RNA–Protein interactions for RNA: ENST00000493018.5

RPL35-204, Transcript of ribosomal protein L35, humanhuman

TSL 3

Gene RPL35, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-204ENST00000493018 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.52
RPL35-204ENST00000493018 TTC21BQ7Z4L5 1316 aa18.27■□□□□ 0.52
RPL35-204ENST00000493018 ORAI2Q96SN7 254 aa18.27■□□□□ 0.52
RPL35-204ENST00000493018 SLAIN2Q9P270 581 aa18.27■□□□□ 0.52
RPL35-204ENST00000493018 IQSEC2Q5JU85 1478 aa18.26■□□□□ 0.51
RPL35-204ENST00000493018 NPHP3Q7Z494 1330 aa18.25■□□□□ 0.51
RPL35-204ENST00000493018 FYB1O15117 783 aa18.25■□□□□ 0.51
RPL35-204ENST00000493018 SSH2Q76I76 1423 aa18.24■□□□□ 0.51
RPL35-204ENST00000493018 NLRP13Q86W25 1043 aa18.24■□□□□ 0.51
RPL35-204ENST00000493018 COG3Q96JB2 828 aa18.24■□□□□ 0.51
RPL35-204ENST00000493018 GGNBP2Q9H3C7 697 aa18.24■□□□□ 0.51
RPL35-204ENST00000493018 USP54Q70EL1 1684 aa18.23■□□□□ 0.51
RPL35-204ENST00000493018 FOXO3O43524 673 aa18.23■□□□□ 0.51
RPL35-204ENST00000493018 PAK3O75914 559 aaPredicted RBP18.23■□□□□ 0.51
RPL35-204ENST00000493018 PIK3C2AO00443 1686 aa18.22■□□□□ 0.51
RPL35-204ENST00000493018 TRPM3Q9HCF6 1732 aaPredicted RBP18.22■□□□□ 0.51
RPL35-204ENST00000493018 KRT28Q7Z3Y7 464 aa18.21■□□□□ 0.51
RPL35-204ENST00000493018 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
RPL35-204ENST00000493018 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
RPL35-204ENST00000493018 TOM1O60784 492 aa18.2■□□□□ 0.5
RPL35-204ENST00000493018 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
RPL35-204ENST00000493018 BRINP3Q76B58 766 aa18.2■□□□□ 0.5
RPL35-204ENST00000493018 NME9Q86XW9 330 aa18.2■□□□□ 0.5
RPL35-204ENST00000493018 MRS2Q9HD23 443 aa18.2■□□□□ 0.5
RPL35-204ENST00000493018 ABTB2Q8N961 1025 aa18.19■□□□□ 0.5
RPL35-204ENST00000493018 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
RPL35-204ENST00000493018 ROBO1Q9Y6N7 1651 aa18.18■□□□□ 0.5
RPL35-204ENST00000493018 USP31Q70CQ4 1352 aa18.18■□□□□ 0.5
RPL35-204ENST00000493018 OVOS2A0A0J9YW53 1432 aa18.18■□□□□ 0.5
RPL35-204ENST00000493018 OVOS2Q6IE36 1432 aa18.18■□□□□ 0.5
RPL35-204ENST00000493018 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
RPL35-204ENST00000493018 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
RPL35-204ENST00000493018 ALS2Q96Q42 1657 aa18.17■□□□□ 0.5
RPL35-204ENST00000493018 NLRP6P59044 892 aa18.16■□□□□ 0.5
RPL35-204ENST00000493018 CFAP53Q96M91 514 aa18.16■□□□□ 0.5
RPL35-204ENST00000493018 PXDNQ92626 1479 aa18.15■□□□□ 0.5
RPL35-204ENST00000493018 AATKQ6ZMQ8 1374 aa18.15■□□□□ 0.5
RPL35-204ENST00000493018 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
RPL35-204ENST00000493018 ARHGEF10O15013 1369 aa18.14■□□□□ 0.49
RPL35-204ENST00000493018 TNS3Q68CZ2 1445 aa18.14■□□□□ 0.49
RPL35-204ENST00000493018 XPCQ01831 940 aaPredicted RBP18.13■□□□□ 0.49
RPL35-204ENST00000493018 LMOD2Q6P5Q4 547 aa18.13■□□□□ 0.49
RPL35-204ENST00000493018 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
RPL35-204ENST00000493018 KCNH5Q8NCM2 988 aa18.12■□□□□ 0.49
RPL35-204ENST00000493018 CERKQ8TCT0 537 aa18.12■□□□□ 0.49
RPL35-204ENST00000493018 ZRANB1Q9UGI0 708 aa18.12■□□□□ 0.49
RPL35-204ENST00000493018 SOS2Q07890 1332 aaPredicted RBP18.11■□□□□ 0.49
RPL35-204ENST00000493018 UBAP1LF5GYI3 381 aa18.1■□□□□ 0.49
RPL35-204ENST00000493018 MTHFSP49914 203 aa18.1■□□□□ 0.49
RPL35-204ENST00000493018 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
RPL35-204ENST00000493018 SMG6Q86US8 1419 aaKnown RBP18.09■□□□□ 0.49
RPL35-204ENST00000493018 SPATA31A3Q5VYP0 1347 aa18.09■□□□□ 0.49
RPL35-204ENST00000493018 DDX17Q92841 729 aaKnown RBP18.09■□□□□ 0.49
RPL35-204ENST00000493018 LTN1O94822 1766 aa18.09■□□□□ 0.49
RPL35-204ENST00000493018 SLIT3O75094 1523 aa18.08■□□□□ 0.49
RPL35-204ENST00000493018 WDR43Q15061 677 aaKnown RBP eCLIP18.08■□□□□ 0.48
RPL35-204ENST00000493018 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.48
RPL35-204ENST00000493018 PHRF1Q9P1Y6 1649 aaKnown RBP18.08■□□□□ 0.48
RPL35-204ENST00000493018 MED1Q15648 1581 aaPredicted RBP18.08■□□□□ 0.48
RPL35-204ENST00000493018 CDK12Q9NYV4 1490 aaPredicted RBP18.07■□□□□ 0.48
RPL35-204ENST00000493018 CCDC184Q52MB2 194 aa18.07■□□□□ 0.48
RPL35-204ENST00000493018 KIF24Q5T7B8 1368 aa18.06■□□□□ 0.48
RPL35-204ENST00000493018 PIP4K2BP78356 416 aa18.06■□□□□ 0.48
RPL35-204ENST00000493018 FAM9BQ8IZU0 186 aa18.06■□□□□ 0.48
RPL35-204ENST00000493018 POLKQ9UBT6 870 aa18.06■□□□□ 0.48
RPL35-204ENST00000493018 USP19O94966 1318 aa18.05■□□□□ 0.48
RPL35-204ENST00000493018 PPM1GO15355 546 aaPredicted RBP18.05■□□□□ 0.48
RPL35-204ENST00000493018 SOX12O15370 315 aa18.05■□□□□ 0.48
RPL35-204ENST00000493018 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
RPL35-204ENST00000493018 LRRC59Q96AG4 307 aaKnown RBP18.05■□□□□ 0.48
RPL35-204ENST00000493018 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
RPL35-204ENST00000493018 CRYBG1Q9Y4K1 1723 aa18.03■□□□□ 0.48
RPL35-204ENST00000493018 NFAT5O94916 1531 aa18.03■□□□□ 0.48
RPL35-204ENST00000493018 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
RPL35-204ENST00000493018 RTL1A6NKG5 1358 aa18.03■□□□□ 0.48
RPL35-204ENST00000493018 INSRP06213 1382 aa18.03■□□□□ 0.48
RPL35-204ENST00000493018 FLT4P35916 1363 aa18.03■□□□□ 0.48
RPL35-204ENST00000493018 GCP02774 474 aa18.02■□□□□ 0.48
RPL35-204ENST00000493018 AMPHP49418 695 aa18.02■□□□□ 0.48
RPL35-204ENST00000493018 RRS1Q15050 365 aaKnown RBP18.02■□□□□ 0.48
RPL35-204ENST00000493018 EMILIN1Q9Y6C2 1016 aa18.02■□□□□ 0.48
RPL35-204ENST00000493018 PNPLA6Q8IY17 1366 aa18.02■□□□□ 0.47
RPL35-204ENST00000493018 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
RPL35-204ENST00000493018 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
RPL35-204ENST00000493018 ABCA3Q99758 1704 aa18.01■□□□□ 0.47
RPL35-204ENST00000493018 MAP3K19Q56UN5 1328 aa18■□□□□ 0.47
RPL35-204ENST00000493018 HAP1P54257 671 aaPredicted RBP18■□□□□ 0.47
RPL35-204ENST00000493018 COL22A1Q8NFW1 1626 aaPredicted RBP18■□□□□ 0.47
RPL35-204ENST00000493018 PEAK1Q9H792 1746 aa18■□□□□ 0.47
RPL35-204ENST00000493018 COL3A1P02461 1466 aaPredicted RBP18■□□□□ 0.47
RPL35-204ENST00000493018 FBLN1P23142 703 aa17.99■□□□□ 0.47
RPL35-204ENST00000493018 ABCC6O95255 1503 aa17.98■□□□□ 0.47
RPL35-204ENST00000493018 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
RPL35-204ENST00000493018 PNNQ9H307 717 aaKnown RBP17.98■□□□□ 0.47
RPL35-204ENST00000493018 PLEKHG5O94827 1062 aa17.97■□□□□ 0.47
RPL35-204ENST00000493018 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
RPL35-204ENST00000493018 U2SURPO15042 1029 aaKnown RBP17.95■□□□□ 0.46
RPL35-204ENST00000493018 HOXC9P31274 260 aa17.95■□□□□ 0.46
RPL35-204ENST00000493018 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
RPL35-204ENST00000493018 BLMP54132 1417 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms