RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
TM4SF1-204ENST00000493348 TERF2IPQ9NYB0 399 aa11.3□□□□□ -0.6
TM4SF1-204ENST00000493348 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
TM4SF1-204ENST00000493348 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
TM4SF1-204ENST00000493348 TESK2Q96S53 571 aa11.29□□□□□ -0.6
TM4SF1-204ENST00000493348 PXDNQ92626 1479 aa11.29□□□□□ -0.6
TM4SF1-204ENST00000493348 SBNO1A3KN83 1393 aa11.28□□□□□ -0.6
TM4SF1-204ENST00000493348 NINLQ9Y2I6 1382 aa11.28□□□□□ -0.6
TM4SF1-204ENST00000493348 SPATA31A3Q5VYP0 1347 aa11.28□□□□□ -0.6
TM4SF1-204ENST00000493348 POLR3AO14802 1390 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-204ENST00000493348 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
TM4SF1-204ENST00000493348 AKAP12Q02952 1782 aa11.27□□□□□ -0.61
TM4SF1-204ENST00000493348 C1QBPQ07021 282 aaKnown RBP11.27□□□□□ -0.61
TM4SF1-204ENST00000493348 KTN1Q86UP2 1357 aaKnown RBP11.27□□□□□ -0.61
TM4SF1-204ENST00000493348 PNPLA6Q8IY17 1366 aa11.27□□□□□ -0.61
TM4SF1-204ENST00000493348 ABTB2Q8N961 1025 aa11.26□□□□□ -0.61
TM4SF1-204ENST00000493348 DISP3Q9P2K9 1392 aa11.26□□□□□ -0.61
TM4SF1-204ENST00000493348 MED1Q15648 1581 aaPredicted RBP11.25□□□□□ -0.61
TM4SF1-204ENST00000493348 TRPM3Q9HCF6 1732 aaPredicted RBP11.25□□□□□ -0.61
TM4SF1-204ENST00000493348 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
TM4SF1-204ENST00000493348 ADAMTS2O95450 1211 aa11.24□□□□□ -0.61
TM4SF1-204ENST00000493348 NLRP13Q86W25 1043 aa11.24□□□□□ -0.61
TM4SF1-204ENST00000493348 SLC12A5Q9H2X9 1139 aa11.24□□□□□ -0.61
TM4SF1-204ENST00000493348 USP6P35125 1406 aa11.24□□□□□ -0.61
TM4SF1-204ENST00000493348 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
TM4SF1-204ENST00000493348 NUTM2GQ5VZR2 741 aa11.23□□□□□ -0.61
TM4SF1-204ENST00000493348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.23□□□□□ -0.61
TM4SF1-204ENST00000493348 NGLY1Q96IV0 654 aa11.23□□□□□ -0.61
TM4SF1-204ENST00000493348 C8orf37Q96NL8 207 aa11.23□□□□□ -0.61
TM4SF1-204ENST00000493348 TTC21AQ8NDW8 1320 aa11.23□□□□□ -0.61
TM4SF1-204ENST00000493348 MON2Q7Z3U7 1717 aa11.23□□□□□ -0.61
TM4SF1-204ENST00000493348 NLRP6P59044 892 aa11.22□□□□□ -0.61
TM4SF1-204ENST00000493348 MARF1Q9Y4F3 1742 aaKnown RBP11.22□□□□□ -0.61
TM4SF1-204ENST00000493348 ANKRD36BQ8N2N9 1353 aa11.21□□□□□ -0.61
TM4SF1-204ENST00000493348 TTC21BQ7Z4L5 1316 aa11.21□□□□□ -0.61
TM4SF1-204ENST00000493348 CPSF1Q10570 1443 aaKnown RBP11.2□□□□□ -0.62
TM4SF1-204ENST00000493348 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
TM4SF1-204ENST00000493348 A0A1W2PP64 1363 aa11.2□□□□□ -0.62
TM4SF1-204ENST00000493348 ZBTB7CA1YPR0 619 aa11.2□□□□□ -0.62
TM4SF1-204ENST00000493348 ZNF772Q68DY9 489 aaPredicted RBP11.2□□□□□ -0.62
TM4SF1-204ENST00000493348 CABLES1Q8TDN4 633 aa11.2□□□□□ -0.62
TM4SF1-204ENST00000493348 ABCA3Q99758 1704 aa11.19□□□□□ -0.62
TM4SF1-204ENST00000493348 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
TM4SF1-204ENST00000493348 MYOM1P52179 1685 aa11.18□□□□□ -0.62
TM4SF1-204ENST00000493348 LRP6O75581 1613 aa11.18□□□□□ -0.62
TM4SF1-204ENST00000493348 COG3Q96JB2 828 aa11.18□□□□□ -0.62
TM4SF1-204ENST00000493348 PRDM11Q9NQV5 511 aa11.18□□□□□ -0.62
TM4SF1-204ENST00000493348 PHRF1Q9P1Y6 1649 aaKnown RBP11.17□□□□□ -0.62
TM4SF1-204ENST00000493348 AFF2P51816 1311 aa11.17□□□□□ -0.62
TM4SF1-204ENST00000493348 NRKQ7Z2Y5 1582 aa11.17□□□□□ -0.62
TM4SF1-204ENST00000493348 KIF20BQ96Q89 1820 aa11.17□□□□□ -0.62
TM4SF1-204ENST00000493348 SOX12O15370 315 aa11.17□□□□□ -0.62
TM4SF1-204ENST00000493348 PIK3C2AO00443 1686 aa11.17□□□□□ -0.62
TM4SF1-204ENST00000493348 ZC3H6P61129 1189 aaKnown RBP11.16□□□□□ -0.62
TM4SF1-204ENST00000493348 USP21Q9UK80 565 aa11.16□□□□□ -0.62
TM4SF1-204ENST00000493348 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
TM4SF1-204ENST00000493348 CD163L1Q9NR16 1453 aa11.16□□□□□ -0.62
TM4SF1-204ENST00000493348 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 GCP02774 474 aa11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 NME9Q86XW9 330 aa11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 CCDC9Q9Y3X0 531 aaKnown RBP11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 NSD3Q9BZ95 1437 aa11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 COL14A1Q05707 1796 aaKnown RBP11.15□□□□□ -0.62
TM4SF1-204ENST00000493348 EVA1CP58658 441 aa11.14□□□□□ -0.63
TM4SF1-204ENST00000493348 PANK3Q9H999 370 aa11.14□□□□□ -0.63
TM4SF1-204ENST00000493348 SSH2Q76I76 1423 aa11.14□□□□□ -0.63
TM4SF1-204ENST00000493348 CRYBG1Q9Y4K1 1723 aa11.14□□□□□ -0.63
TM4SF1-204ENST00000493348 PLCH1Q4KWH8 1693 aa11.14□□□□□ -0.63
TM4SF1-204ENST00000493348 USP19O94966 1318 aa11.13□□□□□ -0.63
TM4SF1-204ENST00000493348 NWD2Q9ULI1 1742 aa11.13□□□□□ -0.63
TM4SF1-204ENST00000493348 QTRT2Q9H974 415 aaKnown RBP11.13□□□□□ -0.63
TM4SF1-204ENST00000493348 TRPC5Q9UL62 973 aaPredicted RBP11.13□□□□□ -0.63
TM4SF1-204ENST00000493348 KIAA0232Q92628 1395 aa11.13□□□□□ -0.63
TM4SF1-204ENST00000493348 CCDC7Q96M83 1385 aa11.13□□□□□ -0.63
TM4SF1-204ENST00000493348 C11orf95C9JLR9 678 aaPredicted RBP11.12□□□□□ -0.63
TM4SF1-204ENST00000493348 UNC5CLQ8IV45 518 aa11.12□□□□□ -0.63
TM4SF1-204ENST00000493348 GGNBP2Q9H3C7 697 aa11.12□□□□□ -0.63
TM4SF1-204ENST00000493348 BTG4Q9NY30 223 aa11.12□□□□□ -0.63
TM4SF1-204ENST00000493348 USP31Q70CQ4 1352 aa11.12□□□□□ -0.63
TM4SF1-204ENST00000493348 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 LTN1O94822 1766 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 SLIT3O75094 1523 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 RXRBP28702 533 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 CHRNA2Q15822 529 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 FNBP4Q8N3X1 1017 aaPredicted RBP11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 STRN4Q9NRL3 753 aa11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.11□□□□□ -0.63
TM4SF1-204ENST00000493348 A0A0G2JS52 829 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 FYB1O15117 783 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 CSB-PGBD3P0DP91 1061 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 AMPHP49418 695 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 MYT1Q01538 1121 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 ZRANB1Q9UGI0 708 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 CPDO75976 1380 aa11.1□□□□□ -0.63
TM4SF1-204ENST00000493348 WASHC2AQ641Q2 1341 aa11.09□□□□□ -0.63
TM4SF1-204ENST00000493348 NSD2O96028 1365 aa11.09□□□□□ -0.63
TM4SF1-204ENST00000493348 RBM6P78332 1123 aaKnown RBP11.09□□□□□ -0.63
TM4SF1-204ENST00000493348 ANKRD26Q9UPS8 1709 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms