RNA–Protein interactions for RNA: ENST00000491787.7

PBX3-209, Transcript of PBX homeobox 3, humanhuman

TSL 5

Gene PBX3, Length 875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-209ENST00000491787 COL14A1Q05707 1796 aaKnown RBP25.15■■□□□ 1.62
PBX3-209ENST00000491787 CDK19Q9BWU1 502 aa25.13■■□□□ 1.61
PBX3-209ENST00000491787 BLMP54132 1417 aaPredicted RBP25.12■■□□□ 1.61
PBX3-209ENST00000491787 POLR3AO14802 1390 aaPredicted RBP25.11■■□□□ 1.61
PBX3-209ENST00000491787 NBPF1Q3BBV0 1214 aa25.11■■□□□ 1.61
PBX3-209ENST00000491787 BTG4Q9NY30 223 aa25.11■■□□□ 1.61
PBX3-209ENST00000491787 TOPAZ1Q8N9V7 1692 aa25.1■■□□□ 1.61
PBX3-209ENST00000491787 CCDC61Q9Y6R9 512 aa25.1■■□□□ 1.61
PBX3-209ENST00000491787 PLEKHG3A1L390 1219 aa25.09■■□□□ 1.61
PBX3-209ENST00000491787 CCDC9Q9Y3X0 531 aaKnown RBP25.09■■□□□ 1.61
PBX3-209ENST00000491787 PAK3O75914 559 aaPredicted RBP25.08■■□□□ 1.61
PBX3-209ENST00000491787 KRT27Q7Z3Y8 459 aa25.08■■□□□ 1.61
PBX3-209ENST00000491787 ZRANB1Q9UGI0 708 aa25.08■■□□□ 1.61
PBX3-209ENST00000491787 NBPF8Q3BBV2 869 aa25.06■■□□□ 1.6
PBX3-209ENST00000491787 ACEP12821 1306 aa25.05■■□□□ 1.6
PBX3-209ENST00000491787 SPATA31A5Q5VU36 1347 aa25.05■■□□□ 1.6
PBX3-209ENST00000491787 SPATA31A7Q8IWB4 1347 aa25.05■■□□□ 1.6
PBX3-209ENST00000491787 PHRF1Q9P1Y6 1649 aaKnown RBP25.02■■□□□ 1.6
PBX3-209ENST00000491787 FAM98CQ17RN3 349 aaKnown RBP25.02■■□□□ 1.6
PBX3-209ENST00000491787 PRDM11Q9NQV5 511 aa25.02■■□□□ 1.6
PBX3-209ENST00000491787 DEFB132Q7Z7B7 95 aa25.01■■□□□ 1.59
PBX3-209ENST00000491787 KIAA0232Q92628 1395 aa25.01■■□□□ 1.59
PBX3-209ENST00000491787 CENPJQ9HC77 1338 aaPredicted RBP24.99■■□□□ 1.59
PBX3-209ENST00000491787 THSD7AQ9UPZ6 1657 aa24.98■■□□□ 1.59
PBX3-209ENST00000491787 L3MBTL2Q969R5 705 aa24.98■■□□□ 1.59
PBX3-209ENST00000491787 SF3B2Q13435 895 aaKnown RBP24.97■■□□□ 1.59
PBX3-209ENST00000491787 SPATA31A1Q5TZJ5 1347 aa24.96■■□□□ 1.59
PBX3-209ENST00000491787 CHRNA2Q15822 529 aa24.95■■□□□ 1.58
PBX3-209ENST00000491787 BRD4O60885 1362 aaPredicted RBP24.94■■□□□ 1.58
PBX3-209ENST00000491787 USP19O94966 1318 aa24.94■■□□□ 1.58
PBX3-209ENST00000491787 ZC3H6P61129 1189 aaKnown RBP24.94■■□□□ 1.58
PBX3-209ENST00000491787 NUTM2GQ5VZR2 741 aa24.94■■□□□ 1.58
PBX3-209ENST00000491787 ABTB2Q8N961 1025 aa24.94■■□□□ 1.58
PBX3-209ENST00000491787 QRICH2Q9H0J4 1663 aa24.94■■□□□ 1.58
PBX3-209ENST00000491787 PPIP5K1Q6PFW1 1433 aa24.94■■□□□ 1.58
PBX3-209ENST00000491787 CPDO75976 1380 aa24.93■■□□□ 1.58
PBX3-209ENST00000491787 A0A0G2JS52 829 aa24.92■■□□□ 1.58
PBX3-209ENST00000491787 SRPK2P78362 688 aaKnown RBP24.92■■□□□ 1.58
PBX3-209ENST00000491787 MYT1Q01538 1121 aa24.92■■□□□ 1.58
PBX3-209ENST00000491787 CABP2Q9NPB3 220 aa24.92■■□□□ 1.58
PBX3-209ENST00000491787 NRKQ7Z2Y5 1582 aa24.92■■□□□ 1.58
PBX3-209ENST00000491787 SIN3AQ96ST3 1273 aa24.91■■□□□ 1.58
PBX3-209ENST00000491787 TRPM1Q7Z4N2 1603 aa24.9■■□□□ 1.58
PBX3-209ENST00000491787 RGPD1P0DJD0 1748 aa24.89■■□□□ 1.58
PBX3-209ENST00000491787 LMO7Q8WWI1 1683 aa24.89■■□□□ 1.58
PBX3-209ENST00000491787 CAMTA1Q9Y6Y1 1673 aa24.89■■□□□ 1.58
PBX3-209ENST00000491787 BAG6P46379 1132 aa24.88■■□□□ 1.57
PBX3-209ENST00000491787 BARGINQ6ZT62 677 aa24.88■■□□□ 1.57
PBX3-209ENST00000491787 NLRP13Q86W25 1043 aa24.88■■□□□ 1.57
PBX3-209ENST00000491787 SSH2Q76I76 1423 aa24.87■■□□□ 1.57
PBX3-209ENST00000491787 GCP02774 474 aa24.87■■□□□ 1.57
PBX3-209ENST00000491787 STRN4Q9NRL3 753 aa24.87■■□□□ 1.57
PBX3-209ENST00000491787 CABP1Q9NZU7 370 aa24.87■■□□□ 1.57
PBX3-209ENST00000491787 FAM182BQ5T319 152 aa24.86■■□□□ 1.57
PBX3-209ENST00000491787 DISP2A7MBM2 1401 aa24.86■■□□□ 1.57
PBX3-209ENST00000491787 USP6P35125 1406 aa24.85■■□□□ 1.57
PBX3-209ENST00000491787 EVA1CP58658 441 aa24.84■■□□□ 1.57
PBX3-209ENST00000491787 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
PBX3-209ENST00000491787 EVC2Q86UK5 1308 aa24.83■■□□□ 1.56
PBX3-209ENST00000491787 LARP1Q6PKG0 1096 aaKnown RBP24.82■■□□□ 1.56
PBX3-209ENST00000491787 FAM196AQ6ZSG2 479 aa24.82■■□□□ 1.56
PBX3-209ENST00000491787 EN1Q05925 392 aaPredicted RBP24.81■■□□□ 1.56
PBX3-209ENST00000491787 THRAP3Q9Y2W1 955 aaKnown RBP24.81■■□□□ 1.56
PBX3-209ENST00000491787 TCP11L2Q8N4U5 519 aa24.8■■□□□ 1.56
PBX3-209ENST00000491787 SLIT3O75094 1523 aa24.8■■□□□ 1.56
PBX3-209ENST00000491787 NEUROD1Q13562 356 aa24.79■■□□□ 1.56
PBX3-209ENST00000491787 ROCK2O75116 1388 aaKnown RBP24.79■■□□□ 1.56
PBX3-209ENST00000491787 COL5A2P05997 1499 aaPredicted RBP24.78■■□□□ 1.56
PBX3-209ENST00000491787 NLRP6P59044 892 aa24.78■■□□□ 1.56
PBX3-209ENST00000491787 ZNF692Q9BU19 519 aaPredicted RBP24.78■■□□□ 1.56
PBX3-209ENST00000491787 USP35Q9P2H5 1018 aa24.78■■□□□ 1.56
PBX3-209ENST00000491787 AATKQ6ZMQ8 1374 aa24.77■■□□□ 1.56
PBX3-209ENST00000491787 COL18A1P39060 1754 aa24.77■■□□□ 1.56
PBX3-209ENST00000491787 AKAP12Q02952 1782 aa24.77■■□□□ 1.56
PBX3-209ENST00000491787 LRP5O75197 1615 aa24.76■■□□□ 1.55
PBX3-209ENST00000491787 PIK3C2AO00443 1686 aa24.76■■□□□ 1.55
PBX3-209ENST00000491787 CAMKK2Q96RR4 588 aa24.75■■□□□ 1.55
PBX3-209ENST00000491787 TRIM37O94972 964 aa24.74■■□□□ 1.55
PBX3-209ENST00000491787 PDE3BQ13370 1112 aa24.74■■□□□ 1.55
PBX3-209ENST00000491787 PARP4Q9UKK3 1724 aaKnown RBP24.74■■□□□ 1.55
PBX3-209ENST00000491787 CPSF1Q10570 1443 aaKnown RBP24.73■■□□□ 1.55
PBX3-209ENST00000491787 CRB1P82279 1406 aa24.72■■□□□ 1.55
PBX3-209ENST00000491787 SBNO2Q9Y2G9 1366 aa24.72■■□□□ 1.55
PBX3-209ENST00000491787 TTC21BQ7Z4L5 1316 aa24.72■■□□□ 1.55
PBX3-209ENST00000491787 EZH2Q15910 746 aaKnown RBP24.72■■□□□ 1.55
PBX3-209ENST00000491787 PARD3Q8TEW0 1356 aa24.71■■□□□ 1.55
PBX3-209ENST00000491787 PSDA5PKW4 1024 aaPredicted RBP24.71■■□□□ 1.55
PBX3-209ENST00000491787 TTC21AQ8NDW8 1320 aa24.69■■□□□ 1.54
PBX3-209ENST00000491787 ARHGEF25Q86VW2 580 aa24.69■■□□□ 1.54
PBX3-209ENST00000491787 APBA3O96018 575 aa24.68■■□□□ 1.54
PBX3-209ENST00000491787 AXIN2Q9Y2T1 843 aa24.68■■□□□ 1.54
PBX3-209ENST00000491787 C11orf95C9JLR9 678 aaPredicted RBP24.67■■□□□ 1.54
PBX3-209ENST00000491787 KCNH5Q8NCM2 988 aa24.66■■□□□ 1.54
PBX3-209ENST00000491787 RGPD5Q99666 1765 aa24.65■■□□□ 1.54
PBX3-209ENST00000491787 MON2Q7Z3U7 1717 aa24.65■■□□□ 1.54
PBX3-209ENST00000491787 PEAK1Q9H792 1746 aa24.65■■□□□ 1.54
PBX3-209ENST00000491787 RREB1Q92766 1687 aa24.65■■□□□ 1.54
PBX3-209ENST00000491787 R3HDM1Q15032 1099 aaKnown RBP24.64■■□□□ 1.54
PBX3-209ENST00000491787 WDR17Q8IZU2 1322 aa24.63■■□□□ 1.53
PBX3-209ENST00000491787 SBF2Q86WG5 1849 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms