RNA–Protein interactions for RNA: ENST00000490832.1

FNDC3B-211, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 772 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-211ENST00000490832 BRICD5Q6PL45 260 aa13.44□□□□□ -0.26
FNDC3B-211ENST00000490832 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
FNDC3B-211ENST00000490832 ERCC6L2Q5T890 1561 aa13.44□□□□□ -0.26
FNDC3B-211ENST00000490832 ADAMTS12P58397 1594 aa13.43□□□□□ -0.26
FNDC3B-211ENST00000490832 BANK1Q8NDB2 785 aa13.43□□□□□ -0.26
FNDC3B-211ENST00000490832 THAP11Q96EK4 314 aa13.43□□□□□ -0.26
FNDC3B-211ENST00000490832 GRIN2AQ12879 1464 aa13.42□□□□□ -0.26
FNDC3B-211ENST00000490832 IL21Q9HBE4 155 aa13.42□□□□□ -0.26
FNDC3B-211ENST00000490832 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
FNDC3B-211ENST00000490832 ZPR1O75312 459 aa13.41□□□□□ -0.26
FNDC3B-211ENST00000490832 HELBQ8NG08 1087 aaPredicted RBP13.41□□□□□ -0.26
FNDC3B-211ENST00000490832 USB1Q9BQ65 265 aaKnown RBP13.41□□□□□ -0.26
FNDC3B-211ENST00000490832 CFAP99D6REC4 459 aa13.4□□□□□ -0.26
FNDC3B-211ENST00000490832 MMRN1Q13201 1228 aa13.4□□□□□ -0.26
FNDC3B-211ENST00000490832 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
FNDC3B-211ENST00000490832 PRR7Q8TB68 274 aa13.4□□□□□ -0.26
FNDC3B-211ENST00000490832 AP1G2O75843 785 aa13.39□□□□□ -0.27
FNDC3B-211ENST00000490832 MCM6Q14566 821 aa13.38□□□□□ -0.27
FNDC3B-211ENST00000490832 TSC1Q92574 1164 aa13.38□□□□□ -0.27
FNDC3B-211ENST00000490832 SPSB2Q99619 263 aa13.38□□□□□ -0.27
FNDC3B-211ENST00000490832 DESI1Q6ICB0 168 aa13.37□□□□□ -0.27
FNDC3B-211ENST00000490832 C14orf37Q86TY3 774 aa13.37□□□□□ -0.27
FNDC3B-211ENST00000490832 MSS51Q4VC12 460 aa13.36□□□□□ -0.27
FNDC3B-211ENST00000490832 FHAD1B1AJZ9 1412 aa13.36□□□□□ -0.27
FNDC3B-211ENST00000490832 NUP160Q12769 1436 aa13.36□□□□□ -0.27
FNDC3B-211ENST00000490832 TLL1O43897 1013 aa13.35□□□□□ -0.27
FNDC3B-211ENST00000490832 ADH1BP00325 375 aa13.35□□□□□ -0.27
FNDC3B-211ENST00000490832 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
FNDC3B-211ENST00000490832 SOCS7O14512 581 aa13.33□□□□□ -0.28
FNDC3B-211ENST00000490832 ZNF516Q92618 1163 aa13.33□□□□□ -0.28
FNDC3B-211ENST00000490832 TIMELESSQ9UNS1 1208 aa13.33□□□□□ -0.28
FNDC3B-211ENST00000490832 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
FNDC3B-211ENST00000490832 ITGBL1O95965 494 aaPredicted RBP13.32□□□□□ -0.28
FNDC3B-211ENST00000490832 CTDSPL2Q05D32 466 aa13.32□□□□□ -0.28
FNDC3B-211ENST00000490832 JUNDP17535 347 aa13.31□□□□□ -0.28
FNDC3B-211ENST00000490832 FAM160A2Q8N612 972 aaPredicted RBP13.31□□□□□ -0.28
FNDC3B-211ENST00000490832 SNRKQ9NRH2 765 aa13.31□□□□□ -0.28
FNDC3B-211ENST00000490832 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
FNDC3B-211ENST00000490832 APBB1O00213 710 aa13.3□□□□□ -0.28
FNDC3B-211ENST00000490832 KCNC4Q03721 635 aa13.3□□□□□ -0.28
FNDC3B-211ENST00000490832 MTMR14Q8NCE2 650 aa13.28□□□□□ -0.28
FNDC3B-211ENST00000490832 DXOO77932 396 aaKnown RBP13.27□□□□□ -0.29
FNDC3B-211ENST00000490832 UBTFP17480 764 aaKnown RBP13.27□□□□□ -0.29
FNDC3B-211ENST00000490832 MMP16P51512 607 aa13.27□□□□□ -0.29
FNDC3B-211ENST00000490832 LYPD8Q6UX82 237 aa13.27□□□□□ -0.29
FNDC3B-211ENST00000490832 SLC6A16Q9GZN6 736 aa13.27□□□□□ -0.29
FNDC3B-211ENST00000490832 PRG4Q92954 1404 aaPredicted RBP13.27□□□□□ -0.29
FNDC3B-211ENST00000490832 PTPRNQ16849 979 aa13.26□□□□□ -0.29
FNDC3B-211ENST00000490832 PRDM9Q9NQV7 894 aa13.26□□□□□ -0.29
FNDC3B-211ENST00000490832 LRRN4Q8WUT4 740 aa13.25□□□□□ -0.29
FNDC3B-211ENST00000490832 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
FNDC3B-211ENST00000490832 NKX2-3Q8TAU0 364 aa13.24□□□□□ -0.29
FNDC3B-211ENST00000490832 RUSC2Q8N2Y8 1516 aa13.23□□□□□ -0.29
FNDC3B-211ENST00000490832 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
FNDC3B-211ENST00000490832 HMX1Q9NP08 348 aaPredicted RBP13.23□□□□□ -0.29
FNDC3B-211ENST00000490832 GJD4Q96KN9 370 aaPredicted RBP13.21□□□□□ -0.29
FNDC3B-211ENST00000490832 RAD21O60216 631 aa13.2□□□□□ -0.3
FNDC3B-211ENST00000490832 S1PR4O95977 384 aa13.2□□□□□ -0.3
FNDC3B-211ENST00000490832 CCNYL3P0C7X3 344 aa13.2□□□□□ -0.3
FNDC3B-211ENST00000490832 NUDT12Q9BQG2 462 aa13.2□□□□□ -0.3
FNDC3B-211ENST00000490832 ZMYND15Q9H091 742 aa13.2□□□□□ -0.3
FNDC3B-211ENST00000490832 IGF1RP08069 1367 aa13.2□□□□□ -0.3
FNDC3B-211ENST00000490832 NDUFB9Q9Y6M9 179 aa13.19□□□□□ -0.3
FNDC3B-211ENST00000490832 F12P00748 615 aaPredicted RBP13.18□□□□□ -0.3
FNDC3B-211ENST00000490832 TRIM34Q9BYJ4 488 aa13.18□□□□□ -0.3
FNDC3B-211ENST00000490832 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
FNDC3B-211ENST00000490832 KIF27Q86VH2 1401 aa13.18□□□□□ -0.3
FNDC3B-211ENST00000490832 KIF13AQ9H1H9 1805 aa13.16□□□□□ -0.3
FNDC3B-211ENST00000490832 A6NJR5 290 aa13.16□□□□□ -0.3
FNDC3B-211ENST00000490832 GGCXP38435 758 aa13.16□□□□□ -0.3
FNDC3B-211ENST00000490832 NR6A1Q15406 480 aa13.16□□□□□ -0.3
FNDC3B-211ENST00000490832 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
FNDC3B-211ENST00000490832 TTBK1Q5TCY1 1321 aaPredicted RBP13.15□□□□□ -0.3
FNDC3B-211ENST00000490832 POM121Q96HA1 1249 aa13.15□□□□□ -0.3
FNDC3B-211ENST00000490832 EVA1BQ9NVM1 165 aa13.15□□□□□ -0.3
FNDC3B-211ENST00000490832 CUL7Q14999 1698 aa13.15□□□□□ -0.31
FNDC3B-211ENST00000490832 CTHP32929 405 aa13.14□□□□□ -0.31
FNDC3B-211ENST00000490832 KCNH2Q12809 1159 aa13.14□□□□□ -0.31
FNDC3B-211ENST00000490832 IFFO2Q5TF58 517 aa13.14□□□□□ -0.31
FNDC3B-211ENST00000490832 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
FNDC3B-211ENST00000490832 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
FNDC3B-211ENST00000490832 KIAA0586Q9BVV6 1533 aa13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 GDPD2Q9HCC8 539 aa13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 TBC1D2BQ9UPU7 963 aa13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 FCF1Q9Y324 198 aaKnown RBP13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 ADCY10Q96PN6 1610 aa13.13□□□□□ -0.31
FNDC3B-211ENST00000490832 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
FNDC3B-211ENST00000490832 CARMIL1Q5VZK9 1371 aa13.1□□□□□ -0.31
FNDC3B-211ENST00000490832 ABL2P42684 1182 aa13.1□□□□□ -0.31
FNDC3B-211ENST00000490832 RNF223E7ERA6 249 aa13.09□□□□□ -0.31
FNDC3B-211ENST00000490832 FAM69CQ0P6D2 419 aa13.09□□□□□ -0.31
FNDC3B-211ENST00000490832 PPP1R18Q6NYC8 613 aa13.09□□□□□ -0.31
FNDC3B-211ENST00000490832 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
FNDC3B-211ENST00000490832 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
FNDC3B-211ENST00000490832 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.09□□□□□ -0.31
FNDC3B-211ENST00000490832 ARMC2Q8NEN0 867 aa13.08□□□□□ -0.32
FNDC3B-211ENST00000490832 FKBPLQ9UIM3 349 aa13.08□□□□□ -0.32
FNDC3B-211ENST00000490832 ZC3H4Q9UPT8 1303 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms