATF3P18847 181 aa10.76□□□□□ -0.69
CAB39-206ENST00000493540 NUTM2DQ5VT03 806 aaPredicted RBP10.76□□□□□ -0.69
CAB39-206ENST00000493540 ZNF772Q68DY9 489 aaPredicted RBP10.76□□□□□ -0.69
CAB39-206ENST00000493540 ALS2Q96Q42 1657 aa10.76□□□□□ -0.69
CAB39-206ENST00000493540 PIK3C2GO75747 1445 aa10.75□□□□□ -0.69
CAB39-206ENST00000493540 GLI3P10071 1580 aa10.75□□□□□ -0.69
CAB39-206ENST00000493540 SOS2Q07890 1332 aaPredicted RBP10.75□□□□□ -0.69
CAB39-206ENST00000493540 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
CAB39-206ENST00000493540 PAXIP1Q6ZW49 1069 aaPredicted RBP10.74□□□□□ -0.69
CAB39-206ENST00000493540 SPRYD3Q8NCJ5 442 aa10.74□□□□□ -0.69
CAB39-206ENST00000493540 UPF1Q92900 1129 aaKnown RBP eCLIP10.74□□□□□ -0.69
CAB39-206ENST00000493540 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
CAB39-206ENST00000493540 BCANQ96GW7 911 aa10.73□□□□□ -0.69
CAB39-206ENST00000493540 ATRNO75882 1429 aa10.73□□□□□ -0.69
CAB39-206ENST00000493540 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
CAB39-206ENST00000493540 AFF2P51816 1311 aa10.72□□□□□ -0.69
CAB39-206ENST00000493540 RPGRIP1LQ68CZ1 1315 aa10.72□□□□□ -0.69
CAB39-206ENST00000493540 ITSN1Q15811 1721 aa10.72□□□□□ -0.69
CAB39-206ENST00000493540 ARHGEF28Q8N1W1 1705 aaKnown RBP10.72□□□□□ -0.69
CAB39-206ENST00000493540 NKX1-1Q15270 411 aaPredicted RBP10.71□□□□□ -0.69
CAB39-206ENST00000493540 DLC1Q96QB1 1528 aa10.71□□□□□ -0.69
CAB39-206ENST00000493540 TMEM106CQ9BVX2 250 aa10.71□□□□□ -0.69
CAB39-206ENST00000493540 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
CAB39-206ENST00000493540 TOPAZ1Q8N9V7 1692 aa10.7□□□□□ -0.7
CAB39-206ENST00000493540 ADGRB1O14514 1584 aa10.7□□□□□ -0.7
CAB39-206ENST00000493540 BCL9LQ86UU0 1499 aa10.7□□□□□ -0.7
CAB39-206ENST00000493540 TIE1P35590 1138 aa10.7□□□□□ -0.7
CAB39-206ENST00000493540 C14orf37Q86TY3 774 aa10.7□□□□□ -0.7
CAB39-206ENST00000493540 LRRC59Q96AG4 307 aaKnown RBP10.7□□□□□ -0.7
CAB39-206ENST00000493540 OTUD5Q96G74 571 aa10.7□□□□□ -0.7
CAB39-206ENST00000493540 LRP5O75197 1615 aa10.69□□□□□ -0.7
CAB39-206ENST00000493540 SLIT2O94813 1529 aa10.69□□□□□ -0.7
CAB39-206ENST00000493540 TNS1Q9HBL0 1735 aaKnown RBP10.68□□□□□ -0.7
CAB39-206ENST00000493540 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
CAB39-206ENST00000493540 LRPPRCP42704 1394 aaKnown RBP10.67□□□□□ -0.7
CAB39-206ENST00000493540 ABCC11Q96J66 1382 aa10.67□□□□□ -0.7
CAB39-206ENST00000493540 ANKRD30BQ9BXX2 1392 aa10.67□□□□□ -0.7
CAB39-206ENST00000493540 RXRBP28702 533 aa10.67□□□□□ -0.7
CAB39-206ENST00000493540 DDX17Q92841 729 aaKnown RBP10.67□□□□□ -0.7
CAB39-206ENST00000493540 RYDENQ9NUL5 291 aaKnown RBP10.67□□□□□ -0.7
CAB39-206ENST00000493540 KIAA1210Q9ULL0 1709 aa10.67□□□□□ -0.7
CAB39-206ENST00000493540 CCDC144AA2RUR9 1427 aa10.67□□□□□ -0.7
CAB39-206ENST00000493540 PHRF1Q9P1Y6 1649 aaKnown RBP10.66□□□□□ -0.7
CAB39-206ENST00000493540 POTEMA6NI47 508 aa10.66□□□□□ -0.7
CAB39-206ENST00000493540 ZNF326Q5BKZ1 582 aaKnown RBP10.66□□□□□ -0.7
CAB39-206ENST00000493540 MEX3CQ5U5Q3 659 aaKnown RBP10.66□□□□□ -0.7
CAB39-206ENST00000493540 FNBP4Q8N3X1 1017 aaPredicted RBP10.66□□□□□ -0.7
CAB39-206ENST00000493540 THSD7AQ9UPZ6 1657 aa10.66□□□□□ -0.7
CAB39-206ENST00000493540 RGPD1P0DJD0 1748 aa10.65□□□□□ -0.7
CAB39-206ENST00000493540 TTLL13PA6NNM8 815 aa10.65□□□□□ -0.7
CAB39-206ENST00000493540 RBM6P78332 1123 aaKnown RBP10.65□□□□□ -0.7
CAB39-206ENST00000493540 YTHDC2Q9H6S0 1430 aaKnown RBP10.65□□□□□ -0.7
CAB39-206ENST00000493540 COL14A1Q05707 1796 aaKnown RBP10.65□□□□□ -0.71
CAB39-206ENST00000493540 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
CAB39-206ENST00000493540 ITGAEP38570 1179 aa10.64□□□□□ -0.71
CAB39-206ENST00000493540 GOLGA2Q08379 1002 aa10.64□□□□□ -0.71
CAB39-206ENST00000493540 EFCAB3Q8N7B9 438 aa10.64□□□□□ -0.71
CAB39-206ENST00000493540 ORAI2Q96SN7 254 aa10.64□□□□□ -0.71
CAB39-206ENST00000493540 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
CAB39-206ENST00000493540 ADGRF5Q8IZF2 1346 aa10.63□□□□□ -0.71
CAB39-206ENST00000493540 POTEB2H3BUK9 544 aa10.63□□□□□ -0.71
CAB39-206ENST00000493540 SOX12O15370 315 aa10.63□□□□□ -0.71
CAB39-206ENST00000493540 HAP1P54257 671 aaPredicted RBP10.63□□□□□ -0.71
CAB39-206ENST00000493540 TRIM52Q96A61 297 aa10.63□□□□□ -0.71
CAB39-206ENST00000493540 ATAD2Q6PL18 1390 aa10.63□□□□□ -0.71
CAB39-206ENST00000493540 PLEKHH1Q9ULM0 1364 aa10.63□□□□□ -0.71
CAB39-206ENST00000493540 NPHP3Q7Z494 1330 aa10.62□□□□□ -0.71
CAB39-206ENST00000493540 TNS3Q68CZ2 1445 aa10.62□□□□□ -0.71
CAB39-206ENST00000493540 WNK3Q9BYP7 1800 aa10.62□□□□□ -0.71
CAB39-206ENST00000493540 RALGAPBQ86X10 1494 aa10.61□□□□□ -0.71
CAB39-206ENST00000493540 ANKARQ7Z5J8 1434 aa10.61□□□□□ -0.71
CAB39-206ENST00000493540 NUTM2BA6NNL0 878 aaPredicted RBP10.61□□□□□ -0.71
CAB39-206ENST00000493540 NUTM2EB1AL46 878 aaPredicted RBP10.61□□□□□ -0.71
CAB39-206ENST00000493540 POTEGQ6S5H5 508 aa10.61□□□□□ -0.71
CAB39-206ENST00000493540 NUTM2AQ8IVF1 878 aaPredicted RBP10.61□□□□□ -0.71
CAB39-206ENST00000493540 C8orf37Q96NL8 207 aa10.61□□□□□ -0.71
CAB39-206ENST00000493540 RREB1Q92766 1687 aa10.6□□□□□ -0.71
CAB39-206ENST00000493540 TULP4Q9NRJ4 1543 aa10.6□□□□□ -0.71
CAB39-206ENST00000493540 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
CAB39-206ENST00000493540 QTRT2Q9H974 415 aaKnown RBP10.6□□□□□ -0.71
CAB39-206ENST00000493540 SIRT1Q96EB6 747 aa10.59□□□□□ -0.71
CAB39-206ENST00000493540 MFRPQ9BY79 579 aa10.59□□□□□ -0.71
CAB39-206ENST00000493540 SPATA31A3Q5VYP0 1347 aa10.58□□□□□ -0.71
CAB39-206ENST00000493540 RGPD3A6NKT7 1758 aaPredicted RBP10.58□□□□□ -0.72
CAB39-206ENST00000493540 RGPD4Q7Z3J3 1758 aa10.58□□□□□ -0.72
CAB39-206ENST00000493540 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
CAB39-206ENST00000493540 SBNO1A3KN83 1393 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms