RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 CABP2Q9NPB3 220 aa38.69■■■■□ 3.78
SH3GL3-204ENST00000492099 ABCA3Q99758 1704 aa38.66■■■■□ 3.78
SH3GL3-204ENST00000492099 EVC2Q86UK5 1308 aa38.65■■■■□ 3.78
SH3GL3-204ENST00000492099 GJD4Q96KN9 370 aaPredicted RBP38.64■■■■□ 3.78
SH3GL3-204ENST00000492099 PPIP5K1Q6PFW1 1433 aa38.63■■■■□ 3.78
SH3GL3-204ENST00000492099 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.63■■■■□ 3.77
SH3GL3-204ENST00000492099 UPF1Q92900 1129 aaKnown RBP eCLIP38.61■■■■□ 3.77
SH3GL3-204ENST00000492099 FAM83GA6ND36 823 aa38.6■■■■□ 3.77
SH3GL3-204ENST00000492099 CARD11Q9BXL7 1154 aa38.6■■■■□ 3.77
SH3GL3-204ENST00000492099 CABP1Q9NZU7 370 aa38.56■■■■□ 3.76
SH3GL3-204ENST00000492099 RALGAPBQ86X10 1494 aa38.55■■■■□ 3.76
SH3GL3-204ENST00000492099 VPS72Q15906 364 aa38.54■■■■□ 3.76
SH3GL3-204ENST00000492099 NWD2Q9ULI1 1742 aa38.54■■■■□ 3.76
SH3GL3-204ENST00000492099 BRD4O60885 1362 aaPredicted RBP38.53■■■■□ 3.76
SH3GL3-204ENST00000492099 PLCH1Q4KWH8 1693 aa38.52■■■■□ 3.76
SH3GL3-204ENST00000492099 ABTB2Q8N961 1025 aa38.51■■■■□ 3.76
SH3GL3-204ENST00000492099 SBNO2Q9Y2G9 1366 aa38.49■■■■□ 3.75
SH3GL3-204ENST00000492099 NUTM2GQ5VZR2 741 aa38.49■■■■□ 3.75
SH3GL3-204ENST00000492099 CRYBG1Q9Y4K1 1723 aa38.49■■■■□ 3.75
SH3GL3-204ENST00000492099 BTG4Q9NY30 223 aa38.48■■■■□ 3.75
SH3GL3-204ENST00000492099 PRDM11Q9NQV5 511 aa38.47■■■■□ 3.75
SH3GL3-204ENST00000492099 ATAD2Q6PL18 1390 aa38.46■■■■□ 3.75
SH3GL3-204ENST00000492099 GLI3P10071 1580 aa38.46■■■■□ 3.75
SH3GL3-204ENST00000492099 CCDC9Q9Y3X0 531 aaKnown RBP38.46■■■■□ 3.75
SH3GL3-204ENST00000492099 COL14A1Q05707 1796 aaKnown RBP38.46■■■■□ 3.75
SH3GL3-204ENST00000492099 NLRP13Q86W25 1043 aa38.43■■■■□ 3.74
SH3GL3-204ENST00000492099 USP6P35125 1406 aa38.43■■■■□ 3.74
SH3GL3-204ENST00000492099 ZNF692Q9BU19 519 aaPredicted RBP38.41■■■■□ 3.74
SH3GL3-204ENST00000492099 KIAA0232Q92628 1395 aa38.41■■■■□ 3.74
SH3GL3-204ENST00000492099 PHRF1Q9P1Y6 1649 aaKnown RBP38.39■■■■□ 3.74
SH3GL3-204ENST00000492099 ZC3H6P61129 1189 aaKnown RBP38.39■■■■□ 3.74
SH3GL3-204ENST00000492099 USP19O94966 1318 aa38.38■■■■□ 3.74
SH3GL3-204ENST00000492099 ONECUT3O60422 494 aaPredicted RBP38.37■■■■□ 3.73
SH3GL3-204ENST00000492099 NRAPQ86VF7 1730 aa38.36■■■■□ 3.73
SH3GL3-204ENST00000492099 PCGF6Q9BYE7 350 aa38.36■■■■□ 3.73
SH3GL3-204ENST00000492099 CLSPNQ9HAW4 1339 aa38.36■■■■□ 3.73
SH3GL3-204ENST00000492099 CHRNA2Q15822 529 aa38.34■■■■□ 3.73
SH3GL3-204ENST00000492099 SEPT12Q8IYM1 358 aa38.34■■■■□ 3.73
SH3GL3-204ENST00000492099 SSH2Q76I76 1423 aa38.34■■■■□ 3.73
SH3GL3-204ENST00000492099 GCP02774 474 aa38.32■■■■□ 3.72
SH3GL3-204ENST00000492099 NLRP6P59044 892 aa38.32■■■■□ 3.72
SH3GL3-204ENST00000492099 TIMELESSQ9UNS1 1208 aa38.31■■■■□ 3.72
SH3GL3-204ENST00000492099 CPDO75976 1380 aa38.31■■■■□ 3.72
SH3GL3-204ENST00000492099 NRKQ7Z2Y5 1582 aa38.3■■■■□ 3.72
SH3GL3-204ENST00000492099 CPSF1Q10570 1443 aaKnown RBP38.29■■■■□ 3.72
SH3GL3-204ENST00000492099 SLC24A1O60721 1099 aa38.28■■■■□ 3.72
SH3GL3-204ENST00000492099 SPATA31A5Q5VU36 1347 aa38.28■■■■□ 3.72
SH3GL3-204ENST00000492099 SPATA31A7Q8IWB4 1347 aa38.28■■■■□ 3.72
SH3GL3-204ENST00000492099 PUS7Q96PZ0 661 aaKnown RBP38.27■■■■□ 3.72
SH3GL3-204ENST00000492099 TTC21BQ7Z4L5 1316 aa38.27■■■■□ 3.72
SH3GL3-204ENST00000492099 ST20-MTHFSA0A0A6YYL1 179 aa38.25■■■■□ 3.71
SH3GL3-204ENST00000492099 FAM98CQ17RN3 349 aaKnown RBP38.25■■■■□ 3.71
SH3GL3-204ENST00000492099 TTC21AQ8NDW8 1320 aa38.25■■■■□ 3.71
SH3GL3-204ENST00000492099 KTN1Q86UP2 1357 aaKnown RBP38.24■■■■□ 3.71
SH3GL3-204ENST00000492099 CCDC125Q86Z20 511 aa38.24■■■■□ 3.71
SH3GL3-204ENST00000492099 A0A0G2JS52 829 aa38.23■■■■□ 3.71
SH3GL3-204ENST00000492099 MYT1Q01538 1121 aa38.23■■■■□ 3.71
SH3GL3-204ENST00000492099 STRN4Q9NRL3 753 aa38.23■■■■□ 3.71
SH3GL3-204ENST00000492099 AKAP12Q02952 1782 aa38.23■■■■□ 3.71
SH3GL3-204ENST00000492099 EVA1CP58658 441 aa38.22■■■■□ 3.71
SH3GL3-204ENST00000492099 TMC1Q8TDI8 760 aa38.21■■■■□ 3.71
SH3GL3-204ENST00000492099 TESK2Q96S53 571 aa38.21■■■■□ 3.71
SH3GL3-204ENST00000492099 KRT27Q7Z3Y8 459 aa38.2■■■■□ 3.71
SH3GL3-204ENST00000492099 PIK3C2AO00443 1686 aa38.19■■■■□ 3.7
SH3GL3-204ENST00000492099 SLIT3O75094 1523 aa38.18■■■■□ 3.7
SH3GL3-204ENST00000492099 SPATA31A1Q5TZJ5 1347 aa38.18■■■■□ 3.7
SH3GL3-204ENST00000492099 BRWD3Q6RI45 1802 aa38.18■■■■□ 3.7
SH3GL3-204ENST00000492099 HDGFL2Q7Z4V5 671 aaPredicted RBP38.16■■■■□ 3.7
SH3GL3-204ENST00000492099 SLC12A5Q9H2X9 1139 aa38.16■■■■□ 3.7
SH3GL3-204ENST00000492099 CAMTA1Q9Y6Y1 1673 aa38.16■■■■□ 3.7
SH3GL3-204ENST00000492099 KCNH5Q8NCM2 988 aa38.15■■■■□ 3.7
SH3GL3-204ENST00000492099 EP400Q96L91 3159 aa38.15■■■■□ 3.7
SH3GL3-204ENST00000492099 LMO7Q8WWI1 1683 aa38.14■■■■□ 3.7
SH3GL3-204ENST00000492099 TERF2IPQ9NYB0 399 aa38.13■■■■□ 3.69
SH3GL3-204ENST00000492099 CD163L1Q9NR16 1453 aa38.12■■■■□ 3.69
SH3GL3-204ENST00000492099 USP47Q96K76 1375 aa38.12■■■■□ 3.69
SH3GL3-204ENST00000492099 AATKQ6ZMQ8 1374 aa38.11■■■■□ 3.69
SH3GL3-204ENST00000492099 MON2Q7Z3U7 1717 aa38.11■■■■□ 3.69
SH3GL3-204ENST00000492099 ZBTB7CA1YPR0 619 aa38.1■■■■□ 3.69
SH3GL3-204ENST00000492099 NINLQ9Y2I6 1382 aa38.09■■■■□ 3.69
SH3GL3-204ENST00000492099 LARP1Q6PKG0 1096 aaKnown RBP38.09■■■■□ 3.69
SH3GL3-204ENST00000492099 SUGP2Q8IX01 1082 aaKnown RBP eCLIP38.09■■■■□ 3.69
SH3GL3-204ENST00000492099 BLMP54132 1417 aaPredicted RBP38.09■■■■□ 3.69
SH3GL3-204ENST00000492099 USP35Q9P2H5 1018 aa38.07■■■■□ 3.68
SH3GL3-204ENST00000492099 BARGINQ6ZT62 677 aa38.06■■■■□ 3.68
SH3GL3-204ENST00000492099 CCER1Q8TC90 406 aaPredicted RBP38.06■■■■□ 3.68
SH3GL3-204ENST00000492099 THSD7AQ9UPZ6 1657 aa38.05■■■■□ 3.68
SH3GL3-204ENST00000492099 COL5A2P05997 1499 aaPredicted RBP38.05■■■■□ 3.68
SH3GL3-204ENST00000492099 TMF1P82094 1093 aa38.05■■■■□ 3.68
SH3GL3-204ENST00000492099 USP31Q70CQ4 1352 aa38.05■■■■□ 3.68
SH3GL3-204ENST00000492099 EDC4Q6P2E9 1401 aaKnown RBP38.04■■■■□ 3.68
SH3GL3-204ENST00000492099 ARHGEF25Q86VW2 580 aa38.04■■■■□ 3.68
SH3GL3-204ENST00000492099 TCP11L2Q8N4U5 519 aa38.04■■■■□ 3.68
SH3GL3-204ENST00000492099 THRAP3Q9Y2W1 955 aaKnown RBP38.03■■■■□ 3.68
SH3GL3-204ENST00000492099 A0A1W2PP64 1363 aa38.03■■■■□ 3.68
SH3GL3-204ENST00000492099 SF3B2Q13435 895 aaKnown RBP38.02■■■■□ 3.68
SH3GL3-204ENST00000492099 SOX12O15370 315 aa38.01■■■■□ 3.68
SH3GL3-204ENST00000492099 NME9Q86XW9 330 aa38■■■■□ 3.67
SH3GL3-204ENST00000492099 ZRANB1Q9UGI0 708 aa37.99■■■■□ 3.67
SH3GL3-204ENST00000492099 CRB1P82279 1406 aa37.97■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms