RNA–Protein interactions for RNA: ENST00000491282.5

SOX2-OT-212, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 882 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-212ENST00000491282 COL22A1Q8NFW1 1626 aaPredicted RBP16.29■□□□□ 0.2
SOX2-OT-212ENST00000491282 RXRBP28702 533 aa16.28■□□□□ 0.2
SOX2-OT-212ENST00000491282 ACEP12821 1306 aa16.27■□□□□ 0.2
SOX2-OT-212ENST00000491282 PLEKHG3A1L390 1219 aa16.27■□□□□ 0.2
SOX2-OT-212ENST00000491282 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-212ENST00000491282 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
SOX2-OT-212ENST00000491282 EVC2Q86UK5 1308 aa16.25■□□□□ 0.19
SOX2-OT-212ENST00000491282 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
SOX2-OT-212ENST00000491282 NUTM2GQ5VZR2 741 aa16.24■□□□□ 0.19
SOX2-OT-212ENST00000491282 SAMD1Q6SPF0 538 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-212ENST00000491282 ATF5Q9Y2D1 282 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-212ENST00000491282 QRICH2Q9H0J4 1663 aa16.24■□□□□ 0.19
SOX2-OT-212ENST00000491282 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
SOX2-OT-212ENST00000491282 PPIP5K1Q6PFW1 1433 aa16.23■□□□□ 0.19
SOX2-OT-212ENST00000491282 RBM6P78332 1123 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-212ENST00000491282 TRPC5Q9UL62 973 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-212ENST00000491282 POLR3AO14802 1390 aaPredicted RBP16.23■□□□□ 0.19
SOX2-OT-212ENST00000491282 TRPM3Q9HCF6 1732 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-212ENST00000491282 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.19
SOX2-OT-212ENST00000491282 FAM83GA6ND36 823 aa16.2■□□□□ 0.18
SOX2-OT-212ENST00000491282 CCER1Q8TC90 406 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-212ENST00000491282 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
SOX2-OT-212ENST00000491282 UNC5CLQ8IV45 518 aa16.19■□□□□ 0.18
SOX2-OT-212ENST00000491282 ABTB2Q8N961 1025 aa16.19■□□□□ 0.18
SOX2-OT-212ENST00000491282 TOPAZ1Q8N9V7 1692 aa16.18■□□□□ 0.18
SOX2-OT-212ENST00000491282 ATRNO75882 1429 aa16.18■□□□□ 0.18
SOX2-OT-212ENST00000491282 CLSPNQ9HAW4 1339 aa16.18■□□□□ 0.18
SOX2-OT-212ENST00000491282 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
SOX2-OT-212ENST00000491282 ALS2Q96Q42 1657 aa16.17■□□□□ 0.18
SOX2-OT-212ENST00000491282 SLIT2O94813 1529 aa16.16■□□□□ 0.18
SOX2-OT-212ENST00000491282 GJD4Q96KN9 370 aaPredicted RBP16.16■□□□□ 0.18
SOX2-OT-212ENST00000491282 TIMELESSQ9UNS1 1208 aa16.16■□□□□ 0.18
SOX2-OT-212ENST00000491282 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
SOX2-OT-212ENST00000491282 RGS12O14924 1447 aa16.15■□□□□ 0.18
SOX2-OT-212ENST00000491282 MARF1Q9Y4F3 1742 aaKnown RBP16.14■□□□□ 0.17
SOX2-OT-212ENST00000491282 ZC3H6P61129 1189 aaKnown RBP16.14■□□□□ 0.17
SOX2-OT-212ENST00000491282 TESK2Q96S53 571 aa16.14■□□□□ 0.17
SOX2-OT-212ENST00000491282 PRDM11Q9NQV5 511 aa16.14■□□□□ 0.17
SOX2-OT-212ENST00000491282 BTG4Q9NY30 223 aa16.14■□□□□ 0.17
SOX2-OT-212ENST00000491282 CDK12Q9NYV4 1490 aaPredicted RBP16.14■□□□□ 0.17
SOX2-OT-212ENST00000491282 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
SOX2-OT-212ENST00000491282 USP6P35125 1406 aa16.13■□□□□ 0.17
SOX2-OT-212ENST00000491282 CHRNA2Q15822 529 aa16.13■□□□□ 0.17
SOX2-OT-212ENST00000491282 TMC1Q8TDI8 760 aa16.13■□□□□ 0.17
SOX2-OT-212ENST00000491282 CCDC9Q9Y3X0 531 aaKnown RBP16.13■□□□□ 0.17
SOX2-OT-212ENST00000491282 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
SOX2-OT-212ENST00000491282 VPS72Q15906 364 aa16.12■□□□□ 0.17
SOX2-OT-212ENST00000491282 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
SOX2-OT-212ENST00000491282 KIAA0232Q92628 1395 aa16.12■□□□□ 0.17
SOX2-OT-212ENST00000491282 NLRP6P59044 892 aa16.11■□□□□ 0.17
SOX2-OT-212ENST00000491282 ZNF692Q9BU19 519 aaPredicted RBP16.11■□□□□ 0.17
SOX2-OT-212ENST00000491282 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
SOX2-OT-212ENST00000491282 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
SOX2-OT-212ENST00000491282 TTC21BQ7Z4L5 1316 aa16.1■□□□□ 0.17
SOX2-OT-212ENST00000491282 BRD4O60885 1362 aaPredicted RBP16.1■□□□□ 0.17
SOX2-OT-212ENST00000491282 USP47Q96K76 1375 aa16.1■□□□□ 0.17
SOX2-OT-212ENST00000491282 SSH2Q76I76 1423 aa16.1■□□□□ 0.17
SOX2-OT-212ENST00000491282 USP19O94966 1318 aa16.09■□□□□ 0.17
SOX2-OT-212ENST00000491282 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
SOX2-OT-212ENST00000491282 ZBTB7CA1YPR0 619 aa16.08■□□□□ 0.16
SOX2-OT-212ENST00000491282 GCP02774 474 aa16.08■□□□□ 0.16
SOX2-OT-212ENST00000491282 KTN1Q86UP2 1357 aaKnown RBP16.08■□□□□ 0.16
SOX2-OT-212ENST00000491282 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.07■□□□□ 0.16
SOX2-OT-212ENST00000491282 STRN4Q9NRL3 753 aa16.07■□□□□ 0.16
SOX2-OT-212ENST00000491282 PLCH1Q4KWH8 1693 aa16.07■□□□□ 0.16
SOX2-OT-212ENST00000491282 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
SOX2-OT-212ENST00000491282 GLI3P10071 1580 aa16.06■□□□□ 0.16
SOX2-OT-212ENST00000491282 PUS7Q96PZ0 661 aaKnown RBP16.06■□□□□ 0.16
SOX2-OT-212ENST00000491282 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
SOX2-OT-212ENST00000491282 SOX12O15370 315 aa16.05■□□□□ 0.16
SOX2-OT-212ENST00000491282 HDGFL2Q7Z4V5 671 aaPredicted RBP16.05■□□□□ 0.16
SOX2-OT-212ENST00000491282 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
SOX2-OT-212ENST00000491282 COL14A1Q05707 1796 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-212ENST00000491282 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.05■□□□□ 0.16
SOX2-OT-212ENST00000491282 CD163L1Q9NR16 1453 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 TTC21AQ8NDW8 1320 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 EVA1CP58658 441 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 TMF1P82094 1093 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 NME9Q86XW9 330 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 TERF2IPQ9NYB0 399 aa16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 PHRF1Q9P1Y6 1649 aaKnown RBP16.04■□□□□ 0.16
SOX2-OT-212ENST00000491282 CPDO75976 1380 aa16.03■□□□□ 0.16
SOX2-OT-212ENST00000491282 NWD2Q9ULI1 1742 aa16.03■□□□□ 0.16
SOX2-OT-212ENST00000491282 A0A0G2JS52 829 aa16.03■□□□□ 0.16
SOX2-OT-212ENST00000491282 ONECUT3O60422 494 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-212ENST00000491282 MYT1Q01538 1121 aa16.03■□□□□ 0.16
SOX2-OT-212ENST00000491282 NRKQ7Z2Y5 1582 aa16.03■□□□□ 0.16
SOX2-OT-212ENST00000491282 SPATA31A5Q5VU36 1347 aa16.02■□□□□ 0.16
SOX2-OT-212ENST00000491282 SPATA31A7Q8IWB4 1347 aa16.02■□□□□ 0.16
SOX2-OT-212ENST00000491282 A0A1W2PP64 1363 aa16.01■□□□□ 0.15
SOX2-OT-212ENST00000491282 USP35Q9P2H5 1018 aa16.01■□□□□ 0.15
SOX2-OT-212ENST00000491282 NRAPQ86VF7 1730 aa16■□□□□ 0.15
SOX2-OT-212ENST00000491282 PIK3C2AO00443 1686 aa16■□□□□ 0.15
SOX2-OT-212ENST00000491282 FKBP8Q14318 412 aa16■□□□□ 0.15
SOX2-OT-212ENST00000491282 LARP1Q6PKG0 1096 aaKnown RBP16■□□□□ 0.15
SOX2-OT-212ENST00000491282 AKAP12Q02952 1782 aa16■□□□□ 0.15
SOX2-OT-212ENST00000491282 SPATA31A1Q5TZJ5 1347 aa15.99■□□□□ 0.15
SOX2-OT-212ENST00000491282 CAMTA1Q9Y6Y1 1673 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms