RNA–Protein interactions for RNA: ENST00000493412.1

DMD-227, Transcript of dystrophin, humanhuman

TSL 2

Gene DMD, Length 616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-227ENST00000493412 F12P00748 615 aaPredicted RBP9.07□□□□□ -0.96
DMD-227ENST00000493412 NEUROD2Q15784 382 aa9.07□□□□□ -0.96
DMD-227ENST00000493412 QPCTQ16769 361 aa9.06□□□□□ -0.96
DMD-227ENST00000493412 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
DMD-227ENST00000493412 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
DMD-227ENST00000493412 BAP1Q92560 729 aa9.06□□□□□ -0.96
DMD-227ENST00000493412 ATP13A2Q9NQ11 1180 aa9.06□□□□□ -0.96
DMD-227ENST00000493412 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
DMD-227ENST00000493412 MAP10Q9P2G4 905 aa9.05□□□□□ -0.96
DMD-227ENST00000493412 PER1O15534 1290 aaPredicted RBP9.04□□□□□ -0.96
DMD-227ENST00000493412 LILRB3O75022 631 aa9.04□□□□□ -0.96
DMD-227ENST00000493412 CSPP1Q1MSJ5 1256 aa9.04□□□□□ -0.96
DMD-227ENST00000493412 TLL2Q9Y6L7 1015 aa9.03□□□□□ -0.96
DMD-227ENST00000493412 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
DMD-227ENST00000493412 SNRPBP14678 240 aaKnown RBP9.01□□□□□ -0.97
DMD-227ENST00000493412 CTHP32929 405 aa9.01□□□□□ -0.97
DMD-227ENST00000493412 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
DMD-227ENST00000493412 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
DMD-227ENST00000493412 RTL5Q5HYW3 569 aaPredicted RBP9□□□□□ -0.97
DMD-227ENST00000493412 ERICH6Q7L0X2 663 aa9□□□□□ -0.97
DMD-227ENST00000493412 MPNDQ8N594 471 aa9□□□□□ -0.97
DMD-227ENST00000493412 TRIM47Q96LD4 638 aa9□□□□□ -0.97
DMD-227ENST00000493412 TREML4Q6UXN2 200 aa8.99□□□□□ -0.97
DMD-227ENST00000493412 FOXJ1Q92949 421 aa8.98□□□□□ -0.97
DMD-227ENST00000493412 WASF2Q9Y6W5 498 aa8.98□□□□□ -0.97
DMD-227ENST00000493412 NUTM2BA6NNL0 878 aaPredicted RBP8.97□□□□□ -0.97
DMD-227ENST00000493412 NUTM2EB1AL46 878 aaPredicted RBP8.97□□□□□ -0.97
DMD-227ENST00000493412 C4orf48Q5BLP8 95 aa8.97□□□□□ -0.97
DMD-227ENST00000493412 NUTM2DQ5VT03 806 aaPredicted RBP8.97□□□□□ -0.97
DMD-227ENST00000493412 TRIM46Q7Z4K8 759 aa8.97□□□□□ -0.97
DMD-227ENST00000493412 NUTM2AQ8IVF1 878 aaPredicted RBP8.97□□□□□ -0.97
DMD-227ENST00000493412 BMP1P13497 986 aa8.96□□□□□ -0.98
DMD-227ENST00000493412 GPBP1L1Q9HC44 474 aaPredicted RBP8.96□□□□□ -0.98
DMD-227ENST00000493412 SENP2Q9HC62 589 aa8.96□□□□□ -0.98
DMD-227ENST00000493412 POLR3EQ9NVU0 708 aa8.96□□□□□ -0.98
DMD-227ENST00000493412 NFX1Q12986 1120 aaKnown RBP8.95□□□□□ -0.98
DMD-227ENST00000493412 FBXO31Q5XUX0 539 aaPredicted RBP8.95□□□□□ -0.98
DMD-227ENST00000493412 TSC1Q92574 1164 aa8.95□□□□□ -0.98
DMD-227ENST00000493412 RSPH6AQ9H0K4 717 aa8.95□□□□□ -0.98
DMD-227ENST00000493412 CAPN5O15484 640 aaPredicted RBP8.94□□□□□ -0.98
DMD-227ENST00000493412 NNTQ13423 1086 aa8.94□□□□□ -0.98
DMD-227ENST00000493412 LCE2CQ5TA81 110 aa8.94□□□□□ -0.98
DMD-227ENST00000493412 KIFC2Q96AC6 838 aa8.94□□□□□ -0.98
DMD-227ENST00000493412 KDM4CQ9H3R0 1056 aa8.94□□□□□ -0.98
DMD-227ENST00000493412 HELBQ8NG08 1087 aaPredicted RBP8.93□□□□□ -0.98
DMD-227ENST00000493412 FAM174AQ8TBP5 190 aa8.93□□□□□ -0.98
DMD-227ENST00000493412 CDK15Q96Q40 435 aa8.93□□□□□ -0.98
DMD-227ENST00000493412 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
DMD-227ENST00000493412 PLEKHG3A1L390 1219 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 ADH1CP00326 375 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 TIMP2P16035 220 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 SH3D19Q5HYK7 790 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 SH3RF1Q7Z6J0 888 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 C14orf37Q86TY3 774 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 C1QTNF2Q9BXJ5 285 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
DMD-227ENST00000493412 WFS1O76024 890 aa8.91□□□□□ -0.98
DMD-227ENST00000493412 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
DMD-227ENST00000493412 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.9□□□□□ -0.98
DMD-227ENST00000493412 NR3C2P08235 984 aa8.89□□□□□ -0.99
DMD-227ENST00000493412 CTDSPL2Q05D32 466 aa8.89□□□□□ -0.99
DMD-227ENST00000493412 SH3BP5LQ7L8J4 393 aa8.89□□□□□ -0.99
DMD-227ENST00000493412 BPHLQ86WA6 291 aaPredicted RBP8.89□□□□□ -0.99
DMD-227ENST00000493412 GRM5P41594 1212 aa8.88□□□□□ -0.99
DMD-227ENST00000493412 NBPF14Q5TI25 921 aa8.88□□□□□ -0.99
DMD-227ENST00000493412 PPP2R2DQ66LE6 453 aa8.88□□□□□ -0.99
DMD-227ENST00000493412 PROCA1Q8NCQ7 364 aaPredicted RBP8.88□□□□□ -0.99
DMD-227ENST00000493412 ARMC2Q8NEN0 867 aa8.88□□□□□ -0.99
DMD-227ENST00000493412 DDRGK1Q96HY6 314 aa8.88□□□□□ -0.99
DMD-227ENST00000493412 TERTO14746 1132 aaKnown RBP8.87□□□□□ -0.99
DMD-227ENST00000493412 WDR4P57081 412 aaKnown RBP8.87□□□□□ -0.99
DMD-227ENST00000493412 AGERQ15109 404 aa8.86□□□□□ -0.99
DMD-227ENST00000493412 TRMT44Q8IYL2 757 aaKnown RBP8.86□□□□□ -0.99
DMD-227ENST00000493412 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
DMD-227ENST00000493412 LRRN4Q8WUT4 740 aa8.86□□□□□ -0.99
DMD-227ENST00000493412 ZFP42Q96MM3 310 aa8.86□□□□□ -0.99
DMD-227ENST00000493412 NR5A1Q13285 461 aa8.85□□□□□ -0.99
DMD-227ENST00000493412 ARID5BQ14865 1188 aa8.85□□□□□ -0.99
DMD-227ENST00000493412 ITPKCQ96DU7 683 aa8.85□□□□□ -0.99
DMD-227ENST00000493412 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
DMD-227ENST00000493412 MAP4K5Q9Y4K4 846 aa8.85□□□□□ -0.99
DMD-227ENST00000493412 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
DMD-227ENST00000493412 GPKOWQ92917 476 aaPredicted RBP eCLIP8.84□□□□□ -0.99
DMD-227ENST00000493412 WIPF1O43516 503 aa8.83□□□□□ -1
DMD-227ENST00000493412 ZIC2O95409 532 aaPredicted RBP8.83□□□□□ -1
DMD-227ENST00000493412 ERFEQ4G0M1 354 aa8.83□□□□□ -1
DMD-227ENST00000493412 MAGEB6P1A0A0J9YX57 407 aa8.82□□□□□ -1
DMD-227ENST00000493412 FSHRP23945 695 aa8.82□□□□□ -1
DMD-227ENST00000493412 NR6A1Q15406 480 aa8.81□□□□□ -1
DMD-227ENST00000493412 PURBQ96QR8 312 aaKnown RBP8.81□□□□□ -1
DMD-227ENST00000493412 OCSTAMPQ9BR26 566 aa8.81□□□□□ -1
DMD-227ENST00000493412 CARD14Q9BXL6 1004 aa8.81□□□□□ -1
DMD-227ENST00000493412 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
DMD-227ENST00000493412 FKBPLQ9UIM3 349 aa8.81□□□□□ -1
DMD-227ENST00000493412 MEIOBQ8N635 442 aa8.8□□□□□ -1
DMD-227ENST00000493412 SCARF1Q14162 830 aa8.79□□□□□ -1
DMD-227ENST00000493412 PDXDC2PQ6P474 469 aa8.79□□□□□ -1
DMD-227ENST00000493412 VASH1Q7L8A9 365 aaPredicted RBP8.79□□□□□ -1
DMD-227ENST00000493412 ZC3H4Q9UPT8 1303 aaKnown RBP8.79□□□□□ -1
DMD-227ENST00000493412 EPS8L1Q8TE68 723 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms