RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 AFF2P51816 1311 aa24.99■■□□□ 1.59
LMNB1-206ENST00000492190 PLEKHG5O94827 1062 aa24.98■■□□□ 1.59
LMNB1-206ENST00000492190 MON2Q7Z3U7 1717 aa24.97■■□□□ 1.59
LMNB1-206ENST00000492190 USP6P35125 1406 aa24.96■■□□□ 1.59
LMNB1-206ENST00000492190 PHRF1Q9P1Y6 1649 aaKnown RBP24.96■■□□□ 1.59
LMNB1-206ENST00000492190 SSH2Q76I76 1423 aa24.95■■□□□ 1.59
LMNB1-206ENST00000492190 NRKQ7Z2Y5 1582 aa24.95■■□□□ 1.58
LMNB1-206ENST00000492190 CD163L1Q9NR16 1453 aa24.95■■□□□ 1.58
LMNB1-206ENST00000492190 CPSF1Q10570 1443 aaKnown RBP24.95■■□□□ 1.58
LMNB1-206ENST00000492190 NGLY1Q96IV0 654 aa24.94■■□□□ 1.58
LMNB1-206ENST00000492190 PUS7Q96PZ0 661 aaKnown RBP24.93■■□□□ 1.58
LMNB1-206ENST00000492190 PIK3C2AO00443 1686 aa24.93■■□□□ 1.58
LMNB1-206ENST00000492190 PLCH1Q4KWH8 1693 aa24.92■■□□□ 1.58
LMNB1-206ENST00000492190 NUTM2GQ5VZR2 741 aa24.92■■□□□ 1.58
LMNB1-206ENST00000492190 ZNF772Q68DY9 489 aaPredicted RBP24.92■■□□□ 1.58
LMNB1-206ENST00000492190 FNBP4Q8N3X1 1017 aaPredicted RBP24.91■■□□□ 1.58
LMNB1-206ENST00000492190 SLC12A5Q9H2X9 1139 aa24.91■■□□□ 1.58
LMNB1-206ENST00000492190 BRD4O60885 1362 aaPredicted RBP24.91■■□□□ 1.58
LMNB1-206ENST00000492190 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.89■■□□□ 1.57
LMNB1-206ENST00000492190 BCL9LQ86UU0 1499 aa24.89■■□□□ 1.57
LMNB1-206ENST00000492190 SLIT2O94813 1529 aa24.88■■□□□ 1.57
LMNB1-206ENST00000492190 HAP1P54257 671 aaPredicted RBP24.88■■□□□ 1.57
LMNB1-206ENST00000492190 ABTB2Q8N961 1025 aa24.88■■□□□ 1.57
LMNB1-206ENST00000492190 TMC1Q8TDI8 760 aa24.88■■□□□ 1.57
LMNB1-206ENST00000492190 NWD2Q9ULI1 1742 aa24.87■■□□□ 1.57
LMNB1-206ENST00000492190 SLC24A1O60721 1099 aa24.87■■□□□ 1.57
LMNB1-206ENST00000492190 TMF1P82094 1093 aa24.87■■□□□ 1.57
LMNB1-206ENST00000492190 ZNF692Q9BU19 519 aaPredicted RBP24.87■■□□□ 1.57
LMNB1-206ENST00000492190 KTN1Q86UP2 1357 aaKnown RBP24.87■■□□□ 1.57
LMNB1-206ENST00000492190 TTC21BQ7Z4L5 1316 aa24.86■■□□□ 1.57
LMNB1-206ENST00000492190 MYOM1P52179 1685 aa24.85■■□□□ 1.57
LMNB1-206ENST00000492190 HSPA5P11021 654 aaKnown RBP24.85■■□□□ 1.57
LMNB1-206ENST00000492190 USP21Q9UK80 565 aa24.85■■□□□ 1.57
LMNB1-206ENST00000492190 COL14A1Q05707 1796 aaKnown RBP24.85■■□□□ 1.57
LMNB1-206ENST00000492190 USP19O94966 1318 aa24.85■■□□□ 1.57
LMNB1-206ENST00000492190 FAM83GA6ND36 823 aa24.84■■□□□ 1.57
LMNB1-206ENST00000492190 QTRT2Q9H974 415 aaKnown RBP24.84■■□□□ 1.57
LMNB1-206ENST00000492190 NRAPQ86VF7 1730 aa24.83■■□□□ 1.57
LMNB1-206ENST00000492190 A0A1W2PP64 1363 aa24.83■■□□□ 1.57
LMNB1-206ENST00000492190 EIF4G2P78344 907 aaKnown RBP eCLIP24.83■■□□□ 1.575e-6■■□□□ 14.3
LMNB1-206ENST00000492190 ATRNO75882 1429 aa24.82■■□□□ 1.56
LMNB1-206ENST00000492190 SLIT3O75094 1523 aa24.81■■□□□ 1.56
LMNB1-206ENST00000492190 NINLQ9Y2I6 1382 aa24.8■■□□□ 1.56
LMNB1-206ENST00000492190 NLRP13Q86W25 1043 aa24.8■■□□□ 1.56
LMNB1-206ENST00000492190 USP54Q70EL1 1684 aa24.8■■□□□ 1.56
LMNB1-206ENST00000492190 NLRP6P59044 892 aa24.79■■□□□ 1.56
LMNB1-206ENST00000492190 TTC21AQ8NDW8 1320 aa24.79■■□□□ 1.56
LMNB1-206ENST00000492190 KIAA0232Q92628 1395 aa24.79■■□□□ 1.56
LMNB1-206ENST00000492190 HDGFL2Q7Z4V5 671 aaPredicted RBP24.78■■□□□ 1.56
LMNB1-206ENST00000492190 TERF2IPQ9NYB0 399 aa24.78■■□□□ 1.56
LMNB1-206ENST00000492190 EDC4Q6P2E9 1401 aaKnown RBP24.78■■□□□ 1.56
LMNB1-206ENST00000492190 RXRBP28702 533 aa24.77■■□□□ 1.56
LMNB1-206ENST00000492190 ZC3H6P61129 1189 aaKnown RBP24.77■■□□□ 1.56
LMNB1-206ENST00000492190 UNC5CLQ8IV45 518 aa24.77■■□□□ 1.56
LMNB1-206ENST00000492190 ZRANB1Q9UGI0 708 aa24.77■■□□□ 1.56
LMNB1-206ENST00000492190 TRPC5Q9UL62 973 aaPredicted RBP24.77■■□□□ 1.56
LMNB1-206ENST00000492190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.76■■□□□ 1.55
LMNB1-206ENST00000492190 GLI3P10071 1580 aa24.76■■□□□ 1.55
LMNB1-206ENST00000492190 GCP02774 474 aa24.75■■□□□ 1.55
LMNB1-206ENST00000492190 RBM6P78332 1123 aaKnown RBP24.75■■□□□ 1.55
LMNB1-206ENST00000492190 CDCA8Q53HL2 280 aa24.75■■□□□ 1.55
LMNB1-206ENST00000492190 LMO7Q8WWI1 1683 aa24.75■■□□□ 1.55
LMNB1-206ENST00000492190 SOCS7O14512 581 aa24.74■■□□□ 1.55
LMNB1-206ENST00000492190 CHRNA2Q15822 529 aa24.74■■□□□ 1.55
LMNB1-206ENST00000492190 NME9Q86XW9 330 aa24.74■■□□□ 1.55
LMNB1-206ENST00000492190 PRDM11Q9NQV5 511 aa24.74■■□□□ 1.55
LMNB1-206ENST00000492190 ANKRD36BQ8N2N9 1353 aa24.74■■□□□ 1.55
LMNB1-206ENST00000492190 COL18A1P39060 1754 aa24.73■■□□□ 1.55
LMNB1-206ENST00000492190 CDK12Q9NYV4 1490 aaPredicted RBP24.73■■□□□ 1.55
LMNB1-206ENST00000492190 CPDO75976 1380 aa24.73■■□□□ 1.55
LMNB1-206ENST00000492190 BTG4Q9NY30 223 aa24.73■■□□□ 1.55
LMNB1-206ENST00000492190 USP31Q70CQ4 1352 aa24.72■■□□□ 1.55
LMNB1-206ENST00000492190 RGPD5Q99666 1765 aa24.72■■□□□ 1.55
LMNB1-206ENST00000492190 NFAT5O94916 1531 aa24.71■■□□□ 1.55
LMNB1-206ENST00000492190 RGS12O14924 1447 aa24.71■■□□□ 1.55
LMNB1-206ENST00000492190 C11orf95C9JLR9 678 aaPredicted RBP24.71■■□□□ 1.55
LMNB1-206ENST00000492190 CAMTA1Q9Y6Y1 1673 aa24.7■■□□□ 1.54
LMNB1-206ENST00000492190 GJD4Q96KN9 370 aaPredicted RBP24.69■■□□□ 1.54
LMNB1-206ENST00000492190 KIF20BQ96Q89 1820 aa24.68■■□□□ 1.54
LMNB1-206ENST00000492190 VPS72Q15906 364 aa24.68■■□□□ 1.54
LMNB1-206ENST00000492190 LTN1O94822 1766 aa24.67■■□□□ 1.54
LMNB1-206ENST00000492190 BRWD3Q6RI45 1802 aa24.67■■□□□ 1.54
LMNB1-206ENST00000492190 OVOS2A0A0J9YW53 1432 aa24.67■■□□□ 1.54
LMNB1-206ENST00000492190 OVOS2Q6IE36 1432 aa24.67■■□□□ 1.54
LMNB1-206ENST00000492190 SOX12O15370 315 aa24.65■■□□□ 1.54
LMNB1-206ENST00000492190 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
LMNB1-206ENST00000492190 CARD14Q9BXL6 1004 aa24.65■■□□□ 1.54
LMNB1-206ENST00000492190 ARHGEF25Q86VW2 580 aa24.63■■□□□ 1.53
LMNB1-206ENST00000492190 ZBTB7CA1YPR0 619 aa24.62■■□□□ 1.53
LMNB1-206ENST00000492190 KCNH5Q8NCM2 988 aa24.62■■□□□ 1.53
LMNB1-206ENST00000492190 AATKQ6ZMQ8 1374 aa24.62■■□□□ 1.53
LMNB1-206ENST00000492190 EP400Q96L91 3159 aa24.61■■□□□ 1.53
LMNB1-206ENST00000492190 CCDC9Q9Y3X0 531 aaKnown RBP24.6■■□□□ 1.53
LMNB1-206ENST00000492190 NSD3Q9BZ95 1437 aa24.6■■□□□ 1.53
LMNB1-206ENST00000492190 SPATA31A5Q5VU36 1347 aa24.6■■□□□ 1.53
LMNB1-206ENST00000492190 SPATA31A7Q8IWB4 1347 aa24.6■■□□□ 1.53
LMNB1-206ENST00000492190 COL5A2P05997 1499 aaPredicted RBP24.59■■□□□ 1.53
LMNB1-206ENST00000492190 FYB1O15117 783 aa24.59■■□□□ 1.53
LMNB1-206ENST00000492190 STRN4Q9NRL3 753 aa24.59■■□□□ 1.53
LMNB1-206ENST00000492190 AXIN2Q9Y2T1 843 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms