RNA–Protein interactions for RNA: ENST00000492058.1

NCKAP1-206, Transcript of NCK associated protein 1, humanhuman

TSL 5

Gene NCKAP1, Length 642 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-206ENST00000492058 ST18O60284 1047 aa14.09□□□□□ -0.15
NCKAP1-206ENST00000492058 ITGAEP38570 1179 aa14.09□□□□□ -0.15
NCKAP1-206ENST00000492058 KLHL34Q8N239 644 aa14.09□□□□□ -0.15
NCKAP1-206ENST00000492058 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.15
NCKAP1-206ENST00000492058 C1orf167Q5SNV9 1468 aa14.08□□□□□ -0.16
NCKAP1-206ENST00000492058 SNPHO15079 494 aa14.08□□□□□ -0.16
NCKAP1-206ENST00000492058 XPCQ01831 940 aaPredicted RBP14.08□□□□□ -0.16
NCKAP1-206ENST00000492058 SOS2Q07890 1332 aaPredicted RBP14.08□□□□□ -0.16
NCKAP1-206ENST00000492058 UNC13BO14795 1591 aa14.08□□□□□ -0.16
NCKAP1-206ENST00000492058 GSE1Q14687 1217 aa14.07□□□□□ -0.16
NCKAP1-206ENST00000492058 DEFB132Q7Z7B7 95 aa14.07□□□□□ -0.16
NCKAP1-206ENST00000492058 GJD4Q96KN9 370 aaPredicted RBP14.07□□□□□ -0.16
NCKAP1-206ENST00000492058 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.07□□□□□ -0.16
NCKAP1-206ENST00000492058 PCDHB8Q9UN66 801 aa14.07□□□□□ -0.16
NCKAP1-206ENST00000492058 ATRNO75882 1429 aa14.07□□□□□ -0.16
NCKAP1-206ENST00000492058 ESCO1Q5FWF5 840 aa14.06□□□□□ -0.16
NCKAP1-206ENST00000492058 E9PCH4 1651 aa14.06□□□□□ -0.16
NCKAP1-206ENST00000492058 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
NCKAP1-206ENST00000492058 SF3B2Q13435 895 aaKnown RBP14.05□□□□□ -0.16
NCKAP1-206ENST00000492058 PTCH1Q13635 1447 aa14.05□□□□□ -0.16
NCKAP1-206ENST00000492058 ZNF467Q7Z7K2 595 aaPredicted RBP14.04□□□□□ -0.16
NCKAP1-206ENST00000492058 XRN1Q8IZH2 1706 aaKnown RBP14.04□□□□□ -0.16
NCKAP1-206ENST00000492058 EP400Q96L91 3159 aa14.04□□□□□ -0.16
NCKAP1-206ENST00000492058 FOXO3O43524 673 aa14.03□□□□□ -0.16
NCKAP1-206ENST00000492058 NUTM2FA1L443 756 aa14.02□□□□□ -0.17
NCKAP1-206ENST00000492058 PSDA5PKW4 1024 aaPredicted RBP14.02□□□□□ -0.17
NCKAP1-206ENST00000492058 TMEM121BQ9BXQ6 578 aaPredicted RBP14.02□□□□□ -0.17
NCKAP1-206ENST00000492058 NRXN3Q9Y4C0 1643 aa14.01□□□□□ -0.17
NCKAP1-206ENST00000492058 BCL9LQ86UU0 1499 aa14.01□□□□□ -0.17
NCKAP1-206ENST00000492058 ROBO2Q9HCK4 1378 aa14□□□□□ -0.17
NCKAP1-206ENST00000492058 UNC5CLQ8IV45 518 aa14□□□□□ -0.17
NCKAP1-206ENST00000492058 CCDC9Q9Y3X0 531 aaKnown RBP14□□□□□ -0.17
NCKAP1-206ENST00000492058 BLMP54132 1417 aaPredicted RBP13.99□□□□□ -0.17
NCKAP1-206ENST00000492058 NALCNQ8IZF0 1738 aa13.99□□□□□ -0.17
NCKAP1-206ENST00000492058 NPHP3Q7Z494 1330 aa13.99□□□□□ -0.17
NCKAP1-206ENST00000492058 MKRN3Q13064 507 aaKnown RBP13.99□□□□□ -0.17
NCKAP1-206ENST00000492058 HAP1P54257 671 aaPredicted RBP13.98□□□□□ -0.17
NCKAP1-206ENST00000492058 SEPT12Q8IYM1 358 aa13.98□□□□□ -0.17
NCKAP1-206ENST00000492058 A0A0G2JS52 829 aa13.97□□□□□ -0.17
NCKAP1-206ENST00000492058 VGFO15240 615 aaPredicted RBP13.97□□□□□ -0.17
NCKAP1-206ENST00000492058 VASPP50552 380 aaPredicted RBP13.97□□□□□ -0.17
NCKAP1-206ENST00000492058 MYT1Q01538 1121 aa13.97□□□□□ -0.17
NCKAP1-206ENST00000492058 IQGAP3Q86VI3 1631 aa13.97□□□□□ -0.17
NCKAP1-206ENST00000492058 MYOM2P54296 1465 aa13.95□□□□□ -0.18
NCKAP1-206ENST00000492058 RALGAPBQ86X10 1494 aa13.95□□□□□ -0.18
NCKAP1-206ENST00000492058 C3orf67Q6ZVT6 689 aa13.95□□□□□ -0.18
NCKAP1-206ENST00000492058 L3MBTL3Q96JM7 780 aaPredicted RBP13.95□□□□□ -0.18
NCKAP1-206ENST00000492058 STK26Q9P289 416 aa13.95□□□□□ -0.18
NCKAP1-206ENST00000492058 ROCK1Q13464 1354 aa13.95□□□□□ -0.18
NCKAP1-206ENST00000492058 HRCP23327 699 aa13.93□□□□□ -0.18
NCKAP1-206ENST00000492058 LMOD2Q6P5Q4 547 aa13.93□□□□□ -0.18
NCKAP1-206ENST00000492058 KRT27Q7Z3Y8 459 aa13.93□□□□□ -0.18
NCKAP1-206ENST00000492058 CABLES1Q8TDN4 633 aa13.93□□□□□ -0.18
NCKAP1-206ENST00000492058 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
NCKAP1-206ENST00000492058 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
NCKAP1-206ENST00000492058 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
NCKAP1-206ENST00000492058 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
NCKAP1-206ENST00000492058 LAMC1P11047 1609 aa13.91□□□□□ -0.18
NCKAP1-206ENST00000492058 CHRM1P11229 460 aaPredicted RBP13.91□□□□□ -0.18
NCKAP1-206ENST00000492058 BAG6P46379 1132 aa13.91□□□□□ -0.18
NCKAP1-206ENST00000492058 KRT28Q7Z3Y7 464 aa13.91□□□□□ -0.18
NCKAP1-206ENST00000492058 PXDNQ92626 1479 aa13.91□□□□□ -0.18
NCKAP1-206ENST00000492058 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
NCKAP1-206ENST00000492058 HFM1A2PYH4 1435 aa13.9□□□□□ -0.19
NCKAP1-206ENST00000492058 EN1Q05925 392 aaPredicted RBP13.89□□□□□ -0.19
NCKAP1-206ENST00000492058 R3HDM1Q15032 1099 aaKnown RBP13.89□□□□□ -0.19
NCKAP1-206ENST00000492058 VPS72Q15906 364 aa13.89□□□□□ -0.19
NCKAP1-206ENST00000492058 SPHKAPQ2M3C7 1700 aa13.89□□□□□ -0.19
NCKAP1-206ENST00000492058 SPATA31A3Q5VYP0 1347 aa13.89□□□□□ -0.19
NCKAP1-206ENST00000492058 GLI3P10071 1580 aa13.88□□□□□ -0.19
NCKAP1-206ENST00000492058 FAM182BQ5T319 152 aa13.88□□□□□ -0.19
NCKAP1-206ENST00000492058 CLTCL1P53675 1640 aa13.87□□□□□ -0.19
NCKAP1-206ENST00000492058 SLIT2O94813 1529 aa13.87□□□□□ -0.19
NCKAP1-206ENST00000492058 PSEN1P49768 467 aa13.87□□□□□ -0.19
NCKAP1-206ENST00000492058 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
NCKAP1-206ENST00000492058 PDCD7Q8N8D1 485 aaKnown RBP13.87□□□□□ -0.19
NCKAP1-206ENST00000492058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.191e-11■■□□□ 13
NCKAP1-206ENST00000492058 NAIPQ13075 1403 aa13.86□□□□□ -0.19
NCKAP1-206ENST00000492058 RPGRIP1LQ68CZ1 1315 aa13.86□□□□□ -0.19
NCKAP1-206ENST00000492058 FAM83GA6ND36 823 aa13.85□□□□□ -0.19
NCKAP1-206ENST00000492058 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
NCKAP1-206ENST00000492058 PSME1Q06323 249 aa13.85□□□□□ -0.19
NCKAP1-206ENST00000492058 TMEM132EQ6IEE7 984 aa13.85□□□□□ -0.19
NCKAP1-206ENST00000492058 BRWD3Q6RI45 1802 aa13.85□□□□□ -0.19
NCKAP1-206ENST00000492058 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
NCKAP1-206ENST00000492058 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
NCKAP1-206ENST00000492058 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
NCKAP1-206ENST00000492058 LRP5O75197 1615 aa13.83□□□□□ -0.2
NCKAP1-206ENST00000492058 YY1P25490 414 aa13.83□□□□□ -0.2
NCKAP1-206ENST00000492058 PHF8Q9UPP1 1060 aa13.82□□□□□ -0.2
NCKAP1-206ENST00000492058 ADGRF5Q8IZF2 1346 aa13.82□□□□□ -0.2
NCKAP1-206ENST00000492058 PLEKHH1Q9ULM0 1364 aa13.82□□□□□ -0.2
NCKAP1-206ENST00000492058 KIF1BO60333 1816 aa13.81□□□□□ -0.2
NCKAP1-206ENST00000492058 PDAP1Q13442 181 aaKnown RBP13.81□□□□□ -0.2
NCKAP1-206ENST00000492058 BTG4Q9NY30 223 aa13.81□□□□□ -0.2
NCKAP1-206ENST00000492058 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
NCKAP1-206ENST00000492058 G3V3G9 751 aa13.8□□□□□ -0.2
NCKAP1-206ENST00000492058 EZH2Q15910 746 aaKnown RBP13.8□□□□□ -0.2
NCKAP1-206ENST00000492058 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.8□□□□□ -0.2
NCKAP1-206ENST00000492058 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms