RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 NUDT16Q96DE0 195 aaKnown RBP13.28□□□□□ -0.28
SUPT20H-220ENST00000490716 MINK1Q8N4C8 1332 aaPredicted RBP13.27□□□□□ -0.28
SUPT20H-220ENST00000490716 FAM208AQ9UK61 1670 aaKnown RBP13.27□□□□□ -0.29
SUPT20H-220ENST00000490716 ARHGEF10O15013 1369 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 USP31Q70CQ4 1352 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 DISP3Q9P2K9 1392 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 CPDO75976 1380 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 NEUROD1Q13562 356 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 ESCO1Q5FWF5 840 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 POTEAQ6S8J7 498 aa13.26□□□□□ -0.29
SUPT20H-220ENST00000490716 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
SUPT20H-220ENST00000490716 OVOS2A0A0J9YW53 1432 aa13.25□□□□□ -0.29
SUPT20H-220ENST00000490716 OVOS2Q6IE36 1432 aa13.25□□□□□ -0.29
SUPT20H-220ENST00000490716 HIRIP3Q9BW71 556 aaPredicted RBP13.25□□□□□ -0.29
SUPT20H-220ENST00000490716 TNS1Q9HBL0 1735 aaKnown RBP13.25□□□□□ -0.29
SUPT20H-220ENST00000490716 SBF2Q86WG5 1849 aa13.24□□□□□ -0.29
SUPT20H-220ENST00000490716 FOXO3O43524 673 aa13.24□□□□□ -0.29
SUPT20H-220ENST00000490716 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
SUPT20H-220ENST00000490716 RGS12O14924 1447 aa13.24□□□□□ -0.29
SUPT20H-220ENST00000490716 KRT28Q7Z3Y7 464 aa13.23□□□□□ -0.29
SUPT20H-220ENST00000490716 C14orf37Q86TY3 774 aa13.23□□□□□ -0.29
SUPT20H-220ENST00000490716 USP47Q96K76 1375 aa13.23□□□□□ -0.29
SUPT20H-220ENST00000490716 NINLQ9Y2I6 1382 aa13.23□□□□□ -0.29
SUPT20H-220ENST00000490716 ACEP12821 1306 aa13.23□□□□□ -0.29
SUPT20H-220ENST00000490716 POGKQ9P215 609 aa13.22□□□□□ -0.29
SUPT20H-220ENST00000490716 ATAD2Q6PL18 1390 aa13.22□□□□□ -0.29
SUPT20H-220ENST00000490716 LRRC37A3O60309 1634 aa13.22□□□□□ -0.29
SUPT20H-220ENST00000490716 RGPD2P0DJD1 1756 aa13.22□□□□□ -0.29
SUPT20H-220ENST00000490716 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
SUPT20H-220ENST00000490716 SAFB2Q14151 953 aaKnown RBP eCLIP13.21□□□□□ -0.29
SUPT20H-220ENST00000490716 RGPD3A6NKT7 1758 aaPredicted RBP13.21□□□□□ -0.29
SUPT20H-220ENST00000490716 RGPD4Q7Z3J3 1758 aa13.21□□□□□ -0.29
SUPT20H-220ENST00000490716 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
SUPT20H-220ENST00000490716 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
SUPT20H-220ENST00000490716 EDC4Q6P2E9 1401 aaKnown RBP13.19□□□□□ -0.3
SUPT20H-220ENST00000490716 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
SUPT20H-220ENST00000490716 A0A1W2PP64 1363 aa13.19□□□□□ -0.3
SUPT20H-220ENST00000490716 RGPD1P0DJD0 1748 aa13.18□□□□□ -0.3
SUPT20H-220ENST00000490716 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
SUPT20H-220ENST00000490716 PMFBP1Q8TBY8 1022 aa13.17□□□□□ -0.3
SUPT20H-220ENST00000490716 COL5A2P05997 1499 aaPredicted RBP13.17□□□□□ -0.3
SUPT20H-220ENST00000490716 ST20-MTHFSA0A0A6YYL1 179 aa13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 NCAPD2Q15021 1401 aa13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 RREB1Q92766 1687 aa13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 NUTM2FA1L443 756 aa13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 AFF2P51816 1311 aa13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 PSME1Q06323 249 aa13.16□□□□□ -0.3
SUPT20H-220ENST00000490716 ANKRD36BQ8N2N9 1353 aa13.15□□□□□ -0.3
SUPT20H-220ENST00000490716 MAP2P11137 1827 aaKnown RBP13.15□□□□□ -0.3
SUPT20H-220ENST00000490716 CABP1Q9NZU7 370 aa13.15□□□□□ -0.3
SUPT20H-220ENST00000490716 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
SUPT20H-220ENST00000490716 DISP2A7MBM2 1401 aa13.14□□□□□ -0.31
SUPT20H-220ENST00000490716 PKD1L3Q7Z443 1732 aa13.13□□□□□ -0.31
SUPT20H-220ENST00000490716 TTC21AQ8NDW8 1320 aa13.13□□□□□ -0.31
SUPT20H-220ENST00000490716 SMG6Q86US8 1419 aaKnown RBP13.13□□□□□ -0.31
SUPT20H-220ENST00000490716 SOCS7O14512 581 aa13.12□□□□□ -0.31
SUPT20H-220ENST00000490716 TTC21BQ7Z4L5 1316 aa13.12□□□□□ -0.31
SUPT20H-220ENST00000490716 ZNF772Q68DY9 489 aaPredicted RBP13.12□□□□□ -0.31
SUPT20H-220ENST00000490716 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
SUPT20H-220ENST00000490716 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
SUPT20H-220ENST00000490716 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
SUPT20H-220ENST00000490716 VPS72Q15906 364 aa13.09□□□□□ -0.31
SUPT20H-220ENST00000490716 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
SUPT20H-220ENST00000490716 BCL9O00512 1426 aa13.09□□□□□ -0.31
SUPT20H-220ENST00000490716 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
SUPT20H-220ENST00000490716 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.32
SUPT20H-220ENST00000490716 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
SUPT20H-220ENST00000490716 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.32
SUPT20H-220ENST00000490716 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
SUPT20H-220ENST00000490716 VIRMAQ69YN4 1812 aaKnown RBP13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 SLC24A1O60721 1099 aa13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 SPATA31A5Q5VU36 1347 aa13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 SPATA31A7Q8IWB4 1347 aa13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 SLC12A5Q9H2X9 1139 aa13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 NHSQ6T4R5 1651 aa13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 NUP188Q5SRE5 1749 aa13.07□□□□□ -0.32
SUPT20H-220ENST00000490716 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
SUPT20H-220ENST00000490716 ARHGEF25Q86VW2 580 aa13.06□□□□□ -0.32
SUPT20H-220ENST00000490716 SRPK2P78362 688 aaKnown RBP13.05□□□□□ -0.32
SUPT20H-220ENST00000490716 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
SUPT20H-220ENST00000490716 RBM6P78332 1123 aaKnown RBP13.04□□□□□ -0.32
SUPT20H-220ENST00000490716 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
SUPT20H-220ENST00000490716 GCP02774 474 aa13.04□□□□□ -0.32
SUPT20H-220ENST00000490716 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
SUPT20H-220ENST00000490716 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
SUPT20H-220ENST00000490716 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
SUPT20H-220ENST00000490716 USP21Q9UK80 565 aa13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 PAPPAQ13219 1627 aa13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 QSER1Q2KHR3 1735 aa13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 BLMP54132 1417 aaPredicted RBP13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 HSPA5P11021 654 aaKnown RBP13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 AXIN2Q9Y2T1 843 aa13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 TRPC5Q9UL62 973 aaPredicted RBP13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 LY75O60449 1722 aa13.03□□□□□ -0.32
SUPT20H-220ENST00000490716 NUTM2BA6NNL0 878 aaPredicted RBP13.02□□□□□ -0.32
SUPT20H-220ENST00000490716 NUTM2EB1AL46 878 aaPredicted RBP13.02□□□□□ -0.32
SUPT20H-220ENST00000490716 NUTM2AQ8IVF1 878 aaPredicted RBP13.02□□□□□ -0.32
SUPT20H-220ENST00000490716 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.32
SUPT20H-220ENST00000490716 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms