RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 ACEP12821 1306 aa19.31■□□□□ 0.68
IRF1-210ENST00000493208 SLC24A1O60721 1099 aa19.31■□□□□ 0.68
IRF1-210ENST00000493208 VPS72Q15906 364 aa19.31■□□□□ 0.68
IRF1-210ENST00000493208 NBPF8Q3BBV2 869 aa19.3■□□□□ 0.68
IRF1-210ENST00000493208 CCDC125Q86Z20 511 aa19.3■□□□□ 0.68
IRF1-210ENST00000493208 PPIP5K1Q6PFW1 1433 aa19.3■□□□□ 0.68
IRF1-210ENST00000493208 PRDM11Q9NQV5 511 aa19.29■□□□□ 0.68
IRF1-210ENST00000493208 ABTB2Q8N961 1025 aa19.28■□□□□ 0.68
IRF1-210ENST00000493208 CARD11Q9BXL7 1154 aa19.28■□□□□ 0.68
IRF1-210ENST00000493208 TRPM1Q7Z4N2 1603 aa19.28■□□□□ 0.68
IRF1-210ENST00000493208 TRPM3Q9HCF6 1732 aaPredicted RBP19.28■□□□□ 0.68
IRF1-210ENST00000493208 NWD2Q9ULI1 1742 aa19.28■□□□□ 0.68
IRF1-210ENST00000493208 NLRP13Q86W25 1043 aa19.27■□□□□ 0.68
IRF1-210ENST00000493208 CABP2Q9NPB3 220 aa19.27■□□□□ 0.68
IRF1-210ENST00000493208 QRICH2Q9H0J4 1663 aa19.27■□□□□ 0.67
IRF1-210ENST00000493208 A0A0G2JS52 829 aa19.26■□□□□ 0.67
IRF1-210ENST00000493208 MYT1Q01538 1121 aa19.26■□□□□ 0.67
IRF1-210ENST00000493208 ZNF692Q9BU19 519 aaPredicted RBP19.26■□□□□ 0.67
IRF1-210ENST00000493208 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
IRF1-210ENST00000493208 RALGAPBQ86X10 1494 aa19.26■□□□□ 0.67
IRF1-210ENST00000493208 ALS2Q96Q42 1657 aa19.26■□□□□ 0.67
IRF1-210ENST00000493208 FAM83GA6ND36 823 aa19.25■□□□□ 0.67
IRF1-210ENST00000493208 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
IRF1-210ENST00000493208 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
IRF1-210ENST00000493208 COL14A1Q05707 1796 aaKnown RBP19.24■□□□□ 0.67
IRF1-210ENST00000493208 ABCA3Q99758 1704 aa19.23■□□□□ 0.67
IRF1-210ENST00000493208 CABP1Q9NZU7 370 aa19.22■□□□□ 0.67
IRF1-210ENST00000493208 SBNO2Q9Y2G9 1366 aa19.21■□□□□ 0.67
IRF1-210ENST00000493208 PLCH1Q4KWH8 1693 aa19.21■□□□□ 0.67
IRF1-210ENST00000493208 EVA1CP58658 441 aa19.21■□□□□ 0.67
IRF1-210ENST00000493208 SEPT12Q8IYM1 358 aa19.2■□□□□ 0.66
IRF1-210ENST00000493208 KIAA0232Q92628 1395 aa19.19■□□□□ 0.66
IRF1-210ENST00000493208 ONECUT3O60422 494 aaPredicted RBP19.18■□□□□ 0.66
IRF1-210ENST00000493208 NUTM2GQ5VZR2 741 aa19.18■□□□□ 0.66
IRF1-210ENST00000493208 USP6P35125 1406 aa19.17■□□□□ 0.66
IRF1-210ENST00000493208 NLRP6P59044 892 aa19.17■□□□□ 0.66
IRF1-210ENST00000493208 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
IRF1-210ENST00000493208 KRT27Q7Z3Y8 459 aa19.17■□□□□ 0.66
IRF1-210ENST00000493208 GLI3P10071 1580 aa19.16■□□□□ 0.66
IRF1-210ENST00000493208 KCNH5Q8NCM2 988 aa19.16■□□□□ 0.66
IRF1-210ENST00000493208 TIMELESSQ9UNS1 1208 aa19.16■□□□□ 0.66
IRF1-210ENST00000493208 TTC21AQ8NDW8 1320 aa19.16■□□□□ 0.66
IRF1-210ENST00000493208 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
IRF1-210ENST00000493208 CPDO75976 1380 aa19.16■□□□□ 0.66
IRF1-210ENST00000493208 HDGFL2Q7Z4V5 671 aaPredicted RBP19.15■□□□□ 0.66
IRF1-210ENST00000493208 USP19O94966 1318 aa19.15■□□□□ 0.66
IRF1-210ENST00000493208 GCP02774 474 aa19.14■□□□□ 0.65
IRF1-210ENST00000493208 FAM98CQ17RN3 349 aaKnown RBP19.14■□□□□ 0.65
IRF1-210ENST00000493208 PUS7Q96PZ0 661 aaKnown RBP19.14■□□□□ 0.65
IRF1-210ENST00000493208 STRN4Q9NRL3 753 aa19.14■□□□□ 0.65
IRF1-210ENST00000493208 SPATA31A5Q5VU36 1347 aa19.14■□□□□ 0.65
IRF1-210ENST00000493208 SPATA31A7Q8IWB4 1347 aa19.14■□□□□ 0.65
IRF1-210ENST00000493208 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
IRF1-210ENST00000493208 PHRF1Q9P1Y6 1649 aaKnown RBP19.12■□□□□ 0.65
IRF1-210ENST00000493208 KTN1Q86UP2 1357 aaKnown RBP19.12■□□□□ 0.65
IRF1-210ENST00000493208 TERF2IPQ9NYB0 399 aa19.12■□□□□ 0.65
IRF1-210ENST00000493208 NINLQ9Y2I6 1382 aa19.11■□□□□ 0.65
IRF1-210ENST00000493208 CHRNA2Q15822 529 aa19.11■□□□□ 0.65
IRF1-210ENST00000493208 TMC1Q8TDI8 760 aa19.11■□□□□ 0.65
IRF1-210ENST00000493208 NRAPQ86VF7 1730 aa19.11■□□□□ 0.65
IRF1-210ENST00000493208 CRYBG1Q9Y4K1 1723 aa19.11■□□□□ 0.65
IRF1-210ENST00000493208 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
IRF1-210ENST00000493208 THRAP3Q9Y2W1 955 aaKnown RBP19.1■□□□□ 0.65
IRF1-210ENST00000493208 SPATA31A1Q5TZJ5 1347 aa19.09■□□□□ 0.65
IRF1-210ENST00000493208 C11orf95C9JLR9 678 aaPredicted RBP19.09■□□□□ 0.65
IRF1-210ENST00000493208 CDCA8Q53HL2 280 aa19.09■□□□□ 0.65
IRF1-210ENST00000493208 NRKQ7Z2Y5 1582 aa19.09■□□□□ 0.65
IRF1-210ENST00000493208 TTC21BQ7Z4L5 1316 aa19.08■□□□□ 0.65
IRF1-210ENST00000493208 ZBTB7CA1YPR0 619 aa19.08■□□□□ 0.64
IRF1-210ENST00000493208 BAG6P46379 1132 aa19.07■□□□□ 0.64
IRF1-210ENST00000493208 BARGINQ6ZT62 677 aa19.07■□□□□ 0.64
IRF1-210ENST00000493208 TCP11L2Q8N4U5 519 aa19.07■□□□□ 0.64
IRF1-210ENST00000493208 SSH2Q76I76 1423 aa19.07■□□□□ 0.64
IRF1-210ENST00000493208 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
IRF1-210ENST00000493208 CPSF1Q10570 1443 aaKnown RBP19.06■□□□□ 0.64
IRF1-210ENST00000493208 AATKQ6ZMQ8 1374 aa19.06■□□□□ 0.64
IRF1-210ENST00000493208 TMF1P82094 1093 aa19.05■□□□□ 0.64
IRF1-210ENST00000493208 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
IRF1-210ENST00000493208 USP35Q9P2H5 1018 aa19.05■□□□□ 0.64
IRF1-210ENST00000493208 FAM196AQ6ZSG2 479 aa19.04■□□□□ 0.64
IRF1-210ENST00000493208 SLIT3O75094 1523 aa19.04■□□□□ 0.64
IRF1-210ENST00000493208 CDCA7Q9BWT1 371 aaPredicted RBP19.03■□□□□ 0.64
IRF1-210ENST00000493208 ST20-MTHFSA0A0A6YYL1 179 aa19.02■□□□□ 0.64
IRF1-210ENST00000493208 TOM1L2Q6ZVM7 507 aa19.02■□□□□ 0.64
IRF1-210ENST00000493208 CRB1P82279 1406 aa19.01■□□□□ 0.63
IRF1-210ENST00000493208 EDC4Q6P2E9 1401 aaKnown RBP19.01■□□□□ 0.63
IRF1-210ENST00000493208 CSB-PGBD3P0DP91 1061 aa19.01■□□□□ 0.63
IRF1-210ENST00000493208 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
IRF1-210ENST00000493208 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19■□□□□ 0.63
IRF1-210ENST00000493208 COL5A2P05997 1499 aaPredicted RBP19■□□□□ 0.63
IRF1-210ENST00000493208 AKAP12Q02952 1782 aa19■□□□□ 0.63
IRF1-210ENST00000493208 CAMTA1Q9Y6Y1 1673 aa18.99■□□□□ 0.63
IRF1-210ENST00000493208 USP47Q96K76 1375 aa18.99■□□□□ 0.63
IRF1-210ENST00000493208 PIK3C2AO00443 1686 aa18.98■□□□□ 0.63
IRF1-210ENST00000493208 USP31Q70CQ4 1352 aa18.98■□□□□ 0.63
IRF1-210ENST00000493208 SOX12O15370 315 aa18.98■□□□□ 0.63
IRF1-210ENST00000493208 ARHGEF25Q86VW2 580 aa18.98■□□□□ 0.63
IRF1-210ENST00000493208 ABCC6O95255 1503 aa18.98■□□□□ 0.63
IRF1-210ENST00000493208 LMO7Q8WWI1 1683 aa18.98■□□□□ 0.63
IRF1-210ENST00000493208 THSD7AQ9UPZ6 1657 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms