RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 POLR3AO14802 1390 aaPredicted RBP26.7■■□□□ 1.86
CHD1L-209ENST00000492728 TRPM1Q7Z4N2 1603 aa26.69■■□□□ 1.86
CHD1L-209ENST00000492728 QRICH2Q9H0J4 1663 aa26.69■■□□□ 1.86
CHD1L-209ENST00000492728 BRWD3Q6RI45 1802 aa26.68■■□□□ 1.86
CHD1L-209ENST00000492728 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
CHD1L-209ENST00000492728 COL14A1Q05707 1796 aaKnown RBP26.67■■□□□ 1.86
CHD1L-209ENST00000492728 PHRF1Q9P1Y6 1649 aaKnown RBP26.67■■□□□ 1.86
CHD1L-209ENST00000492728 ACEP12821 1306 aa26.66■■□□□ 1.86
CHD1L-209ENST00000492728 CENPJQ9HC77 1338 aaPredicted RBP26.66■■□□□ 1.86
CHD1L-209ENST00000492728 PLEKHG3A1L390 1219 aa26.64■■□□□ 1.86
CHD1L-209ENST00000492728 CCDC61Q9Y6R9 512 aa26.64■■□□□ 1.86
CHD1L-209ENST00000492728 NEUROD1Q13562 356 aa26.63■■□□□ 1.85
CHD1L-209ENST00000492728 BTG4Q9NY30 223 aa26.63■■□□□ 1.85
CHD1L-209ENST00000492728 NBPF8Q3BBV2 869 aa26.62■■□□□ 1.85
CHD1L-209ENST00000492728 SEPT12Q8IYM1 358 aa26.62■■□□□ 1.85
CHD1L-209ENST00000492728 NUTM2GQ5VZR2 741 aa26.61■■□□□ 1.85
CHD1L-209ENST00000492728 CABP2Q9NPB3 220 aa26.61■■□□□ 1.85
CHD1L-209ENST00000492728 CCDC9Q9Y3X0 531 aaKnown RBP26.61■■□□□ 1.85
CHD1L-209ENST00000492728 PPIP5K1Q6PFW1 1433 aa26.61■■□□□ 1.85
CHD1L-209ENST00000492728 ONECUT3O60422 494 aaPredicted RBP26.6■■□□□ 1.85
CHD1L-209ENST00000492728 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
CHD1L-209ENST00000492728 KIAA0232Q92628 1395 aa26.58■■□□□ 1.85
CHD1L-209ENST00000492728 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
CHD1L-209ENST00000492728 PRDM11Q9NQV5 511 aa26.56■■□□□ 1.84
CHD1L-209ENST00000492728 ROCK2O75116 1388 aaKnown RBP26.55■■□□□ 1.84
CHD1L-209ENST00000492728 CHRNA2Q15822 529 aa26.54■■□□□ 1.84
CHD1L-209ENST00000492728 FAM98CQ17RN3 349 aaKnown RBP26.54■■□□□ 1.84
CHD1L-209ENST00000492728 SPATA31A5Q5VU36 1347 aa26.53■■□□□ 1.84
CHD1L-209ENST00000492728 SPATA31A7Q8IWB4 1347 aa26.53■■□□□ 1.84
CHD1L-209ENST00000492728 USP19O94966 1318 aa26.52■■□□□ 1.84
CHD1L-209ENST00000492728 BLMP54132 1417 aaPredicted RBP26.52■■□□□ 1.84
CHD1L-209ENST00000492728 ZC3H6P61129 1189 aaKnown RBP26.52■■□□□ 1.84
CHD1L-209ENST00000492728 THSD7AQ9UPZ6 1657 aa26.52■■□□□ 1.84
CHD1L-209ENST00000492728 USP6P35125 1406 aa26.49■■□□□ 1.83
CHD1L-209ENST00000492728 SRCAPQ6ZRS2 3230 aa26.49■■□□□ 1.83
CHD1L-209ENST00000492728 KRT27Q7Z3Y8 459 aa26.49■■□□□ 1.83
CHD1L-209ENST00000492728 CCDC125Q86Z20 511 aa26.49■■□□□ 1.83
CHD1L-209ENST00000492728 ABTB2Q8N961 1025 aa26.49■■□□□ 1.83
CHD1L-209ENST00000492728 CABP1Q9NZU7 370 aa26.49■■□□□ 1.83
CHD1L-209ENST00000492728 LMO7Q8WWI1 1683 aa26.48■■□□□ 1.83
CHD1L-209ENST00000492728 SSH2Q76I76 1423 aa26.48■■□□□ 1.83
CHD1L-209ENST00000492728 A0A0G2JS52 829 aa26.46■■□□□ 1.83
CHD1L-209ENST00000492728 MYT1Q01538 1121 aa26.46■■□□□ 1.83
CHD1L-209ENST00000492728 DEFB132Q7Z7B7 95 aa26.46■■□□□ 1.83
CHD1L-209ENST00000492728 CAMTA1Q9Y6Y1 1673 aa26.46■■□□□ 1.83
CHD1L-209ENST00000492728 EVC2Q86UK5 1308 aa26.45■■□□□ 1.83
CHD1L-209ENST00000492728 CPDO75976 1380 aa26.45■■□□□ 1.82
CHD1L-209ENST00000492728 PIK3C2AO00443 1686 aa26.44■■□□□ 1.82
CHD1L-209ENST00000492728 SPATA31A1Q5TZJ5 1347 aa26.44■■□□□ 1.82
CHD1L-209ENST00000492728 STRN4Q9NRL3 753 aa26.43■■□□□ 1.82
CHD1L-209ENST00000492728 SLIT3O75094 1523 aa26.43■■□□□ 1.82
CHD1L-209ENST00000492728 FAM182BQ5T319 152 aa26.42■■□□□ 1.82
CHD1L-209ENST00000492728 BRD4O60885 1362 aaPredicted RBP26.42■■□□□ 1.82
CHD1L-209ENST00000492728 GCP02774 474 aa26.41■■□□□ 1.82
CHD1L-209ENST00000492728 AKAP12Q02952 1782 aa26.4■■□□□ 1.82
CHD1L-209ENST00000492728 NLRP13Q86W25 1043 aa26.39■■□□□ 1.82
CHD1L-209ENST00000492728 LARP1Q6PKG0 1096 aaKnown RBP26.37■■□□□ 1.81
CHD1L-209ENST00000492728 COL5A2P05997 1499 aaPredicted RBP26.36■■□□□ 1.81
CHD1L-209ENST00000492728 TONSLQ96HA7 1378 aa26.36■■□□□ 1.81
CHD1L-209ENST00000492728 SBNO2Q9Y2G9 1366 aa26.36■■□□□ 1.81
CHD1L-209ENST00000492728 CPSF1Q10570 1443 aaKnown RBP26.35■■□□□ 1.81
CHD1L-209ENST00000492728 CARD11Q9BXL7 1154 aa26.35■■□□□ 1.81
CHD1L-209ENST00000492728 USP35Q9P2H5 1018 aa26.35■■□□□ 1.81
CHD1L-209ENST00000492728 ZRANB1Q9UGI0 708 aa26.35■■□□□ 1.81
CHD1L-209ENST00000492728 NLRP6P59044 892 aa26.34■■□□□ 1.81
CHD1L-209ENST00000492728 TNS1Q9HBL0 1735 aaKnown RBP26.33■■□□□ 1.81
CHD1L-209ENST00000492728 TTC21BQ7Z4L5 1316 aa26.33■■□□□ 1.81
CHD1L-209ENST00000492728 SF3B2Q13435 895 aaKnown RBP26.32■■□□□ 1.8
CHD1L-209ENST00000492728 RGPD1P0DJD0 1748 aa26.31■■□□□ 1.8
CHD1L-209ENST00000492728 CD163L1Q9NR16 1453 aa26.31■■□□□ 1.8
CHD1L-209ENST00000492728 COL18A1P39060 1754 aa26.31■■□□□ 1.8
CHD1L-209ENST00000492728 EVA1CP58658 441 aa26.31■■□□□ 1.8
CHD1L-209ENST00000492728 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
CHD1L-209ENST00000492728 MON2Q7Z3U7 1717 aa26.31■■□□□ 1.8
CHD1L-209ENST00000492728 ZBTB7CA1YPR0 619 aa26.29■■□□□ 1.8
CHD1L-209ENST00000492728 BARGINQ6ZT62 677 aa26.29■■□□□ 1.8
CHD1L-209ENST00000492728 AATKQ6ZMQ8 1374 aa26.29■■□□□ 1.8
CHD1L-209ENST00000492728 NFAT5O94916 1531 aa26.28■■□□□ 1.8
CHD1L-209ENST00000492728 TCP11L2Q8N4U5 519 aa26.27■■□□□ 1.8
CHD1L-209ENST00000492728 ZNF692Q9BU19 519 aaPredicted RBP26.27■■□□□ 1.8
CHD1L-209ENST00000492728 KTN1Q86UP2 1357 aaKnown RBP26.27■■□□□ 1.8
CHD1L-209ENST00000492728 DISP2A7MBM2 1401 aa26.25■■□□□ 1.79
CHD1L-209ENST00000492728 AXIN2Q9Y2T1 843 aa26.25■■□□□ 1.79
CHD1L-209ENST00000492728 CRB1P82279 1406 aa26.24■■□□□ 1.79
CHD1L-209ENST00000492728 TTC21AQ8NDW8 1320 aa26.24■■□□□ 1.79
CHD1L-209ENST00000492728 BAG6P46379 1132 aa26.24■■□□□ 1.79
CHD1L-209ENST00000492728 PARP4Q9UKK3 1724 aaKnown RBP26.24■■□□□ 1.79
CHD1L-209ENST00000492728 EN1Q05925 392 aaPredicted RBP26.23■■□□□ 1.79
CHD1L-209ENST00000492728 SOX12O15370 315 aa26.22■■□□□ 1.79
CHD1L-209ENST00000492728 USP54Q70EL1 1684 aa26.22■■□□□ 1.79
CHD1L-209ENST00000492728 ARHGEF25Q86VW2 580 aa26.21■■□□□ 1.79
CHD1L-209ENST00000492728 LRRC37A3O60309 1634 aa26.21■■□□□ 1.79
CHD1L-209ENST00000492728 TRIM37O94972 964 aa26.2■■□□□ 1.78
CHD1L-209ENST00000492728 THRAP3Q9Y2W1 955 aaKnown RBP26.2■■□□□ 1.78
CHD1L-209ENST00000492728 FAM196AQ6ZSG2 479 aa26.19■■□□□ 1.78
CHD1L-209ENST00000492728 TESK2Q96S53 571 aa26.19■■□□□ 1.78
CHD1L-209ENST00000492728 SLC12A5Q9H2X9 1139 aa26.19■■□□□ 1.78
CHD1L-209ENST00000492728 RGPD5Q99666 1765 aa26.19■■□□□ 1.78
CHD1L-209ENST00000492728 WNK3Q9BYP7 1800 aa26.18■■□□□ 1.78
CHD1L-209ENST00000492728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms