RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 ZCCHC11Q5TAX3 1644 aaKnown RBP19.01■□□□□ 0.63
TNFRSF1B-203ENST00000492361 SULT6B1Q6IMI4 303 aa19.01■□□□□ 0.63
TNFRSF1B-203ENST00000492361 E9PCH4 1651 aa19.01■□□□□ 0.63
TNFRSF1B-203ENST00000492361 UNC13BO14795 1591 aa19■□□□□ 0.63
TNFRSF1B-203ENST00000492361 SMARCA5O60264 1052 aaPredicted RBP19■□□□□ 0.63
TNFRSF1B-203ENST00000492361 NAP1L5Q96NT1 182 aaPredicted RBP19■□□□□ 0.63
TNFRSF1B-203ENST00000492361 PANK2Q9BZ23 570 aa19■□□□□ 0.63
TNFRSF1B-203ENST00000492361 CHD1LQ86WJ1 897 aa18.99■□□□□ 0.63
TNFRSF1B-203ENST00000492361 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
TNFRSF1B-203ENST00000492361 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
TNFRSF1B-203ENST00000492361 SLC26A8Q96RN1 970 aa18.99■□□□□ 0.63
TNFRSF1B-203ENST00000492361 C16orf71Q8IYS4 520 aaPredicted RBP18.98■□□□□ 0.63
TNFRSF1B-203ENST00000492361 POLKQ9UBT6 870 aa18.98■□□□□ 0.63
TNFRSF1B-203ENST00000492361 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
TNFRSF1B-203ENST00000492361 KIF16BQ96L93 1317 aa18.98■□□□□ 0.63
TNFRSF1B-203ENST00000492361 TRAK2O60296 914 aa18.98■□□□□ 0.63
TNFRSF1B-203ENST00000492361 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
TNFRSF1B-203ENST00000492361 MADDQ8WXG6 1647 aa18.97■□□□□ 0.63
TNFRSF1B-203ENST00000492361 TRPM2O94759 1503 aa18.97■□□□□ 0.63
TNFRSF1B-203ENST00000492361 RBM33Q96EV2 1170 aaKnown RBP18.97■□□□□ 0.63
TNFRSF1B-203ENST00000492361 NPC1L1Q9UHC9 1359 aa18.97■□□□□ 0.63
TNFRSF1B-203ENST00000492361 ANKRD36BQ8N2N9 1353 aa18.97■□□□□ 0.63
TNFRSF1B-203ENST00000492361 CHMP5Q9NZZ3 219 aa18.96■□□□□ 0.63
TNFRSF1B-203ENST00000492361 ZFYVE16Q7Z3T8 1539 aa18.96■□□□□ 0.63
TNFRSF1B-203ENST00000492361 MCM4P33991 863 aa18.96■□□□□ 0.63
TNFRSF1B-203ENST00000492361 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
TNFRSF1B-203ENST00000492361 SLC52A1Q9NWF4 448 aa18.96■□□□□ 0.63
TNFRSF1B-203ENST00000492361 MBIPQ9NS73 344 aa18.95■□□□□ 0.62
TNFRSF1B-203ENST00000492361 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
TNFRSF1B-203ENST00000492361 F6X3S4 739 aa18.94■□□□□ 0.62
TNFRSF1B-203ENST00000492361 FCHSD2O94868 740 aa18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 NFE2L2Q16236 605 aa18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 TRIM44Q96DX7 344 aaPredicted RBP18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 GNAI1P63096 354 aa18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 RTF1Q92541 710 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 NUDT16Q96DE0 195 aaKnown RBP18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 ZBTB40Q9NUA8 1239 aa18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 SYNMO15061 1565 aa18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 PLXNC1O60486 1568 aa18.92■□□□□ 0.62
TNFRSF1B-203ENST00000492361 KDM5AP29375 1690 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1B-203ENST00000492361 NGDNQ8NEJ9 315 aaKnown RBP18.91■□□□□ 0.62
TNFRSF1B-203ENST00000492361 PLEKHF1Q96S99 279 aa18.91■□□□□ 0.62
TNFRSF1B-203ENST00000492361 L1TD1Q5T7N2 865 aaKnown RBP18.9■□□□□ 0.62
TNFRSF1B-203ENST00000492361 OTUD7AQ8TE49 926 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1B-203ENST00000492361 CEBPAP49715 358 aaPredicted RBP18.9■□□□□ 0.62
TNFRSF1B-203ENST00000492361 TRIM6-TRIM34B2RNG4 842 aa18.89■□□□□ 0.61
TNFRSF1B-203ENST00000492361 AMPHP49418 695 aa18.89■□□□□ 0.61
TNFRSF1B-203ENST00000492361 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
TNFRSF1B-203ENST00000492361 ZNF518AQ6AHZ1 1483 aa18.89■□□□□ 0.61
TNFRSF1B-203ENST00000492361 SLC4A2P04920 1241 aa18.89■□□□□ 0.61
TNFRSF1B-203ENST00000492361 RILPL2Q969X0 211 aa18.89■□□□□ 0.61
TNFRSF1B-203ENST00000492361 FOXO3O43524 673 aa18.88■□□□□ 0.61
TNFRSF1B-203ENST00000492361 VAMP4O75379 141 aa18.88■□□□□ 0.61
TNFRSF1B-203ENST00000492361 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
TNFRSF1B-203ENST00000492361 DTNBO60941 627 aa18.87■□□□□ 0.61
TNFRSF1B-203ENST00000492361 TBC1D9Q6ZT07 1266 aa18.87■□□□□ 0.61
TNFRSF1B-203ENST00000492361 NINLQ9Y2I6 1382 aa18.87■□□□□ 0.61
TNFRSF1B-203ENST00000492361 CALD1Q05682 793 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1B-203ENST00000492361 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
TNFRSF1B-203ENST00000492361 YEATS2Q9ULM3 1422 aa18.86■□□□□ 0.61
TNFRSF1B-203ENST00000492361 EIF2S2P20042 333 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1B-203ENST00000492361 DDX49Q9Y6V7 483 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1B-203ENST00000492361 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 CD2BP2O95400 341 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 NUCB1Q02818 461 aa18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 EXOC6BQ9Y2D4 811 aa18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 SPHKAPQ2M3C7 1700 aa18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 GOLGA6L22H0YM25 854 aa18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 TSPYL4Q9UJ04 414 aa18.85■□□□□ 0.61
TNFRSF1B-203ENST00000492361 SSFA2P28290 1259 aa18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 MCTP1Q6DN14 999 aa18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 CHAMP1Q96JM3 812 aa18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 ARID3AQ99856 593 aa18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 XRCC6P12956 609 aaKnown RBP eCLIP18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 HDAC1Q13547 482 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 TNPO1Q92973 898 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 GBP4Q96PP9 640 aa18.84■□□□□ 0.61
TNFRSF1B-203ENST00000492361 SMC5Q8IY18 1101 aa18.83■□□□□ 0.61
TNFRSF1B-203ENST00000492361 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.83■□□□□ 0.61
TNFRSF1B-203ENST00000492361 MAP4K4O95819 1239 aaPredicted RBP18.83■□□□□ 0.61
TNFRSF1B-203ENST00000492361 WASLO00401 505 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1B-203ENST00000492361 MRPL50Q8N5N7 158 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1B-203ENST00000492361 ANP32BQ92688 251 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1B-203ENST00000492361 FKBP5Q13451 457 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 API5Q9BZZ5 524 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 CCDC61Q9Y6R9 512 aa18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 ZBTB7BO15156 539 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 MPNDQ8N594 471 aa18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 MEIS3Q99687 375 aa18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 PHF23Q9BUL5 403 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1B-203ENST00000492361 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
TNFRSF1B-203ENST00000492361 CASC1Q6TDU7 716 aa18.81■□□□□ 0.6
TNFRSF1B-203ENST00000492361 USHBP1Q8N6Y0 703 aa18.81■□□□□ 0.6
TNFRSF1B-203ENST00000492361 AAMPQ13685 434 aa18.81■□□□□ 0.6
TNFRSF1B-203ENST00000492361 ANTXR1Q9H6X2 564 aa18.8■□□□□ 0.6
TNFRSF1B-203ENST00000492361 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
TNFRSF1B-203ENST00000492361 LARP6Q9BRS8 491 aaKnown RBP18.8■□□□□ 0.6
TNFRSF1B-203ENST00000492361 CT47B1P0C2W7 299 aaPredicted RBP18.79■□□□□ 0.6
TNFRSF1B-203ENST00000492361 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
TNFRSF1B-203ENST00000492361 CDC45O75419 566 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms