RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 ALS2Q96Q42 1657 aa28.43■■■□□ 2.14
SREBF1-216ENST00000490796 ZRANB1Q9UGI0 708 aa28.43■■■□□ 2.14
SREBF1-216ENST00000490796 CCDC61Q9Y6R9 512 aa28.43■■■□□ 2.14
SREBF1-216ENST00000490796 SF3B2Q13435 895 aaKnown RBP28.42■■■□□ 2.14
SREBF1-216ENST00000490796 PRDM11Q9NQV5 511 aa28.42■■■□□ 2.14
SREBF1-216ENST00000490796 EP400Q96L91 3159 aa28.42■■■□□ 2.14
SREBF1-216ENST00000490796 SRPK2P78362 688 aaKnown RBP28.4■■■□□ 2.14
SREBF1-216ENST00000490796 KRT27Q7Z3Y8 459 aa28.4■■■□□ 2.14
SREBF1-216ENST00000490796 ONECUT3O60422 494 aaPredicted RBP28.39■■■□□ 2.14
SREBF1-216ENST00000490796 ACEP12821 1306 aa28.39■■■□□ 2.13
SREBF1-216ENST00000490796 CENPJQ9HC77 1338 aaPredicted RBP28.39■■■□□ 2.13
SREBF1-216ENST00000490796 BLMP54132 1417 aaPredicted RBP28.38■■■□□ 2.13
SREBF1-216ENST00000490796 COL14A1Q05707 1796 aaKnown RBP28.38■■■□□ 2.13
SREBF1-216ENST00000490796 FAM98CQ17RN3 349 aaKnown RBP28.38■■■□□ 2.13
SREBF1-216ENST00000490796 NBPF8Q3BBV2 869 aa28.37■■■□□ 2.13
SREBF1-216ENST00000490796 NUTM2GQ5VZR2 741 aa28.36■■■□□ 2.13
SREBF1-216ENST00000490796 BRWD3Q6RI45 1802 aa28.35■■■□□ 2.13
SREBF1-216ENST00000490796 PLEKHG3A1L390 1219 aa28.35■■■□□ 2.13
SREBF1-216ENST00000490796 L3MBTL2Q969R5 705 aa28.35■■■□□ 2.13
SREBF1-216ENST00000490796 POLR3AO14802 1390 aaPredicted RBP28.35■■■□□ 2.13
SREBF1-216ENST00000490796 ZC3H6P61129 1189 aaKnown RBP28.32■■■□□ 2.12
SREBF1-216ENST00000490796 NEUROD1Q13562 356 aa28.32■■■□□ 2.12
SREBF1-216ENST00000490796 ABTB2Q8N961 1025 aa28.32■■■□□ 2.12
SREBF1-216ENST00000490796 KIAA0232Q92628 1395 aa28.32■■■□□ 2.12
SREBF1-216ENST00000490796 CABP2Q9NPB3 220 aa28.31■■■□□ 2.12
SREBF1-216ENST00000490796 NRAPQ86VF7 1730 aa28.31■■■□□ 2.12
SREBF1-216ENST00000490796 SPATA31A5Q5VU36 1347 aa28.3■■■□□ 2.12
SREBF1-216ENST00000490796 SPATA31A7Q8IWB4 1347 aa28.3■■■□□ 2.12
SREBF1-216ENST00000490796 CHRNA2Q15822 529 aa28.3■■■□□ 2.12
SREBF1-216ENST00000490796 SIN3AQ96ST3 1273 aa28.3■■■□□ 2.12
SREBF1-216ENST00000490796 STRN4Q9NRL3 753 aa28.29■■■□□ 2.12
SREBF1-216ENST00000490796 PPIP5K1Q6PFW1 1433 aa28.28■■■□□ 2.12
SREBF1-216ENST00000490796 TOPAZ1Q8N9V7 1692 aa28.28■■■□□ 2.12
SREBF1-216ENST00000490796 EVA1CP58658 441 aa28.27■■■□□ 2.12
SREBF1-216ENST00000490796 DEFB132Q7Z7B7 95 aa28.27■■■□□ 2.12
SREBF1-216ENST00000490796 CRYBG1Q9Y4K1 1723 aa28.26■■■□□ 2.12
SREBF1-216ENST00000490796 NLRP13Q86W25 1043 aa28.25■■■□□ 2.11
SREBF1-216ENST00000490796 EVC2Q86UK5 1308 aa28.22■■■□□ 2.11
SREBF1-216ENST00000490796 PHRF1Q9P1Y6 1649 aaKnown RBP28.22■■■□□ 2.11
SREBF1-216ENST00000490796 BAG6P46379 1132 aa28.22■■■□□ 2.11
SREBF1-216ENST00000490796 CABP1Q9NZU7 370 aa28.22■■■□□ 2.11
SREBF1-216ENST00000490796 QRICH2Q9H0J4 1663 aa28.22■■■□□ 2.11
SREBF1-216ENST00000490796 ROCK2O75116 1388 aaKnown RBP28.22■■■□□ 2.11
SREBF1-216ENST00000490796 SPATA31A1Q5TZJ5 1347 aa28.2■■■□□ 2.11
SREBF1-216ENST00000490796 BRD4O60885 1362 aaPredicted RBP28.2■■■□□ 2.1
SREBF1-216ENST00000490796 USP35Q9P2H5 1018 aa28.19■■■□□ 2.1
SREBF1-216ENST00000490796 USP19O94966 1318 aa28.18■■■□□ 2.1
SREBF1-216ENST00000490796 SRCAPQ6ZRS2 3230 aa28.17■■■□□ 2.1
SREBF1-216ENST00000490796 GCP02774 474 aa28.17■■■□□ 2.1
SREBF1-216ENST00000490796 FAM182BQ5T319 152 aa28.17■■■□□ 2.1
SREBF1-216ENST00000490796 ZBTB7CA1YPR0 619 aa28.16■■■□□ 2.1
SREBF1-216ENST00000490796 CPDO75976 1380 aa28.15■■■□□ 2.1
SREBF1-216ENST00000490796 NLRP6P59044 892 aa28.15■■■□□ 2.1
SREBF1-216ENST00000490796 TRPM1Q7Z4N2 1603 aa28.14■■■□□ 2.1
SREBF1-216ENST00000490796 NRKQ7Z2Y5 1582 aa28.13■■■□□ 2.09
SREBF1-216ENST00000490796 SSH2Q76I76 1423 aa28.13■■■□□ 2.09
SREBF1-216ENST00000490796 USP6P35125 1406 aa28.12■■■□□ 2.09
SREBF1-216ENST00000490796 THSD7AQ9UPZ6 1657 aa28.11■■■□□ 2.09
SREBF1-216ENST00000490796 PDE3BQ13370 1112 aa28.11■■■□□ 2.09
SREBF1-216ENST00000490796 LARP1Q6PKG0 1096 aaKnown RBP28.11■■■□□ 2.09
SREBF1-216ENST00000490796 FAM196AQ6ZSG2 479 aa28.1■■■□□ 2.09
SREBF1-216ENST00000490796 TCP11L2Q8N4U5 519 aa28.1■■■□□ 2.09
SREBF1-216ENST00000490796 BARGINQ6ZT62 677 aa28.09■■■□□ 2.09
SREBF1-216ENST00000490796 ZNF692Q9BU19 519 aaPredicted RBP28.09■■■□□ 2.09
SREBF1-216ENST00000490796 CAMTA1Q9Y6Y1 1673 aa28.08■■■□□ 2.09
SREBF1-216ENST00000490796 EN1Q05925 392 aaPredicted RBP28.08■■■□□ 2.09
SREBF1-216ENST00000490796 RGPD1P0DJD0 1748 aa28.06■■■□□ 2.08
SREBF1-216ENST00000490796 CARD11Q9BXL7 1154 aa28.05■■■□□ 2.08
SREBF1-216ENST00000490796 THRAP3Q9Y2W1 955 aaKnown RBP28.05■■■□□ 2.08
SREBF1-216ENST00000490796 TRIM37O94972 964 aa28.04■■■□□ 2.08
SREBF1-216ENST00000490796 TONSLQ96HA7 1378 aa28.03■■■□□ 2.08
SREBF1-216ENST00000490796 LMO7Q8WWI1 1683 aa28.01■■■□□ 2.07
SREBF1-216ENST00000490796 TTC21BQ7Z4L5 1316 aa28.01■■■□□ 2.07
SREBF1-216ENST00000490796 PSDA5PKW4 1024 aaPredicted RBP28.01■■■□□ 2.07
SREBF1-216ENST00000490796 AATKQ6ZMQ8 1374 aa28■■■□□ 2.07
SREBF1-216ENST00000490796 KCNH5Q8NCM2 988 aa28■■■□□ 2.07
SREBF1-216ENST00000490796 COL5A2P05997 1499 aaPredicted RBP28■■■□□ 2.07
SREBF1-216ENST00000490796 TTC21AQ8NDW8 1320 aa27.99■■■□□ 2.07
SREBF1-216ENST00000490796 APBA3O96018 575 aa27.99■■■□□ 2.07
SREBF1-216ENST00000490796 SOX12O15370 315 aa27.98■■■□□ 2.07
SREBF1-216ENST00000490796 TOM1L2Q6ZVM7 507 aa27.98■■■□□ 2.07
SREBF1-216ENST00000490796 CRB1P82279 1406 aa27.98■■■□□ 2.07
SREBF1-216ENST00000490796 KTN1Q86UP2 1357 aaKnown RBP27.98■■■□□ 2.07
SREBF1-216ENST00000490796 SLIT3O75094 1523 aa27.97■■■□□ 2.07
SREBF1-216ENST00000490796 DISP2A7MBM2 1401 aa27.96■■■□□ 2.07
SREBF1-216ENST00000490796 EZH2Q15910 746 aaKnown RBP27.96■■■□□ 2.07
SREBF1-216ENST00000490796 PIK3C2AO00443 1686 aa27.94■■■□□ 2.06
SREBF1-216ENST00000490796 TMC1Q8TDI8 760 aa27.94■■■□□ 2.06
SREBF1-216ENST00000490796 C11orf95C9JLR9 678 aaPredicted RBP27.93■■■□□ 2.06
SREBF1-216ENST00000490796 CSB-PGBD3P0DP91 1061 aa27.93■■■□□ 2.06
SREBF1-216ENST00000490796 SBNO2Q9Y2G9 1366 aa27.93■■■□□ 2.06
SREBF1-216ENST00000490796 R3HDM1Q15032 1099 aaKnown RBP27.92■■■□□ 2.06
SREBF1-216ENST00000490796 TNS1Q9HBL0 1735 aaKnown RBP27.92■■■□□ 2.06
SREBF1-216ENST00000490796 CPSF1Q10570 1443 aaKnown RBP27.92■■■□□ 2.06
SREBF1-216ENST00000490796 ARHGEF25Q86VW2 580 aa27.91■■■□□ 2.06
SREBF1-216ENST00000490796 CAMKK2Q96RR4 588 aa27.91■■■□□ 2.06
SREBF1-216ENST00000490796 AKAP12Q02952 1782 aa27.91■■■□□ 2.06
SREBF1-216ENST00000490796 PARD3Q8TEW0 1356 aa27.9■■■□□ 2.06
SREBF1-216ENST00000490796 DDB1Q16531 1140 aa27.9■■■□□ 2.06
SREBF1-216ENST00000490796 HDGFL2Q7Z4V5 671 aaPredicted RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms