RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 PSME1Q06323 249 aa12.48□□□□□ -0.41
PCOLCE-209ENST00000490909 RREB1Q92766 1687 aa12.48□□□□□ -0.41
PCOLCE-209ENST00000490909 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
PCOLCE-209ENST00000490909 LMOD2Q6P5Q4 547 aa12.47□□□□□ -0.41
PCOLCE-209ENST00000490909 POGKQ9P215 609 aa12.47□□□□□ -0.41
PCOLCE-209ENST00000490909 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
PCOLCE-209ENST00000490909 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.41
PCOLCE-209ENST00000490909 WNK3Q9BYP7 1800 aa12.46□□□□□ -0.42
PCOLCE-209ENST00000490909 KRT27Q7Z3Y8 459 aa12.45□□□□□ -0.42
PCOLCE-209ENST00000490909 BTG4Q9NY30 223 aa12.45□□□□□ -0.42
PCOLCE-209ENST00000490909 DISP2A7MBM2 1401 aa12.45□□□□□ -0.42
PCOLCE-209ENST00000490909 GPRASP1Q5JY77 1395 aa12.44□□□□□ -0.42
PCOLCE-209ENST00000490909 WASLO00401 505 aaPredicted RBP12.44□□□□□ -0.42
PCOLCE-209ENST00000490909 FAM98CQ17RN3 349 aaKnown RBP12.44□□□□□ -0.42
PCOLCE-209ENST00000490909 CCDC9Q9Y3X0 531 aaKnown RBP12.44□□□□□ -0.42
PCOLCE-209ENST00000490909 SPATA31A5Q5VU36 1347 aa12.43□□□□□ -0.42
PCOLCE-209ENST00000490909 SPATA31A7Q8IWB4 1347 aa12.43□□□□□ -0.42
PCOLCE-209ENST00000490909 DCAF11Q8TEB1 546 aa12.43□□□□□ -0.42
PCOLCE-209ENST00000490909 POLR3AO14802 1390 aaPredicted RBP12.43□□□□□ -0.42
PCOLCE-209ENST00000490909 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
PCOLCE-209ENST00000490909 PARP4Q9UKK3 1724 aaKnown RBP12.42□□□□□ -0.42
PCOLCE-209ENST00000490909 FAM182BQ5T319 152 aa12.42□□□□□ -0.42
PCOLCE-209ENST00000490909 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
PCOLCE-209ENST00000490909 PIK3C2AO00443 1686 aa12.42□□□□□ -0.42
PCOLCE-209ENST00000490909 CAMTA1Q9Y6Y1 1673 aa12.42□□□□□ -0.42
PCOLCE-209ENST00000490909 LRRC37A3O60309 1634 aa12.41□□□□□ -0.42
PCOLCE-209ENST00000490909 PEAK1Q9H792 1746 aa12.41□□□□□ -0.42
PCOLCE-209ENST00000490909 SSH2Q76I76 1423 aa12.4□□□□□ -0.42
PCOLCE-209ENST00000490909 A0A0G2JS52 829 aa12.4□□□□□ -0.42
PCOLCE-209ENST00000490909 MYT1Q01538 1121 aa12.4□□□□□ -0.42
PCOLCE-209ENST00000490909 PSDA5PKW4 1024 aaPredicted RBP12.39□□□□□ -0.43
PCOLCE-209ENST00000490909 PRDM11Q9NQV5 511 aa12.39□□□□□ -0.43
PCOLCE-209ENST00000490909 TRPM1Q7Z4N2 1603 aa12.39□□□□□ -0.43
PCOLCE-209ENST00000490909 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 COL18A1P39060 1754 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 SLIT3O75094 1523 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 CHRNA2Q15822 529 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 NGDNQ8NEJ9 315 aaKnown RBP12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 NUDT16Q96DE0 195 aaKnown RBP12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 AKAP12Q02952 1782 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
PCOLCE-209ENST00000490909 USP19O94966 1318 aa12.37□□□□□ -0.43
PCOLCE-209ENST00000490909 PAK3O75914 559 aaPredicted RBP12.37□□□□□ -0.43
PCOLCE-209ENST00000490909 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
PCOLCE-209ENST00000490909 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
PCOLCE-209ENST00000490909 HRCP23327 699 aa12.36□□□□□ -0.43
PCOLCE-209ENST00000490909 BAG6P46379 1132 aa12.36□□□□□ -0.43
PCOLCE-209ENST00000490909 EN1Q05925 392 aaPredicted RBP12.36□□□□□ -0.43
PCOLCE-209ENST00000490909 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
PCOLCE-209ENST00000490909 ACEP12821 1306 aa12.36□□□□□ -0.43
PCOLCE-209ENST00000490909 RGPD5Q99666 1765 aa12.35□□□□□ -0.43
PCOLCE-209ENST00000490909 CPDO75976 1380 aa12.35□□□□□ -0.43
PCOLCE-209ENST00000490909 NUTM2GQ5VZR2 741 aa12.35□□□□□ -0.43
PCOLCE-209ENST00000490909 CDK19Q9BWU1 502 aa12.34□□□□□ -0.43
PCOLCE-209ENST00000490909 ZC3H6P61129 1189 aaKnown RBP12.33□□□□□ -0.44
PCOLCE-209ENST00000490909 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
PCOLCE-209ENST00000490909 STAC3Q96MF2 364 aa12.33□□□□□ -0.44
PCOLCE-209ENST00000490909 STRN4Q9NRL3 753 aa12.33□□□□□ -0.44
PCOLCE-209ENST00000490909 MON2Q7Z3U7 1717 aa12.33□□□□□ -0.44
PCOLCE-209ENST00000490909 USP6P35125 1406 aa12.32□□□□□ -0.44
PCOLCE-209ENST00000490909 EZH2Q15910 746 aaKnown RBP12.32□□□□□ -0.44
PCOLCE-209ENST00000490909 CASZ1Q86V15 1759 aa12.32□□□□□ -0.44
PCOLCE-209ENST00000490909 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
PCOLCE-209ENST00000490909 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
PCOLCE-209ENST00000490909 R3HDM1Q15032 1099 aaKnown RBP12.31□□□□□ -0.44
PCOLCE-209ENST00000490909 NBPF8Q3BBV2 869 aa12.31□□□□□ -0.44
PCOLCE-209ENST00000490909 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 LARP1Q6PKG0 1096 aaKnown RBP12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 CAMKK2Q96RR4 588 aa12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 USP35Q9P2H5 1018 aa12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 CCDC61Q9Y6R9 512 aa12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 NFAT5O94916 1531 aa12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 PARD3Q8TEW0 1356 aa12.3□□□□□ -0.44
PCOLCE-209ENST00000490909 TRIM37O94972 964 aa12.29□□□□□ -0.44
PCOLCE-209ENST00000490909 BARGINQ6ZT62 677 aa12.29□□□□□ -0.44
PCOLCE-209ENST00000490909 CENPJQ9HC77 1338 aaPredicted RBP12.29□□□□□ -0.44
PCOLCE-209ENST00000490909 CRB1P82279 1406 aa12.28□□□□□ -0.44
PCOLCE-209ENST00000490909 CPSF1Q10570 1443 aaKnown RBP12.28□□□□□ -0.44
PCOLCE-209ENST00000490909 ABTB2Q8N961 1025 aa12.27□□□□□ -0.45
PCOLCE-209ENST00000490909 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
PCOLCE-209ENST00000490909 UTRNP46939 3433 aa12.27□□□□□ -0.45
PCOLCE-209ENST00000490909 LTN1O94822 1766 aa12.26□□□□□ -0.45
PCOLCE-209ENST00000490909 FAM196AQ6ZSG2 479 aa12.26□□□□□ -0.45
PCOLCE-209ENST00000490909 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
PCOLCE-209ENST00000490909 OVOS2A0A0J9YW53 1432 aa12.26□□□□□ -0.45
PCOLCE-209ENST00000490909 OVOS2Q6IE36 1432 aa12.26□□□□□ -0.45
PCOLCE-209ENST00000490909 GCP02774 474 aa12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 SRPK2P78362 688 aaKnown RBP12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 BRD4O60885 1362 aaPredicted RBP12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 AATKQ6ZMQ8 1374 aa12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 ABCC6O95255 1503 aa12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 MYOM1P52179 1685 aa12.25□□□□□ -0.45
PCOLCE-209ENST00000490909 APBA3O96018 575 aa12.24□□□□□ -0.45
PCOLCE-209ENST00000490909 NHSQ6T4R5 1651 aa12.24□□□□□ -0.45
PCOLCE-209ENST00000490909 PAPPAQ13219 1627 aa12.23□□□□□ -0.45
PCOLCE-209ENST00000490909 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
PCOLCE-209ENST00000490909 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms