RNA–Protein interactions for RNA: ENST00000493156.6

RFC2-210, Transcript of replication factor C subunit 2, humanhuman

TSL 5

Gene RFC2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-210ENST00000493156 SIN3AQ96ST3 1273 aa28.35■■■□□ 2.13
RFC2-210ENST00000493156 CENPJQ9HC77 1338 aaPredicted RBP28.35■■■□□ 2.13
RFC2-210ENST00000493156 PLEKHG5O94827 1062 aa28.34■■■□□ 2.13
RFC2-210ENST00000493156 CCDC61Q9Y6R9 512 aa28.34■■■□□ 2.13
RFC2-210ENST00000493156 FAM83GA6ND36 823 aa28.33■■■□□ 2.13
RFC2-210ENST00000493156 PHRF1Q9P1Y6 1649 aaKnown RBP28.32■■■□□ 2.12
RFC2-210ENST00000493156 PLEKHG3A1L390 1219 aa28.32■■■□□ 2.12
RFC2-210ENST00000493156 BRWD3Q6RI45 1802 aa28.29■■■□□ 2.12
RFC2-210ENST00000493156 ACEP12821 1306 aa28.29■■■□□ 2.12
RFC2-210ENST00000493156 PAK3O75914 559 aaPredicted RBP28.29■■■□□ 2.12
RFC2-210ENST00000493156 ONECUT3O60422 494 aaPredicted RBP28.26■■■□□ 2.11
RFC2-210ENST00000493156 NBPF8Q3BBV2 869 aa28.26■■■□□ 2.11
RFC2-210ENST00000493156 PPIP5K1Q6PFW1 1433 aa28.26■■■□□ 2.11
RFC2-210ENST00000493156 EP400Q96L91 3159 aa28.25■■■□□ 2.11
RFC2-210ENST00000493156 NEUROD1Q13562 356 aa28.24■■■□□ 2.11
RFC2-210ENST00000493156 SRPK2P78362 688 aaKnown RBP28.23■■■□□ 2.11
RFC2-210ENST00000493156 BTG4Q9NY30 223 aa28.23■■■□□ 2.11
RFC2-210ENST00000493156 NRKQ7Z2Y5 1582 aa28.22■■■□□ 2.11
RFC2-210ENST00000493156 ROCK2O75116 1388 aaKnown RBP28.22■■■□□ 2.11
RFC2-210ENST00000493156 CCDC125Q86Z20 511 aa28.21■■■□□ 2.11
RFC2-210ENST00000493156 SEPT12Q8IYM1 358 aa28.21■■■□□ 2.11
RFC2-210ENST00000493156 CABP2Q9NPB3 220 aa28.2■■■□□ 2.1
RFC2-210ENST00000493156 CCDC9Q9Y3X0 531 aaKnown RBP28.2■■■□□ 2.1
RFC2-210ENST00000493156 PRDM11Q9NQV5 511 aa28.19■■■□□ 2.1
RFC2-210ENST00000493156 BRD4O60885 1362 aaPredicted RBP28.19■■■□□ 2.1
RFC2-210ENST00000493156 KIAA0232Q92628 1395 aa28.19■■■□□ 2.1
RFC2-210ENST00000493156 USP19O94966 1318 aa28.17■■■□□ 2.1
RFC2-210ENST00000493156 BLMP54132 1417 aaPredicted RBP28.16■■■□□ 2.1
RFC2-210ENST00000493156 THSD7AQ9UPZ6 1657 aa28.16■■■□□ 2.1
RFC2-210ENST00000493156 SPATA31A5Q5VU36 1347 aa28.15■■■□□ 2.1
RFC2-210ENST00000493156 EVC2Q86UK5 1308 aa28.15■■■□□ 2.1
RFC2-210ENST00000493156 SPATA31A7Q8IWB4 1347 aa28.15■■■□□ 2.1
RFC2-210ENST00000493156 NUTM2GQ5VZR2 741 aa28.14■■■□□ 2.1
RFC2-210ENST00000493156 USP6P35125 1406 aa28.14■■■□□ 2.1
RFC2-210ENST00000493156 ABTB2Q8N961 1025 aa28.13■■■□□ 2.09
RFC2-210ENST00000493156 LMO7Q8WWI1 1683 aa28.13■■■□□ 2.09
RFC2-210ENST00000493156 CPDO75976 1380 aa28.12■■■□□ 2.09
RFC2-210ENST00000493156 SSH2Q76I76 1423 aa28.11■■■□□ 2.09
RFC2-210ENST00000493156 FAM98CQ17RN3 349 aaKnown RBP28.11■■■□□ 2.09
RFC2-210ENST00000493156 KRT27Q7Z3Y8 459 aa28.11■■■□□ 2.09
RFC2-210ENST00000493156 CABP1Q9NZU7 370 aa28.11■■■□□ 2.09
RFC2-210ENST00000493156 SBNO2Q9Y2G9 1366 aa28.1■■■□□ 2.09
RFC2-210ENST00000493156 ZC3H6P61129 1189 aaKnown RBP28.09■■■□□ 2.09
RFC2-210ENST00000493156 CHRNA2Q15822 529 aa28.09■■■□□ 2.09
RFC2-210ENST00000493156 AKAP12Q02952 1782 aa28.09■■■□□ 2.09
RFC2-210ENST00000493156 SLIT3O75094 1523 aa28.08■■■□□ 2.08
RFC2-210ENST00000493156 PIK3C2AO00443 1686 aa28.07■■■□□ 2.08
RFC2-210ENST00000493156 NLRP13Q86W25 1043 aa28.07■■■□□ 2.08
RFC2-210ENST00000493156 CAMTA1Q9Y6Y1 1673 aa28.07■■■□□ 2.08
RFC2-210ENST00000493156 SPATA31A1Q5TZJ5 1347 aa28.06■■■□□ 2.08
RFC2-210ENST00000493156 TONSLQ96HA7 1378 aa28.06■■■□□ 2.08
RFC2-210ENST00000493156 A0A0G2JS52 829 aa28.04■■■□□ 2.08
RFC2-210ENST00000493156 MYT1Q01538 1121 aa28.04■■■□□ 2.08
RFC2-210ENST00000493156 TRIM26Q12899 539 aaPredicted RBP28.04■■■□□ 2.08
RFC2-210ENST00000493156 GCP02774 474 aa28.03■■■□□ 2.08
RFC2-210ENST00000493156 CPSF1Q10570 1443 aaKnown RBP28.01■■■□□ 2.07
RFC2-210ENST00000493156 STRN4Q9NRL3 753 aa28■■■□□ 2.07
RFC2-210ENST00000493156 MON2Q7Z3U7 1717 aa27.99■■■□□ 2.07
RFC2-210ENST00000493156 CARD11Q9BXL7 1154 aa27.99■■■□□ 2.07
RFC2-210ENST00000493156 RGPD1P0DJD0 1748 aa27.98■■■□□ 2.07
RFC2-210ENST00000493156 COL5A2P05997 1499 aaPredicted RBP27.98■■■□□ 2.07
RFC2-210ENST00000493156 ZNF692Q9BU19 519 aaPredicted RBP27.98■■■□□ 2.07
RFC2-210ENST00000493156 NLRP6P59044 892 aa27.97■■■□□ 2.07
RFC2-210ENST00000493156 SF3B2Q13435 895 aaKnown RBP27.97■■■□□ 2.07
RFC2-210ENST00000493156 ZRANB1Q9UGI0 708 aa27.97■■■□□ 2.07
RFC2-210ENST00000493156 DEFB132Q7Z7B7 95 aa27.96■■■□□ 2.07
RFC2-210ENST00000493156 TTC21BQ7Z4L5 1316 aa27.95■■■□□ 2.07
RFC2-210ENST00000493156 BARGINQ6ZT62 677 aa27.95■■■□□ 2.06
RFC2-210ENST00000493156 COL18A1P39060 1754 aa27.95■■■□□ 2.06
RFC2-210ENST00000493156 EVA1CP58658 441 aa27.94■■■□□ 2.06
RFC2-210ENST00000493156 TNS1Q9HBL0 1735 aaKnown RBP27.94■■■□□ 2.06
RFC2-210ENST00000493156 AATKQ6ZMQ8 1374 aa27.94■■■□□ 2.06
RFC2-210ENST00000493156 TTC21AQ8NDW8 1320 aa27.93■■■□□ 2.06
RFC2-210ENST00000493156 LARP1Q6PKG0 1096 aaKnown RBP27.93■■■□□ 2.06
RFC2-210ENST00000493156 USP54Q70EL1 1684 aa27.92■■■□□ 2.06
RFC2-210ENST00000493156 CD163L1Q9NR16 1453 aa27.91■■■□□ 2.06
RFC2-210ENST00000493156 PARP4Q9UKK3 1724 aaKnown RBP27.9■■■□□ 2.06
RFC2-210ENST00000493156 KTN1Q86UP2 1357 aaKnown RBP27.9■■■□□ 2.06
RFC2-210ENST00000493156 FAM182BQ5T319 152 aa27.89■■■□□ 2.06
RFC2-210ENST00000493156 TCP11L2Q8N4U5 519 aa27.89■■■□□ 2.06
RFC2-210ENST00000493156 USP35Q9P2H5 1018 aa27.89■■■□□ 2.06
RFC2-210ENST00000493156 THRAP3Q9Y2W1 955 aaKnown RBP27.89■■■□□ 2.06
RFC2-210ENST00000493156 DISP2A7MBM2 1401 aa27.89■■■□□ 2.06
RFC2-210ENST00000493156 CRB1P82279 1406 aa27.89■■■□□ 2.06
RFC2-210ENST00000493156 NFAT5O94916 1531 aa27.88■■■□□ 2.05
RFC2-210ENST00000493156 BAG6P46379 1132 aa27.88■■■□□ 2.05
RFC2-210ENST00000493156 KCNH5Q8NCM2 988 aa27.85■■■□□ 2.05
RFC2-210ENST00000493156 PUS7Q96PZ0 661 aaKnown RBP27.85■■■□□ 2.05
RFC2-210ENST00000493156 ABCC6O95255 1503 aa27.85■■■□□ 2.05
RFC2-210ENST00000493156 WNK3Q9BYP7 1800 aa27.84■■■□□ 2.05
RFC2-210ENST00000493156 ARHGEF25Q86VW2 580 aa27.84■■■□□ 2.05
RFC2-210ENST00000493156 USP31Q70CQ4 1352 aa27.84■■■□□ 2.05
RFC2-210ENST00000493156 FAM196AQ6ZSG2 479 aa27.83■■■□□ 2.05
RFC2-210ENST00000493156 ZBTB7CA1YPR0 619 aa27.81■■■□□ 2.04
RFC2-210ENST00000493156 TESK2Q96S53 571 aa27.81■■■□□ 2.04
RFC2-210ENST00000493156 LRRC37A3O60309 1634 aa27.81■■■□□ 2.04
RFC2-210ENST00000493156 RGPD5Q99666 1765 aa27.81■■■□□ 2.04
RFC2-210ENST00000493156 EDC4Q6P2E9 1401 aaKnown RBP27.79■■■□□ 2.04
RFC2-210ENST00000493156 WDR17Q8IZU2 1322 aa27.79■■■□□ 2.04
RFC2-210ENST00000493156 PDE3BQ13370 1112 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms