RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 TERF2IPQ9NYB0 399 aa11.48□□□□□ -0.57
RNF38-209ENST00000491349 PHF8Q9UPP1 1060 aa11.48□□□□□ -0.57
RNF38-209ENST00000491349 CLEC11AQ9Y240 323 aa11.48□□□□□ -0.57
RNF38-209ENST00000491349 NPHP3Q7Z494 1330 aa11.48□□□□□ -0.57
RNF38-209ENST00000491349 PPIP5K1Q6PFW1 1433 aa11.47□□□□□ -0.57
RNF38-209ENST00000491349 TESK2Q96S53 571 aa11.47□□□□□ -0.57
RNF38-209ENST00000491349 PHLPP1O60346 1717 aa11.46□□□□□ -0.58
RNF38-209ENST00000491349 ATP7BP35670 1465 aa11.45□□□□□ -0.58
RNF38-209ENST00000491349 BRINP3Q76B58 766 aa11.45□□□□□ -0.58
RNF38-209ENST00000491349 TOPAZ1Q8N9V7 1692 aa11.45□□□□□ -0.58
RNF38-209ENST00000491349 HAX1O00165 279 aa11.44□□□□□ -0.58
RNF38-209ENST00000491349 PMFBP1Q8TBY8 1022 aa11.44□□□□□ -0.58
RNF38-209ENST00000491349 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
RNF38-209ENST00000491349 USP32Q8NFA0 1604 aa11.44□□□□□ -0.58
RNF38-209ENST00000491349 BRD4O60885 1362 aaPredicted RBP11.43□□□□□ -0.58
RNF38-209ENST00000491349 DISP3Q9P2K9 1392 aa11.43□□□□□ -0.58
RNF38-209ENST00000491349 NHSL1Q5SYE7 1610 aa11.43□□□□□ -0.58
RNF38-209ENST00000491349 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
RNF38-209ENST00000491349 FOXO3O43524 673 aa11.43□□□□□ -0.58
RNF38-209ENST00000491349 LRRC59Q96AG4 307 aaKnown RBP11.43□□□□□ -0.58
RNF38-209ENST00000491349 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
RNF38-209ENST00000491349 ACEP12821 1306 aa11.42□□□□□ -0.58
RNF38-209ENST00000491349 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
RNF38-209ENST00000491349 PRKAR2AP13861 404 aaKnown RBP11.42□□□□□ -0.58
RNF38-209ENST00000491349 KRT28Q7Z3Y7 464 aa11.42□□□□□ -0.58
RNF38-209ENST00000491349 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
RNF38-209ENST00000491349 PRR36Q9H6K5 1346 aa11.41□□□□□ -0.58
RNF38-209ENST00000491349 LMOD2Q6P5Q4 547 aa11.41□□□□□ -0.58
RNF38-209ENST00000491349 AKAP12Q02952 1782 aa11.41□□□□□ -0.58
RNF38-209ENST00000491349 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
RNF38-209ENST00000491349 HAP1P54257 671 aaPredicted RBP11.4□□□□□ -0.58
RNF38-209ENST00000491349 POLR3AO14802 1390 aaPredicted RBP11.4□□□□□ -0.59
RNF38-209ENST00000491349 ARHGEF10O15013 1369 aa11.39□□□□□ -0.59
RNF38-209ENST00000491349 ANKRD36BQ8N2N9 1353 aa11.39□□□□□ -0.59
RNF38-209ENST00000491349 TTC21AQ8NDW8 1320 aa11.38□□□□□ -0.59
RNF38-209ENST00000491349 SLC12A5Q9H2X9 1139 aa11.38□□□□□ -0.59
RNF38-209ENST00000491349 SBNO1A3KN83 1393 aa11.38□□□□□ -0.59
RNF38-209ENST00000491349 CCDC7Q96M83 1385 aa11.38□□□□□ -0.59
RNF38-209ENST00000491349 SOS2Q07890 1332 aaPredicted RBP11.37□□□□□ -0.59
RNF38-209ENST00000491349 KIF7Q2M1P5 1343 aa11.37□□□□□ -0.59
RNF38-209ENST00000491349 ZNF316A6NFI3 1004 aaPredicted RBP11.37□□□□□ -0.59
RNF38-209ENST00000491349 XPCQ01831 940 aaPredicted RBP11.37□□□□□ -0.59
RNF38-209ENST00000491349 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
RNF38-209ENST00000491349 JCADQ9P266 1359 aa11.37□□□□□ -0.59
RNF38-209ENST00000491349 MON2Q7Z3U7 1717 aa11.37□□□□□ -0.59
RNF38-209ENST00000491349 USP6P35125 1406 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 EDC4Q6P2E9 1401 aaKnown RBP11.36□□□□□ -0.59
RNF38-209ENST00000491349 HSPA1LP34931 641 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 EVX2Q03828 476 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 KNSTRNQ9Y448 316 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 MYOM1P52179 1685 aa11.36□□□□□ -0.59
RNF38-209ENST00000491349 COL16A1Q07092 1604 aaPredicted RBP11.35□□□□□ -0.59
RNF38-209ENST00000491349 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
RNF38-209ENST00000491349 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
RNF38-209ENST00000491349 PXDNQ92626 1479 aa11.35□□□□□ -0.59
RNF38-209ENST00000491349 CPSF1Q10570 1443 aaKnown RBP11.35□□□□□ -0.59
RNF38-209ENST00000491349 CGNL1Q0VF96 1302 aa11.35□□□□□ -0.59
RNF38-209ENST00000491349 SHPRHQ149N8 1683 aa11.34□□□□□ -0.59
RNF38-209ENST00000491349 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.59
RNF38-209ENST00000491349 SPATA31A6Q5VVP1 1343 aa11.34□□□□□ -0.59
RNF38-209ENST00000491349 SPATA31A3Q5VYP0 1347 aa11.34□□□□□ -0.59
RNF38-209ENST00000491349 WASHC2AQ641Q2 1341 aa11.34□□□□□ -0.59
RNF38-209ENST00000491349 KIF20BQ96Q89 1820 aa11.33□□□□□ -0.6
RNF38-209ENST00000491349 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
RNF38-209ENST00000491349 MEX3CQ5U5Q3 659 aaKnown RBP11.33□□□□□ -0.6
RNF38-209ENST00000491349 PANK3Q9H999 370 aa11.33□□□□□ -0.6
RNF38-209ENST00000491349 TTC21BQ7Z4L5 1316 aa11.33□□□□□ -0.6
RNF38-209ENST00000491349 NLRP6P59044 892 aa11.32□□□□□ -0.6
RNF38-209ENST00000491349 COG3Q96JB2 828 aa11.32□□□□□ -0.6
RNF38-209ENST00000491349 ALS2Q96Q42 1657 aa11.31□□□□□ -0.6
RNF38-209ENST00000491349 C11orf95C9JLR9 678 aaPredicted RBP11.31□□□□□ -0.6
RNF38-209ENST00000491349 PRR29P0C7W0 189 aa11.31□□□□□ -0.6
RNF38-209ENST00000491349 KCNH5Q8NCM2 988 aa11.31□□□□□ -0.6
RNF38-209ENST00000491349 NSD3Q9BZ95 1437 aa11.31□□□□□ -0.6
RNF38-209ENST00000491349 NRKQ7Z2Y5 1582 aa11.31□□□□□ -0.6
RNF38-209ENST00000491349 NSD2O96028 1365 aa11.3□□□□□ -0.6
RNF38-209ENST00000491349 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
RNF38-209ENST00000491349 CHADLQ6NUI6 762 aa11.3□□□□□ -0.6
RNF38-209ENST00000491349 ILDR1Q86SU0 546 aaPredicted RBP11.3□□□□□ -0.6
RNF38-209ENST00000491349 COL22A1Q8NFW1 1626 aaPredicted RBP11.3□□□□□ -0.6
RNF38-209ENST00000491349 CD163L1Q9NR16 1453 aa11.3□□□□□ -0.6
RNF38-209ENST00000491349 PNPLA6Q8IY17 1366 aa11.29□□□□□ -0.6
RNF38-209ENST00000491349 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
RNF38-209ENST00000491349 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
RNF38-209ENST00000491349 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
RNF38-209ENST00000491349 C19orf67A6NJJ6 358 aa11.28□□□□□ -0.6
RNF38-209ENST00000491349 NUTM2GQ5VZR2 741 aa11.28□□□□□ -0.6
RNF38-209ENST00000491349 PIK3C2AO00443 1686 aa11.27□□□□□ -0.6
RNF38-209ENST00000491349 ANKRD26Q9UPS8 1709 aa11.27□□□□□ -0.61
RNF38-209ENST00000491349 DDX10Q13206 875 aaKnown RBP11.27□□□□□ -0.61
RNF38-209ENST00000491349 MED1Q15648 1581 aaPredicted RBP11.27□□□□□ -0.61
RNF38-209ENST00000491349 SSH2Q76I76 1423 aa11.26□□□□□ -0.61
RNF38-209ENST00000491349 MARF1Q9Y4F3 1742 aaKnown RBP11.26□□□□□ -0.61
RNF38-209ENST00000491349 MORC1Q86VD1 984 aa11.26□□□□□ -0.61
RNF38-209ENST00000491349 NME9Q86XW9 330 aa11.26□□□□□ -0.61
RNF38-209ENST00000491349 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
RNF38-209ENST00000491349 PHRF1Q9P1Y6 1649 aaKnown RBP11.25□□□□□ -0.61
RNF38-209ENST00000491349 USP54Q70EL1 1684 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms