RNA–Protein interactions for RNA: ENST00000492034.1

POLR1A-209, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-209ENST00000492034 COG3Q96JB2 828 aa18.7■□□□□ 0.58
POLR1A-209ENST00000492034 CFAP53Q96M91 514 aa18.7■□□□□ 0.58
POLR1A-209ENST00000492034 ZNF335Q9H4Z2 1342 aaPredicted RBP18.69■□□□□ 0.58
POLR1A-209ENST00000492034 STRCP1A6NGW2 1772 aa18.68■□□□□ 0.58
POLR1A-209ENST00000492034 TNNT2P45379 298 aaPredicted RBP18.67■□□□□ 0.58
POLR1A-209ENST00000492034 WDR43Q15061 677 aaKnown RBP eCLIP18.67■□□□□ 0.58
POLR1A-209ENST00000492034 INSRP06213 1382 aa18.67■□□□□ 0.58
POLR1A-209ENST00000492034 KIF20BQ96Q89 1820 aa18.66■□□□□ 0.58
POLR1A-209ENST00000492034 PSME1Q06323 249 aa18.66■□□□□ 0.58
POLR1A-209ENST00000492034 NME9Q86XW9 330 aa18.66■□□□□ 0.58
POLR1A-209ENST00000492034 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
POLR1A-209ENST00000492034 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
POLR1A-209ENST00000492034 LRRC7Q96NW7 1537 aa18.65■□□□□ 0.58
POLR1A-209ENST00000492034 MTHFSP49914 203 aa18.65■□□□□ 0.58
POLR1A-209ENST00000492034 C1orf167Q5SNV9 1468 aa18.65■□□□□ 0.58
POLR1A-209ENST00000492034 RGPD8O14715 1765 aaPredicted RBP18.64■□□□□ 0.57
POLR1A-209ENST00000492034 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
POLR1A-209ENST00000492034 AATKQ6ZMQ8 1374 aa18.62■□□□□ 0.57
POLR1A-209ENST00000492034 MST1RQ04912 1400 aa18.61■□□□□ 0.57
POLR1A-209ENST00000492034 USP31Q70CQ4 1352 aa18.61■□□□□ 0.57
POLR1A-209ENST00000492034 ORAI2Q96SN7 254 aa18.61■□□□□ 0.57
POLR1A-209ENST00000492034 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
POLR1A-209ENST00000492034 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
POLR1A-209ENST00000492034 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
POLR1A-209ENST00000492034 KIF1AQ12756 1690 aa18.6■□□□□ 0.57
POLR1A-209ENST00000492034 ABTB2Q8N961 1025 aa18.59■□□□□ 0.57
POLR1A-209ENST00000492034 FOXO3O43524 673 aa18.58■□□□□ 0.56
POLR1A-209ENST00000492034 NLRP6P59044 892 aa18.57■□□□□ 0.56
POLR1A-209ENST00000492034 KRT28Q7Z3Y7 464 aa18.57■□□□□ 0.56
POLR1A-209ENST00000492034 ZRANB1Q9UGI0 708 aa18.57■□□□□ 0.56
POLR1A-209ENST00000492034 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
POLR1A-209ENST00000492034 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
POLR1A-209ENST00000492034 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
POLR1A-209ENST00000492034 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
POLR1A-209ENST00000492034 POLKQ9UBT6 870 aa18.56■□□□□ 0.56
POLR1A-209ENST00000492034 ADAMTS8Q9UP79 889 aa18.56■□□□□ 0.56
POLR1A-209ENST00000492034 PNPLA6Q8IY17 1366 aa18.54■□□□□ 0.56
POLR1A-209ENST00000492034 ZBED9Q6R2W3 1325 aa18.53■□□□□ 0.56
POLR1A-209ENST00000492034 PPM1GO15355 546 aaPredicted RBP18.53■□□□□ 0.56
POLR1A-209ENST00000492034 DIAPH1O60610 1272 aaKnown RBP18.53■□□□□ 0.56
POLR1A-209ENST00000492034 PNNQ9H307 717 aaKnown RBP18.53■□□□□ 0.56
POLR1A-209ENST00000492034 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
POLR1A-209ENST00000492034 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.56
POLR1A-209ENST00000492034 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
POLR1A-209ENST00000492034 KCNH5Q8NCM2 988 aa18.52■□□□□ 0.56
POLR1A-209ENST00000492034 SBNO1A3KN83 1393 aa18.51■□□□□ 0.55
POLR1A-209ENST00000492034 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
POLR1A-209ENST00000492034 BRINP3Q76B58 766 aa18.49■□□□□ 0.55
POLR1A-209ENST00000492034 KIF24Q5T7B8 1368 aa18.49■□□□□ 0.55
POLR1A-209ENST00000492034 CDK12Q9NYV4 1490 aaPredicted RBP18.49■□□□□ 0.55
POLR1A-209ENST00000492034 PIK3C2AO00443 1686 aa18.48■□□□□ 0.55
POLR1A-209ENST00000492034 U2AF1L5P0DN76 240 aaPredicted RBP18.48■□□□□ 0.55
POLR1A-209ENST00000492034 U2AF1Q01081 240 aaKnown RBP eCLIP18.48■□□□□ 0.55
POLR1A-209ENST00000492034 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
POLR1A-209ENST00000492034 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
POLR1A-209ENST00000492034 USP54Q70EL1 1684 aa18.47■□□□□ 0.55
POLR1A-209ENST00000492034 MAP2P11137 1827 aaKnown RBP18.46■□□□□ 0.55
POLR1A-209ENST00000492034 LTBP4Q8N2S1 1624 aa18.46■□□□□ 0.55
POLR1A-209ENST00000492034 U2SURPO15042 1029 aaKnown RBP18.46■□□□□ 0.55
POLR1A-209ENST00000492034 FBLN1P23142 703 aa18.46■□□□□ 0.55
POLR1A-209ENST00000492034 AMPHP49418 695 aa18.46■□□□□ 0.55
POLR1A-209ENST00000492034 XPCQ01831 940 aaPredicted RBP18.46■□□□□ 0.55
POLR1A-209ENST00000492034 NUTM2GQ5VZR2 741 aa18.46■□□□□ 0.55
POLR1A-209ENST00000492034 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
POLR1A-209ENST00000492034 RUNDC1Q96C34 613 aa18.46■□□□□ 0.55
POLR1A-209ENST00000492034 COL3A1P02461 1466 aaPredicted RBP18.45■□□□□ 0.54
POLR1A-209ENST00000492034 ARHGEF10O15013 1369 aa18.44■□□□□ 0.54
POLR1A-209ENST00000492034 SOX12O15370 315 aa18.44■□□□□ 0.54
POLR1A-209ENST00000492034 NEFMP07197 916 aa18.44■□□□□ 0.54
POLR1A-209ENST00000492034 PDE3BQ13370 1112 aa18.44■□□□□ 0.54
POLR1A-209ENST00000492034 MAP3K19Q56UN5 1328 aa18.44■□□□□ 0.54
POLR1A-209ENST00000492034 FLT4P35916 1363 aa18.43■□□□□ 0.54
POLR1A-209ENST00000492034 FCHSD2O94868 740 aa18.43■□□□□ 0.54
POLR1A-209ENST00000492034 IL13P35225 146 aa18.43■□□□□ 0.54
POLR1A-209ENST00000492034 NCBP3Q53F19 620 aaKnown RBP18.42■□□□□ 0.54
POLR1A-209ENST00000492034 TRPM3Q9HCF6 1732 aaPredicted RBP18.42■□□□□ 0.54
POLR1A-209ENST00000492034 USP19O94966 1318 aa18.42■□□□□ 0.54
POLR1A-209ENST00000492034 SPATA31A3Q5VYP0 1347 aa18.42■□□□□ 0.54
POLR1A-209ENST00000492034 SHPRHQ149N8 1683 aa18.41■□□□□ 0.54
POLR1A-209ENST00000492034 GCP02774 474 aa18.41■□□□□ 0.54
POLR1A-209ENST00000492034 SOS2Q07890 1332 aaPredicted RBP18.41■□□□□ 0.54
POLR1A-209ENST00000492034 RTL1A6NKG5 1358 aa18.41■□□□□ 0.54
POLR1A-209ENST00000492034 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
POLR1A-209ENST00000492034 PXDNQ92626 1479 aa18.4■□□□□ 0.54
POLR1A-209ENST00000492034 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
POLR1A-209ENST00000492034 TOM1O60784 492 aa18.39■□□□□ 0.53
POLR1A-209ENST00000492034 DDX17Q92841 729 aaKnown RBP18.39■□□□□ 0.53
POLR1A-209ENST00000492034 MAPK8IP3Q9UPT6 1336 aa18.39■□□□□ 0.53
POLR1A-209ENST00000492034 APAF1O14727 1248 aa18.38■□□□□ 0.53
POLR1A-209ENST00000492034 EIF4A2Q14240 407 aaKnown RBP18.38■□□□□ 0.53
POLR1A-209ENST00000492034 IP6K1Q92551 441 aa18.38■□□□□ 0.53
POLR1A-209ENST00000492034 SLIT3O75094 1523 aa18.38■□□□□ 0.53
POLR1A-209ENST00000492034 HOXC9P31274 260 aa18.37■□□□□ 0.53
POLR1A-209ENST00000492034 HSP90AB2PQ58FF8 381 aa18.37■□□□□ 0.53
POLR1A-209ENST00000492034 ALS2Q96Q42 1657 aa18.37■□□□□ 0.53
POLR1A-209ENST00000492034 MARF1Q9Y4F3 1742 aaKnown RBP18.35■□□□□ 0.53
POLR1A-209ENST00000492034 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
POLR1A-209ENST00000492034 TCP11L2Q8N4U5 519 aa18.35■□□□□ 0.53
POLR1A-209ENST00000492034 SALL2Q9Y467 1007 aaPredicted RBP18.35■□□□□ 0.53
POLR1A-209ENST00000492034 NFAT5O94916 1531 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms