RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 KIDINS220Q9ULH0 1771 aa13.55□□□□□ -0.24
SNED1-211ENST00000491761 APBB1O00213 710 aa13.55□□□□□ -0.24
SNED1-211ENST00000491761 MROH1Q8NDA8 1641 aa13.54□□□□□ -0.24
SNED1-211ENST00000491761 DDX19BQ9UMR2 479 aa13.54□□□□□ -0.24
SNED1-211ENST00000491761 PDZRN3Q9UPQ7 1066 aa13.54□□□□□ -0.24
SNED1-211ENST00000491761 TMPOP42166 694 aaKnown RBP13.54□□□□□ -0.24
SNED1-211ENST00000491761 CDK19Q9BWU1 502 aa13.54□□□□□ -0.24
SNED1-211ENST00000491761 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
SNED1-211ENST00000491761 HECW2Q9P2P5 1572 aa13.54□□□□□ -0.24
SNED1-211ENST00000491761 NEO1Q92859 1461 aa13.54□□□□□ -0.24
SNED1-211ENST00000491761 CHMP4BQ9H444 224 aaKnown RBP13.54□□□□□ -0.24
SNED1-211ENST00000491761 CALD1Q05682 793 aaKnown RBP13.53□□□□□ -0.24
SNED1-211ENST00000491761 ABCC3O15438 1527 aa13.53□□□□□ -0.24
SNED1-211ENST00000491761 MYOM1P52179 1685 aa13.53□□□□□ -0.24
SNED1-211ENST00000491761 HDGFP51858 240 aaKnown RBP13.53□□□□□ -0.24
SNED1-211ENST00000491761 CABP1Q9NZU7 370 aa13.53□□□□□ -0.24
SNED1-211ENST00000491761 NCBP3Q53F19 620 aaKnown RBP13.52□□□□□ -0.24
SNED1-211ENST00000491761 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.25
SNED1-211ENST00000491761 GSE1Q14687 1217 aa13.51□□□□□ -0.25
SNED1-211ENST00000491761 CCDC9Q9Y3X0 531 aaKnown RBP13.51□□□□□ -0.25
SNED1-211ENST00000491761 A0A1W2PP64 1363 aa13.51□□□□□ -0.25
SNED1-211ENST00000491761 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
SNED1-211ENST00000491761 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
SNED1-211ENST00000491761 KIF16BQ96L93 1317 aa13.5□□□□□ -0.25
SNED1-211ENST00000491761 FYB1O15117 783 aa13.5□□□□□ -0.25
SNED1-211ENST00000491761 RLBP1P12271 317 aa13.5□□□□□ -0.25
SNED1-211ENST00000491761 ABCC11Q96J66 1382 aa13.5□□□□□ -0.25
SNED1-211ENST00000491761 TNNQ9UQP3 1299 aa13.49□□□□□ -0.25
SNED1-211ENST00000491761 MROH2AA6NES4 1674 aa13.49□□□□□ -0.25
SNED1-211ENST00000491761 ATF7IPQ6VMQ6 1270 aa13.49□□□□□ -0.25
SNED1-211ENST00000491761 QRICH2Q9H0J4 1663 aa13.48□□□□□ -0.25
SNED1-211ENST00000491761 SSH1Q8WYL5 1049 aa13.48□□□□□ -0.25
SNED1-211ENST00000491761 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
SNED1-211ENST00000491761 FCHSD2O94868 740 aa13.48□□□□□ -0.25
SNED1-211ENST00000491761 PRKAR2BP31323 418 aa13.48□□□□□ -0.25
SNED1-211ENST00000491761 IL27Q8NEV9 243 aa13.48□□□□□ -0.25
SNED1-211ENST00000491761 PHF23Q9BUL5 403 aaPredicted RBP13.47□□□□□ -0.25
SNED1-211ENST00000491761 IL16Q14005 1332 aa13.47□□□□□ -0.25
SNED1-211ENST00000491761 MFAP1P55081 439 aaKnown RBP13.47□□□□□ -0.25
SNED1-211ENST00000491761 HSCBQ8IWL3 235 aa13.47□□□□□ -0.25
SNED1-211ENST00000491761 ADGRB1O14514 1584 aa13.46□□□□□ -0.25
SNED1-211ENST00000491761 EID1Q9Y6B2 187 aa13.46□□□□□ -0.25
SNED1-211ENST00000491761 MYO3AQ8NEV4 1616 aa13.46□□□□□ -0.25
SNED1-211ENST00000491761 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.25
SNED1-211ENST00000491761 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.25
SNED1-211ENST00000491761 LMOD3Q0VAK6 560 aa13.46□□□□□ -0.26
SNED1-211ENST00000491761 GLI2P10070 1586 aa13.45□□□□□ -0.26
SNED1-211ENST00000491761 HMOX1P09601 288 aa13.45□□□□□ -0.26
SNED1-211ENST00000491761 TRIM27P14373 513 aa13.45□□□□□ -0.26
SNED1-211ENST00000491761 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNED1-211ENST00000491761 FRAT2O75474 233 aaPredicted RBP13.45□□□□□ -0.26
SNED1-211ENST00000491761 COG3Q96JB2 828 aa13.45□□□□□ -0.26
SNED1-211ENST00000491761 ZFYVE9O95405 1425 aa13.44□□□□□ -0.26
SNED1-211ENST00000491761 WAPLQ7Z5K2 1190 aa13.44□□□□□ -0.26
SNED1-211ENST00000491761 YEATS2Q9ULM3 1422 aa13.44□□□□□ -0.26
SNED1-211ENST00000491761 GNAI1P63096 354 aa13.44□□□□□ -0.26
SNED1-211ENST00000491761 FRMPD1Q5SYB0 1578 aa13.43□□□□□ -0.26
SNED1-211ENST00000491761 L1TD1Q5T7N2 865 aaKnown RBP13.43□□□□□ -0.26
SNED1-211ENST00000491761 PPP6R1Q9UPN7 881 aa13.43□□□□□ -0.26
SNED1-211ENST00000491761 MSNP26038 577 aaKnown RBP13.43□□□□□ -0.26
SNED1-211ENST00000491761 PPLO60437 1756 aa13.43□□□□□ -0.26
SNED1-211ENST00000491761 TMEM57Q8N5G2 664 aa13.43□□□□□ -0.26
SNED1-211ENST00000491761 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
SNED1-211ENST00000491761 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 ZNF428Q96B54 188 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 TRIM35Q9UPQ4 493 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 CAMSAP1Q5T5Y3 1602 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 TULP4Q9NRJ4 1543 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 IFT172Q9UG01 1749 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 ALDH1L2Q3SY69 923 aa13.42□□□□□ -0.26
SNED1-211ENST00000491761 SEC24BO95487 1268 aa13.41□□□□□ -0.26
SNED1-211ENST00000491761 C22orf23Q9BZE7 217 aa13.41□□□□□ -0.26
SNED1-211ENST00000491761 NPHP1O15259 732 aa13.41□□□□□ -0.26
SNED1-211ENST00000491761 NFE2L2Q16236 605 aa13.41□□□□□ -0.26
SNED1-211ENST00000491761 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
SNED1-211ENST00000491761 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
SNED1-211ENST00000491761 IQSEC2Q5JU85 1478 aa13.4□□□□□ -0.26
SNED1-211ENST00000491761 NEXMIFQ5QGS0 1516 aa13.4□□□□□ -0.26
SNED1-211ENST00000491761 TXNDC2Q86VQ3 553 aa13.4□□□□□ -0.26
SNED1-211ENST00000491761 BRPF3Q9ULD4 1205 aa13.4□□□□□ -0.26
SNED1-211ENST00000491761 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
SNED1-211ENST00000491761 LNPKQ9C0E8 428 aa13.39□□□□□ -0.27
SNED1-211ENST00000491761 ANKRD45Q5TZF3 282 aa13.39□□□□□ -0.27
SNED1-211ENST00000491761 FOXD4L5Q5VV16 416 aaPredicted RBP13.39□□□□□ -0.27
SNED1-211ENST00000491761 FOXD4L4Q8WXT5 416 aaPredicted RBP13.39□□□□□ -0.27
SNED1-211ENST00000491761 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
SNED1-211ENST00000491761 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
SNED1-211ENST00000491761 WASLO00401 505 aaPredicted RBP13.38□□□□□ -0.27
SNED1-211ENST00000491761 API5Q9BZZ5 524 aaKnown RBP13.38□□□□□ -0.27
SNED1-211ENST00000491761 DIP2CQ9Y2E4 1556 aa13.38□□□□□ -0.27
SNED1-211ENST00000491761 ZMYM3Q14202 1370 aa13.38□□□□□ -0.27
SNED1-211ENST00000491761 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 FBLN1P23142 703 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 CASC1Q6TDU7 716 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 EMILIN1Q9Y6C2 1016 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 NOL8Q76FK4 1167 aaKnown RBP13.37□□□□□ -0.27
SNED1-211ENST00000491761 NME9Q86XW9 330 aa13.37□□□□□ -0.27
SNED1-211ENST00000491761 NUDT16Q96DE0 195 aaKnown RBP13.37□□□□□ -0.27
SNED1-211ENST00000491761 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
SNED1-211ENST00000491761 RIMS2Q9UQ26 1411 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms