RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 SRPK2P78362 688 aaKnown RBP17.89■□□□□ 0.45
COL6A1-205ENST00000492851 ACEP12821 1306 aa17.89■□□□□ 0.45
COL6A1-205ENST00000492851 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
COL6A1-205ENST00000492851 ITSN1Q15811 1721 aa17.88■□□□□ 0.45
COL6A1-205ENST00000492851 TRPM3Q9HCF6 1732 aaPredicted RBP17.88■□□□□ 0.45
COL6A1-205ENST00000492851 GLI3P10071 1580 aa17.87■□□□□ 0.45
COL6A1-205ENST00000492851 SF3B2Q13435 895 aaKnown RBP17.87■□□□□ 0.45
COL6A1-205ENST00000492851 ALS2Q96Q42 1657 aa17.87■□□□□ 0.45
COL6A1-205ENST00000492851 KRT27Q7Z3Y8 459 aa17.86■□□□□ 0.45
COL6A1-205ENST00000492851 ZRANB1Q9UGI0 708 aa17.86■□□□□ 0.45
COL6A1-205ENST00000492851 BRD4O60885 1362 aaPredicted RBP17.86■□□□□ 0.45
COL6A1-205ENST00000492851 BLMP54132 1417 aaPredicted RBP17.85■□□□□ 0.45
COL6A1-205ENST00000492851 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
COL6A1-205ENST00000492851 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
COL6A1-205ENST00000492851 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
COL6A1-205ENST00000492851 A0A0G2JS52 829 aa17.84■□□□□ 0.45
COL6A1-205ENST00000492851 MYT1Q01538 1121 aa17.84■□□□□ 0.45
COL6A1-205ENST00000492851 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
COL6A1-205ENST00000492851 ABCA3Q99758 1704 aa17.84■□□□□ 0.45
COL6A1-205ENST00000492851 PLCH1Q4KWH8 1693 aa17.83■□□□□ 0.45
COL6A1-205ENST00000492851 NLRP13Q86W25 1043 aa17.83■□□□□ 0.44
COL6A1-205ENST00000492851 EVC2Q86UK5 1308 aa17.82■□□□□ 0.44
COL6A1-205ENST00000492851 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
COL6A1-205ENST00000492851 CABP2Q9NPB3 220 aa17.82■□□□□ 0.44
COL6A1-205ENST00000492851 PPIP5K1Q6PFW1 1433 aa17.81■□□□□ 0.44
COL6A1-205ENST00000492851 SPATA31A5Q5VU36 1347 aa17.81■□□□□ 0.44
COL6A1-205ENST00000492851 SPATA31A7Q8IWB4 1347 aa17.81■□□□□ 0.44
COL6A1-205ENST00000492851 KIAA0232Q92628 1395 aa17.8■□□□□ 0.44
COL6A1-205ENST00000492851 EVA1CP58658 441 aa17.8■□□□□ 0.44
COL6A1-205ENST00000492851 ZC3H6P61129 1189 aaKnown RBP17.8■□□□□ 0.44
COL6A1-205ENST00000492851 ROCK2O75116 1388 aaKnown RBP17.79■□□□□ 0.44
COL6A1-205ENST00000492851 NUTM2GQ5VZR2 741 aa17.79■□□□□ 0.44
COL6A1-205ENST00000492851 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
COL6A1-205ENST00000492851 CABP1Q9NZU7 370 aa17.79■□□□□ 0.44
COL6A1-205ENST00000492851 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.44
COL6A1-205ENST00000492851 CPDO75976 1380 aa17.77■□□□□ 0.43
COL6A1-205ENST00000492851 SPATA31A1Q5TZJ5 1347 aa17.76■□□□□ 0.43
COL6A1-205ENST00000492851 GCP02774 474 aa17.76■□□□□ 0.43
COL6A1-205ENST00000492851 CHRNA2Q15822 529 aa17.76■□□□□ 0.43
COL6A1-205ENST00000492851 STRN4Q9NRL3 753 aa17.76■□□□□ 0.43
COL6A1-205ENST00000492851 NRAPQ86VF7 1730 aa17.75■□□□□ 0.43
COL6A1-205ENST00000492851 USP19O94966 1318 aa17.75■□□□□ 0.43
COL6A1-205ENST00000492851 BAG6P46379 1132 aa17.75■□□□□ 0.43
COL6A1-205ENST00000492851 NLRP6P59044 892 aa17.74■□□□□ 0.43
COL6A1-205ENST00000492851 CRYBG1Q9Y4K1 1723 aa17.74■□□□□ 0.43
COL6A1-205ENST00000492851 EP400Q96L91 3159 aa17.73■□□□□ 0.43
COL6A1-205ENST00000492851 BARGINQ6ZT62 677 aa17.73■□□□□ 0.43
COL6A1-205ENST00000492851 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
COL6A1-205ENST00000492851 QRICH2Q9H0J4 1663 aa17.72■□□□□ 0.43
COL6A1-205ENST00000492851 DEFB132Q7Z7B7 95 aa17.72■□□□□ 0.43
COL6A1-205ENST00000492851 THRAP3Q9Y2W1 955 aaKnown RBP17.72■□□□□ 0.43
COL6A1-205ENST00000492851 USP6P35125 1406 aa17.72■□□□□ 0.43
COL6A1-205ENST00000492851 BRWD3Q6RI45 1802 aa17.71■□□□□ 0.43
COL6A1-205ENST00000492851 FAM196AQ6ZSG2 479 aa17.71■□□□□ 0.43
COL6A1-205ENST00000492851 PHRF1Q9P1Y6 1649 aaKnown RBP17.71■□□□□ 0.43
COL6A1-205ENST00000492851 TONSLQ96HA7 1378 aa17.7■□□□□ 0.42
COL6A1-205ENST00000492851 PDE3BQ13370 1112 aa17.7■□□□□ 0.42
COL6A1-205ENST00000492851 TCP11L2Q8N4U5 519 aa17.7■□□□□ 0.42
COL6A1-205ENST00000492851 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
COL6A1-205ENST00000492851 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
COL6A1-205ENST00000492851 C11orf95C9JLR9 678 aaPredicted RBP17.69■□□□□ 0.42
COL6A1-205ENST00000492851 SLC24A1O60721 1099 aa17.69■□□□□ 0.42
COL6A1-205ENST00000492851 USP35Q9P2H5 1018 aa17.69■□□□□ 0.42
COL6A1-205ENST00000492851 SSH2Q76I76 1423 aa17.69■□□□□ 0.42
COL6A1-205ENST00000492851 TTC21AQ8NDW8 1320 aa17.69■□□□□ 0.42
COL6A1-205ENST00000492851 SBNO2Q9Y2G9 1366 aa17.68■□□□□ 0.42
COL6A1-205ENST00000492851 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
COL6A1-205ENST00000492851 LARP1Q6PKG0 1096 aaKnown RBP17.68■□□□□ 0.42
COL6A1-205ENST00000492851 AATKQ6ZMQ8 1374 aa17.66■□□□□ 0.42
COL6A1-205ENST00000492851 NRKQ7Z2Y5 1582 aa17.66■□□□□ 0.42
COL6A1-205ENST00000492851 CAMTA1Q9Y6Y1 1673 aa17.66■□□□□ 0.42
COL6A1-205ENST00000492851 TTC21BQ7Z4L5 1316 aa17.66■□□□□ 0.42
COL6A1-205ENST00000492851 THSD7AQ9UPZ6 1657 aa17.65■□□□□ 0.42
COL6A1-205ENST00000492851 PUS7Q96PZ0 661 aaKnown RBP17.65■□□□□ 0.42
COL6A1-205ENST00000492851 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
COL6A1-205ENST00000492851 KTN1Q86UP2 1357 aaKnown RBP17.64■□□□□ 0.41
COL6A1-205ENST00000492851 ZBTB7CA1YPR0 619 aa17.63■□□□□ 0.41
COL6A1-205ENST00000492851 CRB1P82279 1406 aa17.63■□□□□ 0.41
COL6A1-205ENST00000492851 CPSF1Q10570 1443 aaKnown RBP17.63■□□□□ 0.41
COL6A1-205ENST00000492851 SLIT3O75094 1523 aa17.62■□□□□ 0.41
COL6A1-205ENST00000492851 EN1Q05925 392 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-205ENST00000492851 DISP2A7MBM2 1401 aa17.62■□□□□ 0.41
COL6A1-205ENST00000492851 COL5A2P05997 1499 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-205ENST00000492851 LMO7Q8WWI1 1683 aa17.61■□□□□ 0.41
COL6A1-205ENST00000492851 TOM1L2Q6ZVM7 507 aa17.61■□□□□ 0.41
COL6A1-205ENST00000492851 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-205ENST00000492851 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
COL6A1-205ENST00000492851 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-205ENST00000492851 TRIM37O94972 964 aa17.6■□□□□ 0.41
COL6A1-205ENST00000492851 TMC1Q8TDI8 760 aa17.6■□□□□ 0.41
COL6A1-205ENST00000492851 TERF2IPQ9NYB0 399 aa17.6■□□□□ 0.41
COL6A1-205ENST00000492851 PARD3Q8TEW0 1356 aa17.6■□□□□ 0.41
COL6A1-205ENST00000492851 RGPD1P0DJD0 1748 aa17.59■□□□□ 0.41
COL6A1-205ENST00000492851 APBA3O96018 575 aa17.59■□□□□ 0.41
COL6A1-205ENST00000492851 WDR17Q8IZU2 1322 aa17.58■□□□□ 0.4
COL6A1-205ENST00000492851 DDB1Q16531 1140 aa17.57■□□□□ 0.4
COL6A1-205ENST00000492851 USP31Q70CQ4 1352 aa17.56■□□□□ 0.4
COL6A1-205ENST00000492851 CSB-PGBD3P0DP91 1061 aa17.56■□□□□ 0.4
COL6A1-205ENST00000492851 CAMKK2Q96RR4 588 aa17.56■□□□□ 0.4
COL6A1-205ENST00000492851 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms