RNA–Protein interactions for RNA: ENST00000490893.5

ZNF561-218, Transcript of zinc finger protein 561, humanhuman

TSL 3

Gene ZNF561, Length 728 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-218ENST00000490893 TMEM94Q12767 1356 aa10.07□□□□□ -0.8
ZNF561-218ENST00000490893 RALBP1Q15311 655 aa10.07□□□□□ -0.8
ZNF561-218ENST00000490893 CCDC61Q9Y6R9 512 aa10.07□□□□□ -0.8
ZNF561-218ENST00000490893 LRP5O75197 1615 aa10.07□□□□□ -0.8
ZNF561-218ENST00000490893 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
ZNF561-218ENST00000490893 PARD3Q8TEW0 1356 aa10.06□□□□□ -0.8
ZNF561-218ENST00000490893 CCER2I3L3R5 266 aa10.06□□□□□ -0.8
ZNF561-218ENST00000490893 NCBP3Q53F19 620 aaKnown RBP10.06□□□□□ -0.8
ZNF561-218ENST00000490893 MIER1Q8N108 512 aa10.06□□□□□ -0.8
ZNF561-218ENST00000490893 NUDT16Q96DE0 195 aaKnown RBP10.06□□□□□ -0.8
ZNF561-218ENST00000490893 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
ZNF561-218ENST00000490893 RGPD8O14715 1765 aaPredicted RBP10.06□□□□□ -0.8
ZNF561-218ENST00000490893 MYBBP1AQ9BQG0 1328 aaKnown RBP10.06□□□□□ -0.8
ZNF561-218ENST00000490893 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
ZNF561-218ENST00000490893 RGS12O14924 1447 aa10.05□□□□□ -0.8
ZNF561-218ENST00000490893 CPSF1Q10570 1443 aaKnown RBP10.05□□□□□ -0.8
ZNF561-218ENST00000490893 BRD4O60885 1362 aaPredicted RBP10.04□□□□□ -0.8
ZNF561-218ENST00000490893 SLC12A5Q9H2X9 1139 aa10.04□□□□□ -0.8
ZNF561-218ENST00000490893 USP6P35125 1406 aa10.04□□□□□ -0.8
ZNF561-218ENST00000490893 PRR36Q9H6K5 1346 aa10.04□□□□□ -0.8
ZNF561-218ENST00000490893 POLR3AO14802 1390 aaPredicted RBP10.03□□□□□ -0.8
ZNF561-218ENST00000490893 NUTM2BA6NNL0 878 aaPredicted RBP10.03□□□□□ -0.8
ZNF561-218ENST00000490893 NUTM2EB1AL46 878 aaPredicted RBP10.03□□□□□ -0.8
ZNF561-218ENST00000490893 ATF3P18847 181 aa10.03□□□□□ -0.8
ZNF561-218ENST00000490893 NUTM2AQ8IVF1 878 aaPredicted RBP10.03□□□□□ -0.8
ZNF561-218ENST00000490893 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
ZNF561-218ENST00000490893 CABP1Q9NZU7 370 aa10.03□□□□□ -0.8
ZNF561-218ENST00000490893 USP54Q70EL1 1684 aa10.02□□□□□ -0.8
ZNF561-218ENST00000490893 MST1RQ04912 1400 aa10.02□□□□□ -0.81
ZNF561-218ENST00000490893 PER1O15534 1290 aaPredicted RBP10.02□□□□□ -0.81
ZNF561-218ENST00000490893 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
ZNF561-218ENST00000490893 CC2D1BQ5T0F9 858 aaKnown RBP10.02□□□□□ -0.81
ZNF561-218ENST00000490893 CADPS2Q86UW7 1296 aa10.02□□□□□ -0.81
ZNF561-218ENST00000490893 NLRP13Q86W25 1043 aa10.02□□□□□ -0.81
ZNF561-218ENST00000490893 C19orf44Q9H6X5 657 aa10.02□□□□□ -0.81
ZNF561-218ENST00000490893 C1orf167Q5SNV9 1468 aa10.02□□□□□ -0.81
ZNF561-218ENST00000490893 PLEKHG3A1L390 1219 aa10.01□□□□□ -0.81
ZNF561-218ENST00000490893 NGDNQ8NEJ9 315 aaKnown RBP10.01□□□□□ -0.81
ZNF561-218ENST00000490893 TTC21AQ8NDW8 1320 aa10.01□□□□□ -0.81
ZNF561-218ENST00000490893 ROBO1Q9Y6N7 1651 aa10□□□□□ -0.81
ZNF561-218ENST00000490893 NUTM2FA1L443 756 aa10□□□□□ -0.81
ZNF561-218ENST00000490893 MEX3CQ5U5Q3 659 aaKnown RBP10□□□□□ -0.81
ZNF561-218ENST00000490893 PHF8Q9UPP1 1060 aa10□□□□□ -0.81
ZNF561-218ENST00000490893 ACEP12821 1306 aa10□□□□□ -0.81
ZNF561-218ENST00000490893 JCADQ9P266 1359 aa10□□□□□ -0.81
ZNF561-218ENST00000490893 CNGB1Q14028 1251 aaPredicted RBP9.99□□□□□ -0.81
ZNF561-218ENST00000490893 MORC1Q86VD1 984 aa9.99□□□□□ -0.81
ZNF561-218ENST00000490893 MRS2Q9HD23 443 aa9.99□□□□□ -0.81
ZNF561-218ENST00000490893 PIK3C2AO00443 1686 aa9.99□□□□□ -0.81
ZNF561-218ENST00000490893 CARD14Q9BXL6 1004 aa9.98□□□□□ -0.81
ZNF561-218ENST00000490893 TRPM3Q9HCF6 1732 aaPredicted RBP9.98□□□□□ -0.81
ZNF561-218ENST00000490893 OVOS2A0A0J9YW53 1432 aa9.98□□□□□ -0.81
ZNF561-218ENST00000490893 OVOS2Q6IE36 1432 aa9.98□□□□□ -0.81
ZNF561-218ENST00000490893 ESCO1Q5FWF5 840 aa9.97□□□□□ -0.81
ZNF561-218ENST00000490893 COG3Q96JB2 828 aa9.97□□□□□ -0.81
ZNF561-218ENST00000490893 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.96□□□□□ -0.82
ZNF561-218ENST00000490893 PMFBP1Q8TBY8 1022 aa9.96□□□□□ -0.82
ZNF561-218ENST00000490893 NPHP3Q7Z494 1330 aa9.96□□□□□ -0.82
ZNF561-218ENST00000490893 TTC21BQ7Z4L5 1316 aa9.96□□□□□ -0.82
ZNF561-218ENST00000490893 SSH2Q76I76 1423 aa9.96□□□□□ -0.82
ZNF561-218ENST00000490893 NHSL1Q5SYE7 1610 aa9.96□□□□□ -0.82
ZNF561-218ENST00000490893 SLC34A2O95436 690 aa9.95□□□□□ -0.82
ZNF561-218ENST00000490893 CFAP53Q96M91 514 aa9.95□□□□□ -0.82
ZNF561-218ENST00000490893 SMG6Q86US8 1419 aaKnown RBP9.95□□□□□ -0.82
ZNF561-218ENST00000490893 PHLPP1O60346 1717 aa9.94□□□□□ -0.82
ZNF561-218ENST00000490893 ALS2Q96Q42 1657 aa9.94□□□□□ -0.82
ZNF561-218ENST00000490893 USP31Q70CQ4 1352 aa9.94□□□□□ -0.82
ZNF561-218ENST00000490893 PPP2R1AP30153 589 aa9.94□□□□□ -0.82
ZNF561-218ENST00000490893 GGNBP2Q9H3C7 697 aa9.94□□□□□ -0.82
ZNF561-218ENST00000490893 TNS3Q68CZ2 1445 aa9.93□□□□□ -0.82
ZNF561-218ENST00000490893 AATKQ6ZMQ8 1374 aa9.93□□□□□ -0.82
ZNF561-218ENST00000490893 FYB1O15117 783 aa9.93□□□□□ -0.82
ZNF561-218ENST00000490893 PSME1Q06323 249 aa9.93□□□□□ -0.82
ZNF561-218ENST00000490893 MARF1Q9Y4F3 1742 aaKnown RBP9.93□□□□□ -0.82
ZNF561-218ENST00000490893 AHDC1Q5TGY3 1603 aaPredicted RBP9.93□□□□□ -0.82
ZNF561-218ENST00000490893 PXDNQ92626 1479 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 SBNO1A3KN83 1393 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 ARHGEF10O15013 1369 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 INSRP06213 1382 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
ZNF561-218ENST00000490893 NME9Q86XW9 330 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 SHPRHQ149N8 1683 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 UTRNP46939 3433 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 SLIT3O75094 1523 aa9.92□□□□□ -0.82
ZNF561-218ENST00000490893 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
ZNF561-218ENST00000490893 AFF2P51816 1311 aa9.91□□□□□ -0.82
ZNF561-218ENST00000490893 SPATA31A6Q5VVP1 1343 aa9.91□□□□□ -0.82
ZNF561-218ENST00000490893 PAK3O75914 559 aaPredicted RBP9.91□□□□□ -0.82
ZNF561-218ENST00000490893 PHRF1Q9P1Y6 1649 aaKnown RBP9.91□□□□□ -0.82
ZNF561-218ENST00000490893 MAP2P11137 1827 aaKnown RBP9.91□□□□□ -0.82
ZNF561-218ENST00000490893 TNNT2P45379 298 aaPredicted RBP9.9□□□□□ -0.82
ZNF561-218ENST00000490893 C1QTNF8P60827 252 aa9.9□□□□□ -0.82
ZNF561-218ENST00000490893 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
ZNF561-218ENST00000490893 ORAI2Q96SN7 254 aa9.9□□□□□ -0.82
ZNF561-218ENST00000490893 ABCC6O95255 1503 aa9.9□□□□□ -0.82
ZNF561-218ENST00000490893 LTN1O94822 1766 aa9.9□□□□□ -0.82
ZNF561-218ENST00000490893 COL16A1Q07092 1604 aaPredicted RBP9.89□□□□□ -0.83
ZNF561-218ENST00000490893 KIF24Q5T7B8 1368 aa9.89□□□□□ -0.83
ZNF561-218ENST00000490893 NFAT5O94916 1531 aa9.89□□□□□ -0.83
ZNF561-218ENST00000490893 PSDA5PKW4 1024 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms