RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 USP6P35125 1406 aa15.02■□□□□ -0
CDC42SE1-206ENST00000492796 ST20-MTHFSA0A0A6YYL1 179 aa15.02■□□□□ -0
CDC42SE1-206ENST00000492796 PUS7Q96PZ0 661 aaKnown RBP15.02■□□□□ -0
CDC42SE1-206ENST00000492796 CABP1Q9NZU7 370 aa15.02■□□□□ -0
CDC42SE1-206ENST00000492796 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.02□□□□□ -0.01
CDC42SE1-206ENST00000492796 MON2Q7Z3U7 1717 aa15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 PAK3O75914 559 aaPredicted RBP15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 HAP1P54257 671 aaPredicted RBP15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 POTEAQ6S8J7 498 aa15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 NGLY1Q96IV0 654 aa15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 TESK2Q96S53 571 aa15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 NRKQ7Z2Y5 1582 aa15.01□□□□□ -0.01
CDC42SE1-206ENST00000492796 PLCH1Q4KWH8 1693 aa15□□□□□ -0.01
CDC42SE1-206ENST00000492796 FNBP4Q8N3X1 1017 aaPredicted RBP15□□□□□ -0.01
CDC42SE1-206ENST00000492796 NWD2Q9ULI1 1742 aa15□□□□□ -0.01
CDC42SE1-206ENST00000492796 CPSF1Q10570 1443 aaKnown RBP14.99□□□□□ -0.01
CDC42SE1-206ENST00000492796 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
CDC42SE1-206ENST00000492796 SLIT2O94813 1529 aa14.98□□□□□ -0.01
CDC42SE1-206ENST00000492796 CABLES1Q8TDN4 633 aa14.98□□□□□ -0.01
CDC42SE1-206ENST00000492796 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
CDC42SE1-206ENST00000492796 SSH2Q76I76 1423 aa14.98□□□□□ -0.01
CDC42SE1-206ENST00000492796 COL14A1Q05707 1796 aaKnown RBP14.98□□□□□ -0.01
CDC42SE1-206ENST00000492796 USP21Q9UK80 565 aa14.97□□□□□ -0.01
CDC42SE1-206ENST00000492796 PIK3C2AO00443 1686 aa14.97□□□□□ -0.01
CDC42SE1-206ENST00000492796 CD163L1Q9NR16 1453 aa14.96□□□□□ -0.01
CDC42SE1-206ENST00000492796 CDK12Q9NYV4 1490 aaPredicted RBP14.96□□□□□ -0.01
CDC42SE1-206ENST00000492796 TMF1P82094 1093 aa14.96□□□□□ -0.01
CDC42SE1-206ENST00000492796 ABTB2Q8N961 1025 aa14.96□□□□□ -0.01
CDC42SE1-206ENST00000492796 BCL9LQ86UU0 1499 aa14.95□□□□□ -0.02
CDC42SE1-206ENST00000492796 ATRNO75882 1429 aa14.95□□□□□ -0.02
CDC42SE1-206ENST00000492796 TRPC5Q9UL62 973 aaPredicted RBP14.95□□□□□ -0.02
CDC42SE1-206ENST00000492796 KTN1Q86UP2 1357 aaKnown RBP14.95□□□□□ -0.02
CDC42SE1-206ENST00000492796 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
CDC42SE1-206ENST00000492796 USP19O94966 1318 aa14.94□□□□□ -0.02
CDC42SE1-206ENST00000492796 SLIT3O75094 1523 aa14.94□□□□□ -0.02
CDC42SE1-206ENST00000492796 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
CDC42SE1-206ENST00000492796 RXRBP28702 533 aa14.94□□□□□ -0.02
CDC42SE1-206ENST00000492796 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
CDC42SE1-206ENST00000492796 USP54Q70EL1 1684 aa14.93□□□□□ -0.02
CDC42SE1-206ENST00000492796 TTC21AQ8NDW8 1320 aa14.93□□□□□ -0.02
CDC42SE1-206ENST00000492796 CDCA8Q53HL2 280 aa14.93□□□□□ -0.02
CDC42SE1-206ENST00000492796 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
CDC42SE1-206ENST00000492796 TMC1Q8TDI8 760 aa14.93□□□□□ -0.02
CDC42SE1-206ENST00000492796 RBM6P78332 1123 aaKnown RBP14.92□□□□□ -0.02
CDC42SE1-206ENST00000492796 HDGFL2Q7Z4V5 671 aaPredicted RBP14.92□□□□□ -0.02
CDC42SE1-206ENST00000492796 UNC5CLQ8IV45 518 aa14.92□□□□□ -0.02
CDC42SE1-206ENST00000492796 TERF2IPQ9NYB0 399 aa14.92□□□□□ -0.02
CDC42SE1-206ENST00000492796 EDC4Q6P2E9 1401 aaKnown RBP14.92□□□□□ -0.02
CDC42SE1-206ENST00000492796 TTC21BQ7Z4L5 1316 aa14.92□□□□□ -0.02
CDC42SE1-206ENST00000492796 A0A1W2PP64 1363 aa14.91□□□□□ -0.02
CDC42SE1-206ENST00000492796 EIF4G2P78344 907 aaKnown RBP eCLIP14.91□□□□□ -0.02
CDC42SE1-206ENST00000492796 NUTM2GQ5VZR2 741 aa14.91□□□□□ -0.02
CDC42SE1-206ENST00000492796 MYOM1P52179 1685 aa14.9□□□□□ -0.02
CDC42SE1-206ENST00000492796 CPDO75976 1380 aa14.9□□□□□ -0.02
CDC42SE1-206ENST00000492796 SLC12A5Q9H2X9 1139 aa14.9□□□□□ -0.02
CDC42SE1-206ENST00000492796 KIAA0232Q92628 1395 aa14.89□□□□□ -0.03
CDC42SE1-206ENST00000492796 FAM83GA6ND36 823 aa14.89□□□□□ -0.03
CDC42SE1-206ENST00000492796 NLRP6P59044 892 aa14.89□□□□□ -0.03
CDC42SE1-206ENST00000492796 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
CDC42SE1-206ENST00000492796 RGS12O14924 1447 aa14.89□□□□□ -0.03
CDC42SE1-206ENST00000492796 ANKRD36BQ8N2N9 1353 aa14.88□□□□□ -0.03
CDC42SE1-206ENST00000492796 LMO7Q8WWI1 1683 aa14.88□□□□□ -0.03
CDC42SE1-206ENST00000492796 GLI3P10071 1580 aa14.88□□□□□ -0.03
CDC42SE1-206ENST00000492796 USP31Q70CQ4 1352 aa14.87□□□□□ -0.03
CDC42SE1-206ENST00000492796 GCP02774 474 aa14.87□□□□□ -0.03
CDC42SE1-206ENST00000492796 VPS72Q15906 364 aa14.87□□□□□ -0.03
CDC42SE1-206ENST00000492796 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
CDC42SE1-206ENST00000492796 GJD4Q96KN9 370 aaPredicted RBP14.86□□□□□ -0.03
CDC42SE1-206ENST00000492796 HSPA5P11021 654 aaKnown RBP14.85□□□□□ -0.03
CDC42SE1-206ENST00000492796 ZC3H6P61129 1189 aaKnown RBP14.85□□□□□ -0.03
CDC42SE1-206ENST00000492796 KCNH5Q8NCM2 988 aa14.85□□□□□ -0.03
CDC42SE1-206ENST00000492796 NFAT5O94916 1531 aa14.85□□□□□ -0.03
CDC42SE1-206ENST00000492796 ABCC6O95255 1503 aa14.85□□□□□ -0.03
CDC42SE1-206ENST00000492796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.84□□□□□ -0.03
CDC42SE1-206ENST00000492796 OVOS2A0A0J9YW53 1432 aa14.83□□□□□ -0.03
CDC42SE1-206ENST00000492796 OVOS2Q6IE36 1432 aa14.83□□□□□ -0.03
CDC42SE1-206ENST00000492796 CAMTA1Q9Y6Y1 1673 aa14.83□□□□□ -0.04
CDC42SE1-206ENST00000492796 COL18A1P39060 1754 aa14.83□□□□□ -0.04
CDC42SE1-206ENST00000492796 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
CDC42SE1-206ENST00000492796 CHRNA2Q15822 529 aa14.82□□□□□ -0.04
CDC42SE1-206ENST00000492796 NME9Q86XW9 330 aa14.82□□□□□ -0.04
CDC42SE1-206ENST00000492796 AATKQ6ZMQ8 1374 aa14.82□□□□□ -0.04
CDC42SE1-206ENST00000492796 CCDC9Q9Y3X0 531 aaKnown RBP14.81□□□□□ -0.04
CDC42SE1-206ENST00000492796 COL5A2P05997 1499 aaPredicted RBP14.81□□□□□ -0.04
CDC42SE1-206ENST00000492796 LTN1O94822 1766 aa14.8□□□□□ -0.04
CDC42SE1-206ENST00000492796 SPATA31A5Q5VU36 1347 aa14.79□□□□□ -0.04
CDC42SE1-206ENST00000492796 ARHGEF25Q86VW2 580 aa14.79□□□□□ -0.04
CDC42SE1-206ENST00000492796 SPATA31A7Q8IWB4 1347 aa14.79□□□□□ -0.04
CDC42SE1-206ENST00000492796 THSD7AQ9UPZ6 1657 aa14.78□□□□□ -0.04
CDC42SE1-206ENST00000492796 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
CDC42SE1-206ENST00000492796 ZRANB1Q9UGI0 708 aa14.78□□□□□ -0.04
CDC42SE1-206ENST00000492796 BRWD3Q6RI45 1802 aa14.78□□□□□ -0.04
CDC42SE1-206ENST00000492796 NSD3Q9BZ95 1437 aa14.77□□□□□ -0.04
CDC42SE1-206ENST00000492796 EVA1CP58658 441 aa14.77□□□□□ -0.05
CDC42SE1-206ENST00000492796 STRN4Q9NRL3 753 aa14.77□□□□□ -0.05
CDC42SE1-206ENST00000492796 CRB1P82279 1406 aa14.76□□□□□ -0.05
CDC42SE1-206ENST00000492796 RGPD5Q99666 1765 aa14.76□□□□□ -0.05
CDC42SE1-206ENST00000492796 SPATA31A1Q5TZJ5 1347 aa14.76□□□□□ -0.05
CDC42SE1-206ENST00000492796 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
CDC42SE1-206ENST00000492796 SOX12O15370 315 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms