RNA–Protein interactions for RNA: ENST00000493107.5

SEC22C-216, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22C, Length 827 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-216ENST00000493107 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.76□□□□□ -0.37
SEC22C-216ENST00000493107 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
SEC22C-216ENST00000493107 ORAI2Q96SN7 254 aa12.76□□□□□ -0.37
SEC22C-216ENST00000493107 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
SEC22C-216ENST00000493107 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
SEC22C-216ENST00000493107 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SEC22C-216ENST00000493107 DCCP43146 1447 aa12.74□□□□□ -0.37
SEC22C-216ENST00000493107 MST1RQ04912 1400 aa12.74□□□□□ -0.37
SEC22C-216ENST00000493107 FBLN1P23142 703 aa12.73□□□□□ -0.37
SEC22C-216ENST00000493107 C14orf37Q86TY3 774 aa12.73□□□□□ -0.37
SEC22C-216ENST00000493107 NGDNQ8NEJ9 315 aaKnown RBP12.73□□□□□ -0.37
SEC22C-216ENST00000493107 CERKQ8TCT0 537 aa12.73□□□□□ -0.37
SEC22C-216ENST00000493107 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
SEC22C-216ENST00000493107 ESCO1Q5FWF5 840 aa12.72□□□□□ -0.37
SEC22C-216ENST00000493107 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
SEC22C-216ENST00000493107 NRKQ7Z2Y5 1582 aa12.72□□□□□ -0.37
SEC22C-216ENST00000493107 MON2Q7Z3U7 1717 aa12.71□□□□□ -0.37
SEC22C-216ENST00000493107 USP31Q70CQ4 1352 aa12.71□□□□□ -0.37
SEC22C-216ENST00000493107 MTHFSP49914 203 aa12.71□□□□□ -0.37
SEC22C-216ENST00000493107 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
SEC22C-216ENST00000493107 OVOS2A0A0J9YW53 1432 aa12.71□□□□□ -0.38
SEC22C-216ENST00000493107 OVOS2Q6IE36 1432 aa12.71□□□□□ -0.38
SEC22C-216ENST00000493107 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
SEC22C-216ENST00000493107 ATF3P18847 181 aa12.7□□□□□ -0.38
SEC22C-216ENST00000493107 CADPS2Q86UW7 1296 aa12.7□□□□□ -0.38
SEC22C-216ENST00000493107 PNPLA6Q8IY17 1366 aa12.69□□□□□ -0.38
SEC22C-216ENST00000493107 POLKQ9UBT6 870 aa12.69□□□□□ -0.38
SEC22C-216ENST00000493107 LTBP4Q8N2S1 1624 aa12.69□□□□□ -0.38
SEC22C-216ENST00000493107 MSH6P52701 1360 aa12.69□□□□□ -0.38
SEC22C-216ENST00000493107 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
SEC22C-216ENST00000493107 FOXO3O43524 673 aa12.68□□□□□ -0.38
SEC22C-216ENST00000493107 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
SEC22C-216ENST00000493107 RGPD8O14715 1765 aaPredicted RBP12.68□□□□□ -0.38
SEC22C-216ENST00000493107 INSRP06213 1382 aa12.68□□□□□ -0.38
SEC22C-216ENST00000493107 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
SEC22C-216ENST00000493107 NPM3O75607 178 aaKnown RBP12.67□□□□□ -0.38
SEC22C-216ENST00000493107 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
SEC22C-216ENST00000493107 COG3Q96JB2 828 aa12.67□□□□□ -0.38
SEC22C-216ENST00000493107 COL3A1P02461 1466 aaPredicted RBP12.66□□□□□ -0.38
SEC22C-216ENST00000493107 SMG6Q86US8 1419 aaKnown RBP12.66□□□□□ -0.38
SEC22C-216ENST00000493107 DDX17Q92841 729 aaKnown RBP12.66□□□□□ -0.38
SEC22C-216ENST00000493107 BRINP3Q76B58 766 aa12.65□□□□□ -0.38
SEC22C-216ENST00000493107 EMILIN1Q9Y6C2 1016 aa12.65□□□□□ -0.38
SEC22C-216ENST00000493107 ITSN1Q15811 1721 aa12.65□□□□□ -0.38
SEC22C-216ENST00000493107 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
SEC22C-216ENST00000493107 PSME1Q06323 249 aa12.64□□□□□ -0.39
SEC22C-216ENST00000493107 RRS1Q15050 365 aaKnown RBP12.64□□□□□ -0.39
SEC22C-216ENST00000493107 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
SEC22C-216ENST00000493107 SLAIN2Q9P270 581 aa12.64□□□□□ -0.39
SEC22C-216ENST00000493107 BLMP54132 1417 aaPredicted RBP12.63□□□□□ -0.39
SEC22C-216ENST00000493107 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEC22C-216ENST00000493107 NUTM2GQ5VZR2 741 aa12.63□□□□□ -0.39
SEC22C-216ENST00000493107 ABTB2Q8N961 1025 aa12.63□□□□□ -0.39
SEC22C-216ENST00000493107 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
SEC22C-216ENST00000493107 PIK3C2AO00443 1686 aa12.62□□□□□ -0.39
SEC22C-216ENST00000493107 KIF20BQ96Q89 1820 aa12.62□□□□□ -0.39
SEC22C-216ENST00000493107 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
SEC22C-216ENST00000493107 IL13P35225 146 aa12.61□□□□□ -0.39
SEC22C-216ENST00000493107 NLRP6P59044 892 aa12.61□□□□□ -0.39
SEC22C-216ENST00000493107 PXDNQ92626 1479 aa12.6□□□□□ -0.39
SEC22C-216ENST00000493107 SBNO1A3KN83 1393 aa12.6□□□□□ -0.39
SEC22C-216ENST00000493107 SENP3-EIF4A1A0A087X0R7 540 aa12.6□□□□□ -0.39
SEC22C-216ENST00000493107 SOS2Q07890 1332 aaPredicted RBP12.6□□□□□ -0.39
SEC22C-216ENST00000493107 MAP3K19Q56UN5 1328 aa12.6□□□□□ -0.39
SEC22C-216ENST00000493107 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
SEC22C-216ENST00000493107 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
SEC22C-216ENST00000493107 USP19O94966 1318 aa12.59□□□□□ -0.39
SEC22C-216ENST00000493107 ZBED9Q6R2W3 1325 aa12.59□□□□□ -0.39
SEC22C-216ENST00000493107 NPHP3Q7Z494 1330 aa12.59□□□□□ -0.39
SEC22C-216ENST00000493107 SHPRHQ149N8 1683 aa12.58□□□□□ -0.4
SEC22C-216ENST00000493107 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
SEC22C-216ENST00000493107 WDR43Q15061 677 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC22C-216ENST00000493107 CFAP53Q96M91 514 aa12.58□□□□□ -0.4
SEC22C-216ENST00000493107 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.4
SEC22C-216ENST00000493107 KIF1AQ12756 1690 aa12.57□□□□□ -0.4
SEC22C-216ENST00000493107 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
SEC22C-216ENST00000493107 HSP90AB2PQ58FF8 381 aa12.57□□□□□ -0.4
SEC22C-216ENST00000493107 PLEKHF1Q96S99 279 aa12.57□□□□□ -0.4
SEC22C-216ENST00000493107 SPATA31A3Q5VYP0 1347 aa12.57□□□□□ -0.4
SEC22C-216ENST00000493107 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
SEC22C-216ENST00000493107 SOX12O15370 315 aa12.56□□□□□ -0.4
SEC22C-216ENST00000493107 EIF4A2Q14240 407 aaKnown RBP12.56□□□□□ -0.4
SEC22C-216ENST00000493107 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
SEC22C-216ENST00000493107 SLIT3O75094 1523 aa12.56□□□□□ -0.4
SEC22C-216ENST00000493107 NFAT5O94916 1531 aa12.56□□□□□ -0.4
SEC22C-216ENST00000493107 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
SEC22C-216ENST00000493107 GCP02774 474 aa12.55□□□□□ -0.4
SEC22C-216ENST00000493107 CENPBP07199 599 aaPredicted RBP12.55□□□□□ -0.4
SEC22C-216ENST00000493107 ZNF521Q96K83 1311 aa12.55□□□□□ -0.4
SEC22C-216ENST00000493107 HOXC9P31274 260 aa12.54□□□□□ -0.4
SEC22C-216ENST00000493107 ARHGEF25Q86VW2 580 aa12.54□□□□□ -0.4
SEC22C-216ENST00000493107 TNS3Q68CZ2 1445 aa12.54□□□□□ -0.4
SEC22C-216ENST00000493107 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
SEC22C-216ENST00000493107 APAF1O14727 1248 aa12.53□□□□□ -0.4
SEC22C-216ENST00000493107 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
SEC22C-216ENST00000493107 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
SEC22C-216ENST00000493107 MAPK8IP2Q13387 824 aaPredicted RBP12.53□□□□□ -0.4
SEC22C-216ENST00000493107 RUNDC1Q96C34 613 aa12.53□□□□□ -0.4
SEC22C-216ENST00000493107 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
SEC22C-216ENST00000493107 ALS2Q96Q42 1657 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms