RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 NUDCQ9Y266 331 aa7.17□□□□□ -1.26
NEK4-205ENST00000493199 C11orf95C9JLR9 678 aaPredicted RBP7.16□□□□□ -1.26
NEK4-205ENST00000493199 NLRP6P59044 892 aa7.16□□□□□ -1.26
NEK4-205ENST00000493199 POTEAQ6S8J7 498 aa7.16□□□□□ -1.26
NEK4-205ENST00000493199 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.16□□□□□ -1.26
NEK4-205ENST00000493199 POLR3AO14802 1390 aaPredicted RBP7.16□□□□□ -1.26
NEK4-205ENST00000493199 ARHGEF10O15013 1369 aa7.16□□□□□ -1.26
NEK4-205ENST00000493199 C1orf167Q5SNV9 1468 aa7.16□□□□□ -1.26
NEK4-205ENST00000493199 KIF1AQ12756 1690 aa7.16□□□□□ -1.26
NEK4-205ENST00000493199 ROBO1Q9Y6N7 1651 aa7.16□□□□□ -1.26
NEK4-205ENST00000493199 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.15□□□□□ -1.26
NEK4-205ENST00000493199 ORAI2Q96SN7 254 aa7.15□□□□□ -1.26
NEK4-205ENST00000493199 FMN2Q9NZ56 1722 aa7.15□□□□□ -1.27
NEK4-205ENST00000493199 A0A1W2PP64 1363 aa7.14□□□□□ -1.27
NEK4-205ENST00000493199 CCER2I3L3R5 266 aa7.14□□□□□ -1.27
NEK4-205ENST00000493199 CC2D1BQ5T0F9 858 aaKnown RBP7.14□□□□□ -1.27
NEK4-205ENST00000493199 TTC21BQ7Z4L5 1316 aa7.14□□□□□ -1.27
NEK4-205ENST00000493199 MYBBP1AQ9BQG0 1328 aaKnown RBP7.14□□□□□ -1.27
NEK4-205ENST00000493199 NSD3Q9BZ95 1437 aa7.14□□□□□ -1.27
NEK4-205ENST00000493199 NALCNQ8IZF0 1738 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 USP6P35125 1406 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 MST1RQ04912 1400 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 CPSF1Q10570 1443 aaKnown RBP7.13□□□□□ -1.27
NEK4-205ENST00000493199 SBNO1A3KN83 1393 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 JCADQ9P266 1359 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 PRR36Q9H6K5 1346 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 PER1O15534 1290 aaPredicted RBP7.13□□□□□ -1.27
NEK4-205ENST00000493199 MAPK8IP2Q13387 824 aaPredicted RBP7.13□□□□□ -1.27
NEK4-205ENST00000493199 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
NEK4-205ENST00000493199 BRINP3Q76B58 766 aa7.13□□□□□ -1.27
NEK4-205ENST00000493199 PRKRIP1Q9H875 184 aaPredicted RBP7.13□□□□□ -1.27
NEK4-205ENST00000493199 FYB1O15117 783 aa7.12□□□□□ -1.27
NEK4-205ENST00000493199 AMPHP49418 695 aa7.12□□□□□ -1.27
NEK4-205ENST00000493199 CNGB1Q14028 1251 aaPredicted RBP7.12□□□□□ -1.27
NEK4-205ENST00000493199 PHLPP1O60346 1717 aa7.12□□□□□ -1.27
NEK4-205ENST00000493199 KIF24Q5T7B8 1368 aa7.11□□□□□ -1.27
NEK4-205ENST00000493199 GGNBP2Q9H3C7 697 aa7.11□□□□□ -1.27
NEK4-205ENST00000493199 SOS2Q07890 1332 aaPredicted RBP7.1□□□□□ -1.27
NEK4-205ENST00000493199 SPATA31A6Q5VVP1 1343 aa7.1□□□□□ -1.27
NEK4-205ENST00000493199 COL16A1Q07092 1604 aaPredicted RBP7.1□□□□□ -1.27
NEK4-205ENST00000493199 PPM1GO15355 546 aaPredicted RBP7.1□□□□□ -1.27
NEK4-205ENST00000493199 AMER1Q5JTC6 1135 aaPredicted RBP7.1□□□□□ -1.27
NEK4-205ENST00000493199 CARD14Q9BXL6 1004 aa7.1□□□□□ -1.27
NEK4-205ENST00000493199 MRS2Q9HD23 443 aa7.1□□□□□ -1.27
NEK4-205ENST00000493199 SMG6Q86US8 1419 aaKnown RBP7.1□□□□□ -1.27
NEK4-205ENST00000493199 AATKQ6ZMQ8 1374 aa7.09□□□□□ -1.27
NEK4-205ENST00000493199 USP31Q70CQ4 1352 aa7.09□□□□□ -1.27
NEK4-205ENST00000493199 SPATA31A3Q5VYP0 1347 aa7.09□□□□□ -1.27
NEK4-205ENST00000493199 GCP02774 474 aa7.09□□□□□ -1.27
NEK4-205ENST00000493199 ZNF772Q68DY9 489 aaPredicted RBP7.09□□□□□ -1.27
NEK4-205ENST00000493199 TNS3Q68CZ2 1445 aa7.09□□□□□ -1.28
NEK4-205ENST00000493199 USP32Q8NFA0 1604 aa7.09□□□□□ -1.28
NEK4-205ENST00000493199 DIAPH1O60610 1272 aaKnown RBP7.08□□□□□ -1.28
NEK4-205ENST00000493199 TNNT2P45379 298 aaPredicted RBP7.08□□□□□ -1.28
NEK4-205ENST00000493199 EVA1CP58658 441 aa7.08□□□□□ -1.28
NEK4-205ENST00000493199 NME9Q86XW9 330 aa7.08□□□□□ -1.28
NEK4-205ENST00000493199 NGEFQ8N5V2 710 aa7.08□□□□□ -1.28
NEK4-205ENST00000493199 SHPRHQ149N8 1683 aa7.08□□□□□ -1.28
NEK4-205ENST00000493199 TOPAZ1Q8N9V7 1692 aa7.08□□□□□ -1.28
NEK4-205ENST00000493199 AHDC1Q5TGY3 1603 aaPredicted RBP7.08□□□□□ -1.28
NEK4-205ENST00000493199 PARD3Q8TEW0 1356 aa7.08□□□□□ -1.28
NEK4-205ENST00000493199 ZBTB7CA1YPR0 619 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 PPP2R1AP30153 589 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 MTHFSP49914 203 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 XPCQ01831 940 aaPredicted RBP7.07□□□□□ -1.28
NEK4-205ENST00000493199 MEX3CQ5U5Q3 659 aaKnown RBP7.07□□□□□ -1.28
NEK4-205ENST00000493199 UPF1Q92900 1129 aaKnown RBP eCLIP7.07□□□□□ -1.28
NEK4-205ENST00000493199 PRDM11Q9NQV5 511 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 LRP6O75581 1613 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 RGPD8O14715 1765 aaPredicted RBP7.07□□□□□ -1.28
NEK4-205ENST00000493199 AKAP12Q02952 1782 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 MON2Q7Z3U7 1717 aa7.07□□□□□ -1.28
NEK4-205ENST00000493199 MYOM1P52179 1685 aa7.06□□□□□ -1.28
NEK4-205ENST00000493199 CDK12Q9NYV4 1490 aaPredicted RBP7.06□□□□□ -1.28
NEK4-205ENST00000493199 SOX12O15370 315 aa7.06□□□□□ -1.28
NEK4-205ENST00000493199 CSB-PGBD3P0DP91 1061 aa7.06□□□□□ -1.28
NEK4-205ENST00000493199 NUTM2GQ5VZR2 741 aa7.06□□□□□ -1.28
NEK4-205ENST00000493199 RTL1A6NKG5 1358 aa7.06□□□□□ -1.28
NEK4-205ENST00000493199 FLT4P35916 1363 aa7.06□□□□□ -1.28
NEK4-205ENST00000493199 CD163L1Q9NR16 1453 aa7.05□□□□□ -1.28
NEK4-205ENST00000493199 MAPK8IP3Q9UPT6 1336 aa7.05□□□□□ -1.28
NEK4-205ENST00000493199 SSH2Q76I76 1423 aa7.05□□□□□ -1.28
NEK4-205ENST00000493199 U2SURPO15042 1029 aaKnown RBP7.05□□□□□ -1.28
NEK4-205ENST00000493199 MIER1Q8N108 512 aa7.05□□□□□ -1.28
NEK4-205ENST00000493199 IP6K1Q92551 441 aa7.05□□□□□ -1.28
NEK4-205ENST00000493199 KIF20BQ96Q89 1820 aa7.05□□□□□ -1.28
NEK4-205ENST00000493199 PLEKHG5O94827 1062 aa7.04□□□□□ -1.28
NEK4-205ENST00000493199 FCHSD2O94868 740 aa7.04□□□□□ -1.28
NEK4-205ENST00000493199 U2AF1L5P0DN76 240 aaPredicted RBP7.04□□□□□ -1.28
NEK4-205ENST00000493199 RXRBP28702 533 aa7.04□□□□□ -1.28
NEK4-205ENST00000493199 U2AF1Q01081 240 aaKnown RBP eCLIP7.04□□□□□ -1.28
NEK4-205ENST00000493199 FAM9BQ8IZU0 186 aa7.04□□□□□ -1.28
NEK4-205ENST00000493199 POLKQ9UBT6 870 aa7.04□□□□□ -1.28
NEK4-205ENST00000493199 USP19O94966 1318 aa7.03□□□□□ -1.28
NEK4-205ENST00000493199 OVOS2A0A0J9YW53 1432 aa7.03□□□□□ -1.28
NEK4-205ENST00000493199 BLMP54132 1417 aaPredicted RBP7.03□□□□□ -1.28
NEK4-205ENST00000493199 OVOS2Q6IE36 1432 aa7.03□□□□□ -1.28
NEK4-205ENST00000493199 ZC3H6P61129 1189 aaKnown RBP7.03□□□□□ -1.28
NEK4-205ENST00000493199 CACNB1Q02641 598 aaPredicted RBP7.03□□□□□ -1.28
NEK4-205ENST00000493199 CALD1Q05682 793 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms