RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 VPS72Q15906 364 aa14.54□□□□□ -0.08
TNFRSF9-203ENST00000492571 KRT27Q7Z3Y8 459 aa14.54□□□□□ -0.08
TNFRSF9-203ENST00000492571 DEFB132Q7Z7B7 95 aa14.54□□□□□ -0.08
TNFRSF9-203ENST00000492571 CCDC144AA2RUR9 1427 aa14.54□□□□□ -0.08
TNFRSF9-203ENST00000492571 CDC42BPGQ6DT37 1551 aa14.53□□□□□ -0.08
TNFRSF9-203ENST00000492571 RALGAPBQ86X10 1494 aa14.53□□□□□ -0.08
TNFRSF9-203ENST00000492571 ABCC11Q96J66 1382 aa14.53□□□□□ -0.08
TNFRSF9-203ENST00000492571 ANKRD30BQ9BXX2 1392 aa14.53□□□□□ -0.08
TNFRSF9-203ENST00000492571 ADGRF5Q8IZF2 1346 aa14.53□□□□□ -0.08
TNFRSF9-203ENST00000492571 TMEM132EQ6IEE7 984 aa14.53□□□□□ -0.08
TNFRSF9-203ENST00000492571 BAG6P46379 1132 aa14.52□□□□□ -0.09
TNFRSF9-203ENST00000492571 PHF8Q9UPP1 1060 aa14.52□□□□□ -0.09
TNFRSF9-203ENST00000492571 MIER1Q8N108 512 aa14.51□□□□□ -0.09
TNFRSF9-203ENST00000492571 SIRT1Q96EB6 747 aa14.51□□□□□ -0.09
TNFRSF9-203ENST00000492571 SLIT2O94813 1529 aa14.51□□□□□ -0.09
TNFRSF9-203ENST00000492571 RRBP1Q9P2E9 1410 aaKnown RBP14.5□□□□□ -0.09
TNFRSF9-203ENST00000492571 ONECUT3O60422 494 aaPredicted RBP14.5□□□□□ -0.09
TNFRSF9-203ENST00000492571 CABLES1Q8TDN4 633 aa14.5□□□□□ -0.09
TNFRSF9-203ENST00000492571 DCBLD2Q96PD2 775 aa14.5□□□□□ -0.09
TNFRSF9-203ENST00000492571 TECPR2O15040 1411 aa14.49□□□□□ -0.09
TNFRSF9-203ENST00000492571 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
TNFRSF9-203ENST00000492571 LHX8Q68G74 356 aa14.47□□□□□ -0.09
TNFRSF9-203ENST00000492571 POGKQ9P215 609 aa14.47□□□□□ -0.09
TNFRSF9-203ENST00000492571 DHX57Q6P158 1386 aaKnown RBP14.47□□□□□ -0.09
TNFRSF9-203ENST00000492571 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
TNFRSF9-203ENST00000492571 TNS3Q68CZ2 1445 aa14.46□□□□□ -0.09
TNFRSF9-203ENST00000492571 SBNO1A3KN83 1393 aa14.46□□□□□ -0.1
TNFRSF9-203ENST00000492571 PSDA5PKW4 1024 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF9-203ENST00000492571 FAM83GA6ND36 823 aa14.45□□□□□ -0.1
TNFRSF9-203ENST00000492571 FAM98CQ17RN3 349 aaKnown RBP14.45□□□□□ -0.1
TNFRSF9-203ENST00000492571 MPHOSPH9Q99550 1183 aa14.45□□□□□ -0.1
TNFRSF9-203ENST00000492571 TSPYL2Q9H2G4 693 aaPredicted RBP14.45□□□□□ -0.1
TNFRSF9-203ENST00000492571 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
TNFRSF9-203ENST00000492571 SAFB2Q14151 953 aaKnown RBP eCLIP14.44□□□□□ -0.1
TNFRSF9-203ENST00000492571 PMFBP1Q8TBY8 1022 aa14.44□□□□□ -0.1
TNFRSF9-203ENST00000492571 C14orf93Q9H972 538 aaKnown RBP14.44□□□□□ -0.1
TNFRSF9-203ENST00000492571 BTG4Q9NY30 223 aa14.44□□□□□ -0.1
TNFRSF9-203ENST00000492571 ACIN1Q9UKV3 1341 aaKnown RBP14.43□□□□□ -0.1
TNFRSF9-203ENST00000492571 GLI3P10071 1580 aa14.43□□□□□ -0.1
TNFRSF9-203ENST00000492571 PRAM1Q96QH2 718 aa14.43□□□□□ -0.1
TNFRSF9-203ENST00000492571 GPRASP1Q5JY77 1395 aa14.43□□□□□ -0.1
TNFRSF9-203ENST00000492571 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.43□□□□□ -0.1
TNFRSF9-203ENST00000492571 PPLO60437 1756 aa14.42□□□□□ -0.1
TNFRSF9-203ENST00000492571 MARF1Q9Y4F3 1742 aaKnown RBP14.42□□□□□ -0.1
TNFRSF9-203ENST00000492571 HRCP23327 699 aa14.42□□□□□ -0.1
TNFRSF9-203ENST00000492571 KIF1AQ12756 1690 aa14.42□□□□□ -0.1
TNFRSF9-203ENST00000492571 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
TNFRSF9-203ENST00000492571 EN1Q05925 392 aaPredicted RBP14.41□□□□□ -0.1
TNFRSF9-203ENST00000492571 PIK3C2GO75747 1445 aa14.41□□□□□ -0.1
TNFRSF9-203ENST00000492571 SPATA31E1Q6ZUB1 1445 aa14.41□□□□□ -0.1
TNFRSF9-203ENST00000492571 CFAP70Q5T0N1 1121 aa14.4□□□□□ -0.1
TNFRSF9-203ENST00000492571 PLCD3Q8N3E9 789 aa14.4□□□□□ -0.1
TNFRSF9-203ENST00000492571 CCDC61Q9Y6R9 512 aa14.4□□□□□ -0.1
TNFRSF9-203ENST00000492571 NRXN1Q9ULB1 1477 aa14.38□□□□□ -0.11
TNFRSF9-203ENST00000492571 EIF3AQ14152 1382 aaKnown RBP14.38□□□□□ -0.11
TNFRSF9-203ENST00000492571 R3HDM1Q15032 1099 aaKnown RBP14.38□□□□□ -0.11
TNFRSF9-203ENST00000492571 RASEFQ8IZ41 740 aa14.38□□□□□ -0.11
TNFRSF9-203ENST00000492571 NGDNQ8NEJ9 315 aaKnown RBP14.38□□□□□ -0.11
TNFRSF9-203ENST00000492571 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
TNFRSF9-203ENST00000492571 PRDM11Q9NQV5 511 aa14.37□□□□□ -0.11
TNFRSF9-203ENST00000492571 FMN2Q9NZ56 1722 aa14.36□□□□□ -0.11
TNFRSF9-203ENST00000492571 ANKARQ7Z5J8 1434 aa14.36□□□□□ -0.11
TNFRSF9-203ENST00000492571 FAM196AQ6ZSG2 479 aa14.36□□□□□ -0.11
TNFRSF9-203ENST00000492571 FAM182BQ5T319 152 aa14.35□□□□□ -0.11
TNFRSF9-203ENST00000492571 TRAK1Q9UPV9 953 aa14.35□□□□□ -0.11
TNFRSF9-203ENST00000492571 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
TNFRSF9-203ENST00000492571 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
TNFRSF9-203ENST00000492571 EVA1CP58658 441 aa14.34□□□□□ -0.11
TNFRSF9-203ENST00000492571 HIRIP3Q9BW71 556 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF9-203ENST00000492571 LRP5O75197 1615 aa14.33□□□□□ -0.11
TNFRSF9-203ENST00000492571 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 NWD2Q9ULI1 1742 aa14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 APBA3O96018 575 aa14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 EZH2Q15910 746 aaKnown RBP14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 NBPF8Q3BBV2 869 aa14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 NBPF14Q5TI25 921 aa14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 MINK1Q8N4C8 1332 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF9-203ENST00000492571 WASLO00401 505 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF9-203ENST00000492571 TRIM37O94972 964 aa14.32□□□□□ -0.12
TNFRSF9-203ENST00000492571 STRN4Q9NRL3 753 aa14.32□□□□□ -0.12
TNFRSF9-203ENST00000492571 BRWD3Q6RI45 1802 aa14.31□□□□□ -0.12
TNFRSF9-203ENST00000492571 PELP1Q8IZL8 1130 aaKnown RBP14.31□□□□□ -0.12
TNFRSF9-203ENST00000492571 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
TNFRSF9-203ENST00000492571 KIF12Q96FN5 646 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 STAC3Q96MF2 364 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 CAMKK2Q96RR4 588 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 USP35Q9P2H5 1018 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 KDM2AQ9Y2K7 1162 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 SPATA31A1Q5TZJ5 1347 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 PARD3Q8TEW0 1356 aa14.29□□□□□ -0.12
TNFRSF9-203ENST00000492571 DISP2A7MBM2 1401 aa14.28□□□□□ -0.12
TNFRSF9-203ENST00000492571 ZC3H6P61129 1189 aaKnown RBP14.28□□□□□ -0.12
TNFRSF9-203ENST00000492571 PPP1R1BQ9UD71 204 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF9-203ENST00000492571 DLC1Q96QB1 1528 aa14.27□□□□□ -0.12
TNFRSF9-203ENST00000492571 YY1P25490 414 aa14.27□□□□□ -0.13
TNFRSF9-203ENST00000492571 NUBP1P53384 320 aa14.27□□□□□ -0.13
TNFRSF9-203ENST00000492571 CHRNA2Q15822 529 aa14.27□□□□□ -0.13
TNFRSF9-203ENST00000492571 DCAF11Q8TEB1 546 aa14.27□□□□□ -0.13
TNFRSF9-203ENST00000492571 IFT172Q9UG01 1749 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms