RNA–Protein interactions for RNA: ENST00000492468.5

PABPC4-216, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 2,257 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-216ENST00000492468 ZBTB40Q9NUA8 1239 aa18.51■□□□□ 0.55
PABPC4-216ENST00000492468 NASPP49321 788 aaPredicted RBP18.5■□□□□ 0.55
PABPC4-216ENST00000492468 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
PABPC4-216ENST00000492468 TSR2Q969E8 191 aaKnown RBP18.5■□□□□ 0.55
PABPC4-216ENST00000492468 TERF1P54274 439 aa18.49■□□□□ 0.55
PABPC4-216ENST00000492468 ABCC11Q96J66 1382 aa18.49■□□□□ 0.55
PABPC4-216ENST00000492468 CD2BP2O95400 341 aaKnown RBP18.49■□□□□ 0.55
PABPC4-216ENST00000492468 EXOSC9Q06265 439 aaKnown RBP18.49■□□□□ 0.55
PABPC4-216ENST00000492468 BMP2KLQ5H9B9 411 aa18.49■□□□□ 0.55
PABPC4-216ENST00000492468 PPRC1Q5VV67 1664 aaKnown RBP18.48■□□□□ 0.55
PABPC4-216ENST00000492468 EFCAB2Q5VUJ9 269 aa18.48■□□□□ 0.55
PABPC4-216ENST00000492468 CD109Q6YHK3 1445 aa18.48■□□□□ 0.55
PABPC4-216ENST00000492468 K7ELQ4 463 aaPredicted RBP18.48■□□□□ 0.55
PABPC4-216ENST00000492468 KLHL40Q2TBA0 621 aa18.48■□□□□ 0.55
PABPC4-216ENST00000492468 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
PABPC4-216ENST00000492468 MROH1Q8NDA8 1641 aa18.47■□□□□ 0.55
PABPC4-216ENST00000492468 TMEM57Q8N5G2 664 aa18.47■□□□□ 0.55
PABPC4-216ENST00000492468 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.47■□□□□ 0.55
PABPC4-216ENST00000492468 SPAG9O60271 1321 aaKnown RBP18.47■□□□□ 0.55
PABPC4-216ENST00000492468 SSFA2P28290 1259 aa18.46■□□□□ 0.55
PABPC4-216ENST00000492468 CHD1LQ86WJ1 897 aa18.46■□□□□ 0.55
PABPC4-216ENST00000492468 NSD2O96028 1365 aa18.46■□□□□ 0.55
PABPC4-216ENST00000492468 REREQ9P2R6 1566 aa18.46■□□□□ 0.55
PABPC4-216ENST00000492468 LNPKQ9C0E8 428 aa18.46■□□□□ 0.54
PABPC4-216ENST00000492468 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.54
PABPC4-216ENST00000492468 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
PABPC4-216ENST00000492468 MED14O60244 1454 aa18.45■□□□□ 0.54
PABPC4-216ENST00000492468 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
PABPC4-216ENST00000492468 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.545e-6■□□□□ 8
PABPC4-216ENST00000492468 GOLGA6L22H0YM25 854 aa18.44■□□□□ 0.54
PABPC4-216ENST00000492468 RIPK4P57078 832 aa18.44■□□□□ 0.54
PABPC4-216ENST00000492468 IL16Q14005 1332 aa18.44■□□□□ 0.54
PABPC4-216ENST00000492468 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
PABPC4-216ENST00000492468 EFCAB6Q5THR3 1501 aa18.43■□□□□ 0.54
PABPC4-216ENST00000492468 ZNF445P59923 1031 aa18.43■□□□□ 0.54
PABPC4-216ENST00000492468 HS1BP3Q53T59 392 aa18.43■□□□□ 0.54
PABPC4-216ENST00000492468 GAS2L2Q8NHY3 880 aa18.43■□□□□ 0.54
PABPC4-216ENST00000492468 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
PABPC4-216ENST00000492468 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
PABPC4-216ENST00000492468 BAG4O95429 457 aaKnown RBP18.43■□□□□ 0.54
PABPC4-216ENST00000492468 MSNP26038 577 aaKnown RBP18.43■□□□□ 0.54
PABPC4-216ENST00000492468 CALD1Q05682 793 aaKnown RBP18.43■□□□□ 0.54
PABPC4-216ENST00000492468 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
PABPC4-216ENST00000492468 COL3A1P02461 1466 aaPredicted RBP18.42■□□□□ 0.54
PABPC4-216ENST00000492468 PLEKHF1Q96S99 279 aa18.42■□□□□ 0.54
PABPC4-216ENST00000492468 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
PABPC4-216ENST00000492468 ARAP3Q8WWN8 1544 aa18.42■□□□□ 0.54
PABPC4-216ENST00000492468 AK9Q5TCS8 1911 aa18.42■□□□□ 0.54
PABPC4-216ENST00000492468 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
PABPC4-216ENST00000492468 ZCCHC11Q5TAX3 1644 aaKnown RBP18.42■□□□□ 0.54
PABPC4-216ENST00000492468 ATP7AQ04656 1500 aa18.41■□□□□ 0.54
PABPC4-216ENST00000492468 PPLO60437 1756 aa18.41■□□□□ 0.54
PABPC4-216ENST00000492468 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
PABPC4-216ENST00000492468 TBC1D9Q6ZT07 1266 aa18.4■□□□□ 0.54
PABPC4-216ENST00000492468 IPO8O15397 1037 aaKnown RBP18.39■□□□□ 0.54
PABPC4-216ENST00000492468 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.54
PABPC4-216ENST00000492468 PPIP5K1Q6PFW1 1433 aa18.39■□□□□ 0.53
PABPC4-216ENST00000492468 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
PABPC4-216ENST00000492468 PDLIM2Q96JY6 352 aa18.39■□□□□ 0.53
PABPC4-216ENST00000492468 FANCAO15360 1455 aa18.38■□□□□ 0.53
PABPC4-216ENST00000492468 ZNF500O60304 480 aaPredicted RBP18.38■□□□□ 0.53
PABPC4-216ENST00000492468 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
PABPC4-216ENST00000492468 NOL7Q9UMY1 257 aaKnown RBP18.38■□□□□ 0.53
PABPC4-216ENST00000492468 TULP4Q9NRJ4 1543 aa18.37■□□□□ 0.53
PABPC4-216ENST00000492468 ALDH1L2Q3SY69 923 aa18.37■□□□□ 0.53
PABPC4-216ENST00000492468 AFAP1Q8N556 730 aa18.37■□□□□ 0.53
PABPC4-216ENST00000492468 GCC1Q96CN9 775 aa18.37■□□□□ 0.53
PABPC4-216ENST00000492468 TRAK1Q9UPV9 953 aa18.37■□□□□ 0.53
PABPC4-216ENST00000492468 CYP2E1P05181 493 aaPredicted RBP18.36■□□□□ 0.53
PABPC4-216ENST00000492468 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.36■□□□□ 0.53
PABPC4-216ENST00000492468 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
PABPC4-216ENST00000492468 CHD1O14646 1710 aa18.35■□□□□ 0.53
PABPC4-216ENST00000492468 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
PABPC4-216ENST00000492468 ZSCAN23Q3MJ62 389 aa18.35■□□□□ 0.53
PABPC4-216ENST00000492468 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
PABPC4-216ENST00000492468 ARHGEF28Q8N1W1 1705 aaKnown RBP18.35■□□□□ 0.53
PABPC4-216ENST00000492468 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
PABPC4-216ENST00000492468 BRPF1P55201 1214 aaPredicted RBP18.34■□□□□ 0.53
PABPC4-216ENST00000492468 ANKRD45Q5TZF3 282 aa18.34■□□□□ 0.53
PABPC4-216ENST00000492468 C14orf93Q9H972 538 aaKnown RBP18.34■□□□□ 0.53
PABPC4-216ENST00000492468 LMBRD1Q9NUN5 540 aa18.34■□□□□ 0.53
PABPC4-216ENST00000492468 PRDM4Q9UKN5 801 aa18.34■□□□□ 0.53
PABPC4-216ENST00000492468 R3HCC1Q9Y3T6 440 aaKnown RBP18.34■□□□□ 0.53
PABPC4-216ENST00000492468 NUCB2P80303 420 aa18.33■□□□□ 0.53
PABPC4-216ENST00000492468 RBM10P98175 930 aaKnown RBP18.33■□□□□ 0.53
PABPC4-216ENST00000492468 LMTK2Q8IWU2 1503 aa18.33■□□□□ 0.52
PABPC4-216ENST00000492468 CDC45O75419 566 aa18.33■□□□□ 0.52
PABPC4-216ENST00000492468 CAVIN1Q6NZI2 390 aaKnown RBP18.33■□□□□ 0.52
PABPC4-216ENST00000492468 RBSNQ9H1K0 784 aa18.33■□□□□ 0.52
PABPC4-216ENST00000492468 GLI2P10070 1586 aa18.32■□□□□ 0.52
PABPC4-216ENST00000492468 PTCH1Q13635 1447 aa18.32■□□□□ 0.52
PABPC4-216ENST00000492468 KIF3BO15066 747 aa18.32■□□□□ 0.52
PABPC4-216ENST00000492468 RABEP1Q15276 862 aa18.32■□□□□ 0.52
PABPC4-216ENST00000492468 ZBTB7BO15156 539 aaPredicted RBP18.32■□□□□ 0.52
PABPC4-216ENST00000492468 MCTP1Q6DN14 999 aa18.32■□□□□ 0.52
PABPC4-216ENST00000492468 U2SURPO15042 1029 aaKnown RBP18.3■□□□□ 0.52
PABPC4-216ENST00000492468 ZKSCAN5Q9Y2L8 839 aa18.3■□□□□ 0.52
PABPC4-216ENST00000492468 ABCA9Q8IUA7 1624 aa18.3■□□□□ 0.52
PABPC4-216ENST00000492468 MCM5P33992 734 aa18.29■□□□□ 0.52
PABPC4-216ENST00000492468 ZNF428Q96B54 188 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms