RNA–Protein interactions for RNA: ENST00000492466.2

SS18L1-205, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-205ENST00000492466 NBPF1Q3BBV0 1214 aa21.14■□□□□ 0.97
SS18L1-205ENST00000492466 NGDNQ8NEJ9 315 aaKnown RBP21.14■□□□□ 0.97
SS18L1-205ENST00000492466 KIAA1210Q9ULL0 1709 aa21.14■□□□□ 0.97
SS18L1-205ENST00000492466 CDK19Q9BWU1 502 aa21.13■□□□□ 0.97
SS18L1-205ENST00000492466 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
SS18L1-205ENST00000492466 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
SS18L1-205ENST00000492466 COL14A1Q05707 1796 aaKnown RBP21.1■□□□□ 0.97
SS18L1-205ENST00000492466 ITSN1Q15811 1721 aa21.1■□□□□ 0.97
SS18L1-205ENST00000492466 PAK3O75914 559 aaPredicted RBP21.1■□□□□ 0.97
SS18L1-205ENST00000492466 CCDC9Q9Y3X0 531 aaKnown RBP21.1■□□□□ 0.97
SS18L1-205ENST00000492466 POLR3AO14802 1390 aaPredicted RBP21.1■□□□□ 0.97
SS18L1-205ENST00000492466 SIN3AQ96ST3 1273 aa21.09■□□□□ 0.97
SS18L1-205ENST00000492466 TOPAZ1Q8N9V7 1692 aa21.09■□□□□ 0.97
SS18L1-205ENST00000492466 KRT27Q7Z3Y8 459 aa21.08■□□□□ 0.97
SS18L1-205ENST00000492466 CCDC61Q9Y6R9 512 aa21.08■□□□□ 0.97
SS18L1-205ENST00000492466 PLEKHG3A1L390 1219 aa21.07■□□□□ 0.96
SS18L1-205ENST00000492466 FAM98CQ17RN3 349 aaKnown RBP21.07■□□□□ 0.96
SS18L1-205ENST00000492466 NBPF8Q3BBV2 869 aa21.07■□□□□ 0.96
SS18L1-205ENST00000492466 DEFB132Q7Z7B7 95 aa21.07■□□□□ 0.96
SS18L1-205ENST00000492466 ZRANB1Q9UGI0 708 aa21.07■□□□□ 0.96
SS18L1-205ENST00000492466 ACEP12821 1306 aa21.06■□□□□ 0.96
SS18L1-205ENST00000492466 SPATA31A5Q5VU36 1347 aa21.05■□□□□ 0.96
SS18L1-205ENST00000492466 SPATA31A7Q8IWB4 1347 aa21.05■□□□□ 0.96
SS18L1-205ENST00000492466 TONSLQ96HA7 1378 aa21.05■□□□□ 0.96
SS18L1-205ENST00000492466 KIAA0232Q92628 1395 aa21.04■□□□□ 0.96
SS18L1-205ENST00000492466 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
SS18L1-205ENST00000492466 PHRF1Q9P1Y6 1649 aaKnown RBP21.03■□□□□ 0.96
SS18L1-205ENST00000492466 NUTM2GQ5VZR2 741 aa21.02■□□□□ 0.96
SS18L1-205ENST00000492466 CHRNA2Q15822 529 aa21.01■□□□□ 0.95
SS18L1-205ENST00000492466 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
SS18L1-205ENST00000492466 THSD7AQ9UPZ6 1657 aa21■□□□□ 0.95
SS18L1-205ENST00000492466 CENPJQ9HC77 1338 aaPredicted RBP21■□□□□ 0.95
SS18L1-205ENST00000492466 TRPM1Q7Z4N2 1603 aa21■□□□□ 0.95
SS18L1-205ENST00000492466 ZC3H6P61129 1189 aaKnown RBP20.99■□□□□ 0.95
SS18L1-205ENST00000492466 SPATA31A1Q5TZJ5 1347 aa20.99■□□□□ 0.95
SS18L1-205ENST00000492466 CABP2Q9NPB3 220 aa20.98■□□□□ 0.95
SS18L1-205ENST00000492466 A0A0G2JS52 829 aa20.97■□□□□ 0.95
SS18L1-205ENST00000492466 MYT1Q01538 1121 aa20.97■□□□□ 0.95
SS18L1-205ENST00000492466 FAM182BQ5T319 152 aa20.97■□□□□ 0.95
SS18L1-205ENST00000492466 USP19O94966 1318 aa20.97■□□□□ 0.95
SS18L1-205ENST00000492466 PPIP5K1Q6PFW1 1433 aa20.96■□□□□ 0.95
SS18L1-205ENST00000492466 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
SS18L1-205ENST00000492466 SF3B2Q13435 895 aaKnown RBP20.96■□□□□ 0.95
SS18L1-205ENST00000492466 ABTB2Q8N961 1025 aa20.96■□□□□ 0.95
SS18L1-205ENST00000492466 NRKQ7Z2Y5 1582 aa20.96■□□□□ 0.95
SS18L1-205ENST00000492466 QRICH2Q9H0J4 1663 aa20.94■□□□□ 0.94
SS18L1-205ENST00000492466 CAMTA1Q9Y6Y1 1673 aa20.94■□□□□ 0.94
SS18L1-205ENST00000492466 CPDO75976 1380 aa20.94■□□□□ 0.94
SS18L1-205ENST00000492466 STRN4Q9NRL3 753 aa20.93■□□□□ 0.94
SS18L1-205ENST00000492466 LMO7Q8WWI1 1683 aa20.93■□□□□ 0.94
SS18L1-205ENST00000492466 CABP1Q9NZU7 370 aa20.92■□□□□ 0.94
SS18L1-205ENST00000492466 SSH2Q76I76 1423 aa20.92■□□□□ 0.94
SS18L1-205ENST00000492466 ROCK2O75116 1388 aaKnown RBP20.91■□□□□ 0.94
SS18L1-205ENST00000492466 GCP02774 474 aa20.91■□□□□ 0.94
SS18L1-205ENST00000492466 BRD4O60885 1362 aaPredicted RBP20.9■□□□□ 0.94
SS18L1-205ENST00000492466 BAG6P46379 1132 aa20.9■□□□□ 0.94
SS18L1-205ENST00000492466 NLRP13Q86W25 1043 aa20.9■□□□□ 0.94
SS18L1-205ENST00000492466 CCER1Q8TC90 406 aaPredicted RBP20.9■□□□□ 0.94
SS18L1-205ENST00000492466 USP6P35125 1406 aa20.89■□□□□ 0.94
SS18L1-205ENST00000492466 EN1Q05925 392 aaPredicted RBP20.89■□□□□ 0.93
SS18L1-205ENST00000492466 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
SS18L1-205ENST00000492466 BARGINQ6ZT62 677 aa20.89■□□□□ 0.93
SS18L1-205ENST00000492466 RGPD1P0DJD0 1748 aa20.88■□□□□ 0.93
SS18L1-205ENST00000492466 DISP2A7MBM2 1401 aa20.87■□□□□ 0.93
SS18L1-205ENST00000492466 TNS1Q9HBL0 1735 aaKnown RBP20.87■□□□□ 0.93
SS18L1-205ENST00000492466 USP35Q9P2H5 1018 aa20.87■□□□□ 0.93
SS18L1-205ENST00000492466 EVA1CP58658 441 aa20.86■□□□□ 0.93
SS18L1-205ENST00000492466 SLIT3O75094 1523 aa20.84■□□□□ 0.93
SS18L1-205ENST00000492466 EVC2Q86UK5 1308 aa20.84■□□□□ 0.93
SS18L1-205ENST00000492466 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
SS18L1-205ENST00000492466 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
SS18L1-205ENST00000492466 FAM196AQ6ZSG2 479 aa20.84■□□□□ 0.93
SS18L1-205ENST00000492466 NLRP6P59044 892 aa20.83■□□□□ 0.93
SS18L1-205ENST00000492466 TCP11L2Q8N4U5 519 aa20.83■□□□□ 0.93
SS18L1-205ENST00000492466 PIK3C2AO00443 1686 aa20.83■□□□□ 0.92
SS18L1-205ENST00000492466 PSDA5PKW4 1024 aaPredicted RBP20.82■□□□□ 0.92
SS18L1-205ENST00000492466 TRIM37O94972 964 aa20.82■□□□□ 0.92
SS18L1-205ENST00000492466 EZH2Q15910 746 aaKnown RBP20.81■□□□□ 0.92
SS18L1-205ENST00000492466 CAMKK2Q96RR4 588 aa20.81■□□□□ 0.92
SS18L1-205ENST00000492466 THRAP3Q9Y2W1 955 aaKnown RBP20.81■□□□□ 0.92
SS18L1-205ENST00000492466 AATKQ6ZMQ8 1374 aa20.81■□□□□ 0.92
SS18L1-205ENST00000492466 COL18A1P39060 1754 aa20.8■□□□□ 0.92
SS18L1-205ENST00000492466 LRP5O75197 1615 aa20.79■□□□□ 0.92
SS18L1-205ENST00000492466 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
SS18L1-205ENST00000492466 CPSF1Q10570 1443 aaKnown RBP20.78■□□□□ 0.92
SS18L1-205ENST00000492466 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
SS18L1-205ENST00000492466 ZNF692Q9BU19 519 aaPredicted RBP20.78■□□□□ 0.92
SS18L1-205ENST00000492466 AXIN2Q9Y2T1 843 aa20.78■□□□□ 0.92
SS18L1-205ENST00000492466 CRB1P82279 1406 aa20.78■□□□□ 0.92
SS18L1-205ENST00000492466 AKAP12Q02952 1782 aa20.77■□□□□ 0.92
SS18L1-205ENST00000492466 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
SS18L1-205ENST00000492466 PARP4Q9UKK3 1724 aaKnown RBP20.77■□□□□ 0.92
SS18L1-205ENST00000492466 SBNO2Q9Y2G9 1366 aa20.75■□□□□ 0.91
SS18L1-205ENST00000492466 APBA3O96018 575 aa20.75■□□□□ 0.91
SS18L1-205ENST00000492466 R3HDM1Q15032 1099 aaKnown RBP20.75■□□□□ 0.91
SS18L1-205ENST00000492466 ARHGEF25Q86VW2 580 aa20.75■□□□□ 0.91
SS18L1-205ENST00000492466 ZBTB7CA1YPR0 619 aa20.73■□□□□ 0.91
SS18L1-205ENST00000492466 PARD3Q8TEW0 1356 aa20.72■□□□□ 0.91
SS18L1-205ENST00000492466 PEAK1Q9H792 1746 aa20.72■□□□□ 0.91
SS18L1-205ENST00000492466 TTC21AQ8NDW8 1320 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms