RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 QRICH2Q9H0J4 1663 aa16.01■□□□□ 0.15
TMEM39A-211ENST00000491685 STAC3Q96MF2 364 aa15.99■□□□□ 0.15
TMEM39A-211ENST00000491685 FAM83GA6ND36 823 aa15.98■□□□□ 0.15
TMEM39A-211ENST00000491685 GPRASP1Q5JY77 1395 aa15.98■□□□□ 0.15
TMEM39A-211ENST00000491685 NBPF1Q3BBV0 1214 aa15.97■□□□□ 0.15
TMEM39A-211ENST00000491685 TRPM1Q7Z4N2 1603 aa15.97■□□□□ 0.15
TMEM39A-211ENST00000491685 VPS72Q15906 364 aa15.96■□□□□ 0.15
TMEM39A-211ENST00000491685 NRKQ7Z2Y5 1582 aa15.96■□□□□ 0.14
TMEM39A-211ENST00000491685 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
TMEM39A-211ENST00000491685 NUDT16Q96DE0 195 aaKnown RBP15.95■□□□□ 0.14
TMEM39A-211ENST00000491685 THSD7AQ9UPZ6 1657 aa15.95■□□□□ 0.14
TMEM39A-211ENST00000491685 CDK19Q9BWU1 502 aa15.94■□□□□ 0.14
TMEM39A-211ENST00000491685 POLR3AO14802 1390 aaPredicted RBP15.93■□□□□ 0.14
TMEM39A-211ENST00000491685 SEPT12Q8IYM1 358 aa15.93■□□□□ 0.14
TMEM39A-211ENST00000491685 CCDC9Q9Y3X0 531 aaKnown RBP15.93■□□□□ 0.14
TMEM39A-211ENST00000491685 PAK3O75914 559 aaPredicted RBP15.92■□□□□ 0.14
TMEM39A-211ENST00000491685 BTG4Q9NY30 223 aa15.92■□□□□ 0.14
TMEM39A-211ENST00000491685 DEFB132Q7Z7B7 95 aa15.91■□□□□ 0.14
TMEM39A-211ENST00000491685 LMO7Q8WWI1 1683 aa15.9■□□□□ 0.14
TMEM39A-211ENST00000491685 ONECUT3O60422 494 aaPredicted RBP15.9■□□□□ 0.14
TMEM39A-211ENST00000491685 RGPD1P0DJD0 1748 aa15.9■□□□□ 0.14
TMEM39A-211ENST00000491685 ACEP12821 1306 aa15.9■□□□□ 0.14
TMEM39A-211ENST00000491685 KIAA0232Q92628 1395 aa15.89■□□□□ 0.13
TMEM39A-211ENST00000491685 TNS1Q9HBL0 1735 aaKnown RBP15.89■□□□□ 0.13
TMEM39A-211ENST00000491685 SF3B2Q13435 895 aaKnown RBP15.89■□□□□ 0.13
TMEM39A-211ENST00000491685 NUTM2GQ5VZR2 741 aa15.89■□□□□ 0.13
TMEM39A-211ENST00000491685 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
TMEM39A-211ENST00000491685 FAM98CQ17RN3 349 aaKnown RBP15.88■□□□□ 0.13
TMEM39A-211ENST00000491685 L3MBTL2Q969R5 705 aa15.88■□□□□ 0.13
TMEM39A-211ENST00000491685 SIN3AQ96ST3 1273 aa15.88■□□□□ 0.13
TMEM39A-211ENST00000491685 CENPJQ9HC77 1338 aaPredicted RBP15.88■□□□□ 0.13
TMEM39A-211ENST00000491685 PIK3C2AO00443 1686 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 AKAP12Q02952 1782 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 PLEKHG3A1L390 1219 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 NBPF8Q3BBV2 869 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 KRT27Q7Z3Y8 459 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 CABP2Q9NPB3 220 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 PRDM11Q9NQV5 511 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 CCDC61Q9Y6R9 512 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 SPATA31A5Q5VU36 1347 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 SPATA31A7Q8IWB4 1347 aa15.86■□□□□ 0.13
TMEM39A-211ENST00000491685 A0A0G2JS52 829 aa15.85■□□□□ 0.13
TMEM39A-211ENST00000491685 MYT1Q01538 1121 aa15.85■□□□□ 0.13
TMEM39A-211ENST00000491685 CAMTA1Q9Y6Y1 1673 aa15.85■□□□□ 0.13
TMEM39A-211ENST00000491685 ZC3H6P61129 1189 aaKnown RBP15.84■□□□□ 0.13
TMEM39A-211ENST00000491685 SRPK2P78362 688 aaKnown RBP15.83■□□□□ 0.12
TMEM39A-211ENST00000491685 FAM182BQ5T319 152 aa15.83■□□□□ 0.12
TMEM39A-211ENST00000491685 USP19O94966 1318 aa15.83■□□□□ 0.12
TMEM39A-211ENST00000491685 SLIT3O75094 1523 aa15.82■□□□□ 0.12
TMEM39A-211ENST00000491685 WNK3Q9BYP7 1800 aa15.82■□□□□ 0.12
TMEM39A-211ENST00000491685 USP6P35125 1406 aa15.81■□□□□ 0.12
TMEM39A-211ENST00000491685 BAG6P46379 1132 aa15.81■□□□□ 0.12
TMEM39A-211ENST00000491685 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
TMEM39A-211ENST00000491685 SPATA31A1Q5TZJ5 1347 aa15.81■□□□□ 0.12
TMEM39A-211ENST00000491685 SSH2Q76I76 1423 aa15.81■□□□□ 0.12
TMEM39A-211ENST00000491685 COL18A1P39060 1754 aa15.8■□□□□ 0.12
TMEM39A-211ENST00000491685 PSDA5PKW4 1024 aaPredicted RBP15.8■□□□□ 0.12
TMEM39A-211ENST00000491685 ABTB2Q8N961 1025 aa15.8■□□□□ 0.12
TMEM39A-211ENST00000491685 STRN4Q9NRL3 753 aa15.8■□□□□ 0.12
TMEM39A-211ENST00000491685 RGPD5Q99666 1765 aa15.8■□□□□ 0.12
TMEM39A-211ENST00000491685 ROCK2O75116 1388 aaKnown RBP15.79■□□□□ 0.12
TMEM39A-211ENST00000491685 CPDO75976 1380 aa15.79■□□□□ 0.12
TMEM39A-211ENST00000491685 MON2Q7Z3U7 1717 aa15.79■□□□□ 0.12
TMEM39A-211ENST00000491685 PARP4Q9UKK3 1724 aaKnown RBP15.78■□□□□ 0.12
TMEM39A-211ENST00000491685 COL5A2P05997 1499 aaPredicted RBP15.78■□□□□ 0.12
TMEM39A-211ENST00000491685 DISP2A7MBM2 1401 aa15.77■□□□□ 0.12
TMEM39A-211ENST00000491685 CABP1Q9NZU7 370 aa15.77■□□□□ 0.12
TMEM39A-211ENST00000491685 LARP1Q6PKG0 1096 aaKnown RBP15.76■□□□□ 0.11
TMEM39A-211ENST00000491685 USP35Q9P2H5 1018 aa15.76■□□□□ 0.11
TMEM39A-211ENST00000491685 RREB1Q92766 1687 aa15.76■□□□□ 0.11
TMEM39A-211ENST00000491685 LRRC37A3O60309 1634 aa15.76■□□□□ 0.11
TMEM39A-211ENST00000491685 GCP02774 474 aa15.74■□□□□ 0.11
TMEM39A-211ENST00000491685 CCER1Q8TC90 406 aaPredicted RBP15.74■□□□□ 0.11
TMEM39A-211ENST00000491685 NUP188Q5SRE5 1749 aa15.74■□□□□ 0.11
TMEM39A-211ENST00000491685 PEAK1Q9H792 1746 aa15.74■□□□□ 0.11
TMEM39A-211ENST00000491685 BRD4O60885 1362 aaPredicted RBP15.74■□□□□ 0.11
TMEM39A-211ENST00000491685 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
TMEM39A-211ENST00000491685 NLRP13Q86W25 1043 aa15.73■□□□□ 0.11
TMEM39A-211ENST00000491685 USP54Q70EL1 1684 aa15.73■□□□□ 0.11
TMEM39A-211ENST00000491685 EN1Q05925 392 aaPredicted RBP15.72■□□□□ 0.11
TMEM39A-211ENST00000491685 SBF2Q86WG5 1849 aa15.72■□□□□ 0.11
TMEM39A-211ENST00000491685 NFAT5O94916 1531 aa15.72■□□□□ 0.11
TMEM39A-211ENST00000491685 ZBTB7CA1YPR0 619 aa15.71■□□□□ 0.11
TMEM39A-211ENST00000491685 EVA1CP58658 441 aa15.71■□□□□ 0.11
TMEM39A-211ENST00000491685 BARGINQ6ZT62 677 aa15.71■□□□□ 0.11
TMEM39A-211ENST00000491685 CPSF1Q10570 1443 aaKnown RBP15.7■□□□□ 0.1
TMEM39A-211ENST00000491685 NLRP6P59044 892 aa15.7■□□□□ 0.1
TMEM39A-211ENST00000491685 R3HDM1Q15032 1099 aaKnown RBP15.7■□□□□ 0.1
TMEM39A-211ENST00000491685 CD163L1Q9NR16 1453 aa15.7■□□□□ 0.1
TMEM39A-211ENST00000491685 LTN1O94822 1766 aa15.7■□□□□ 0.1
TMEM39A-211ENST00000491685 CRB1P82279 1406 aa15.69■□□□□ 0.1
TMEM39A-211ENST00000491685 TRIM37O94972 964 aa15.69■□□□□ 0.1
TMEM39A-211ENST00000491685 TTC21BQ7Z4L5 1316 aa15.68■□□□□ 0.1
TMEM39A-211ENST00000491685 CLSPNQ9HAW4 1339 aa15.68■□□□□ 0.1
TMEM39A-211ENST00000491685 AATKQ6ZMQ8 1374 aa15.68■□□□□ 0.1
TMEM39A-211ENST00000491685 SBNO2Q9Y2G9 1366 aa15.68■□□□□ 0.1
TMEM39A-211ENST00000491685 TCP11L2Q8N4U5 519 aa15.68■□□□□ 0.1
TMEM39A-211ENST00000491685 EZH2Q15910 746 aaKnown RBP15.67■□□□□ 0.1
TMEM39A-211ENST00000491685 PARD3Q8TEW0 1356 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms