RNA–Protein interactions for RNA: ENST00000490435.5

ITGA4-211, Transcript of integrin subunit alpha 4, humanhuman

TSL 5

Gene ITGA4, Length 720 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-211ENST00000490435 TLL2Q9Y6L7 1015 aa11.58□□□□□ -0.56
ITGA4-211ENST00000490435 CTHP32929 405 aa11.57□□□□□ -0.56
ITGA4-211ENST00000490435 LYPD8Q6UX82 237 aa11.57□□□□□ -0.56
ITGA4-211ENST00000490435 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
ITGA4-211ENST00000490435 SPTLC1O15269 473 aa11.56□□□□□ -0.56
ITGA4-211ENST00000490435 LCE2CQ5TA81 110 aa11.56□□□□□ -0.56
ITGA4-211ENST00000490435 NXF1Q9UBU9 619 aaKnown RBP11.56□□□□□ -0.56
ITGA4-211ENST00000490435 TRIM66O15016 1216 aa11.55□□□□□ -0.56
ITGA4-211ENST00000490435 ZBTB3Q9H5J0 574 aa11.55□□□□□ -0.56
ITGA4-211ENST00000490435 PCDHB15Q9Y5E8 787 aa11.55□□□□□ -0.56
ITGA4-211ENST00000490435 AK7Q96M32 723 aa11.54□□□□□ -0.56
ITGA4-211ENST00000490435 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
ITGA4-211ENST00000490435 HRCP23327 699 aa11.53□□□□□ -0.56
ITGA4-211ENST00000490435 NNTQ13423 1086 aa11.53□□□□□ -0.56
ITGA4-211ENST00000490435 FAM174AQ8TBP5 190 aa11.53□□□□□ -0.56
ITGA4-211ENST00000490435 PRPF38BQ5VTL8 546 aaKnown RBP11.52□□□□□ -0.57
ITGA4-211ENST00000490435 RIC3Q7Z5B4 369 aa11.52□□□□□ -0.57
ITGA4-211ENST00000490435 NPAS3Q8IXF0 933 aa11.51□□□□□ -0.57
ITGA4-211ENST00000490435 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
ITGA4-211ENST00000490435 ADH1CP00326 375 aa11.49□□□□□ -0.57
ITGA4-211ENST00000490435 MAP10Q9P2G4 905 aa11.49□□□□□ -0.57
ITGA4-211ENST00000490435 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
ITGA4-211ENST00000490435 WDR4P57081 412 aaKnown RBP11.48□□□□□ -0.57
ITGA4-211ENST00000490435 SCARF1Q14162 830 aa11.48□□□□□ -0.57
ITGA4-211ENST00000490435 IRF7Q92985 503 aa11.48□□□□□ -0.57
ITGA4-211ENST00000490435 TIMP2P16035 220 aa11.47□□□□□ -0.57
ITGA4-211ENST00000490435 CSPP1Q1MSJ5 1256 aa11.47□□□□□ -0.57
ITGA4-211ENST00000490435 MRPL14Q6P1L8 145 aaKnown RBP11.47□□□□□ -0.57
ITGA4-211ENST00000490435 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
ITGA4-211ENST00000490435 FOXJ1Q92949 421 aa11.47□□□□□ -0.57
ITGA4-211ENST00000490435 CDK15Q96Q40 435 aa11.47□□□□□ -0.57
ITGA4-211ENST00000490435 ARID5BQ14865 1188 aa11.45□□□□□ -0.58
ITGA4-211ENST00000490435 AGERQ15109 404 aa11.45□□□□□ -0.58
ITGA4-211ENST00000490435 LOC100996750A0A140TA64 210 aa11.44□□□□□ -0.58
ITGA4-211ENST00000490435 NUTM2BA6NNL0 878 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-211ENST00000490435 NUTM2EB1AL46 878 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-211ENST00000490435 H3BM21 787 aa11.44□□□□□ -0.58
ITGA4-211ENST00000490435 NUTM2DQ5VT03 806 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-211ENST00000490435 NUTM2AQ8IVF1 878 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-211ENST00000490435 TSC1Q92574 1164 aa11.44□□□□□ -0.58
ITGA4-211ENST00000490435 KLF16Q9BXK1 252 aaPredicted RBP11.44□□□□□ -0.58
ITGA4-211ENST00000490435 KRTAP4-6Q9BYQ5 205 aa11.44□□□□□ -0.58
ITGA4-211ENST00000490435 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
ITGA4-211ENST00000490435 GMPRP36959 345 aa11.43□□□□□ -0.58
ITGA4-211ENST00000490435 NR5A1Q13285 461 aa11.43□□□□□ -0.58
ITGA4-211ENST00000490435 BPHLQ86WA6 291 aaPredicted RBP11.43□□□□□ -0.58
ITGA4-211ENST00000490435 PURBQ96QR8 312 aaKnown RBP11.43□□□□□ -0.58
ITGA4-211ENST00000490435 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
ITGA4-211ENST00000490435 VEGFBP49765 207 aa11.42□□□□□ -0.58
ITGA4-211ENST00000490435 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
ITGA4-211ENST00000490435 MYSM1Q5VVJ2 828 aa11.42□□□□□ -0.58
ITGA4-211ENST00000490435 ARMC2Q8NEN0 867 aa11.42□□□□□ -0.58
ITGA4-211ENST00000490435 LIMD1Q9UGP4 676 aa11.42□□□□□ -0.58
ITGA4-211ENST00000490435 PDE4DQ08499 809 aa11.41□□□□□ -0.58
ITGA4-211ENST00000490435 ZIC2O95409 532 aaPredicted RBP11.4□□□□□ -0.58
ITGA4-211ENST00000490435 QPCTQ16769 361 aa11.4□□□□□ -0.58
ITGA4-211ENST00000490435 LILRB3O75022 631 aa11.39□□□□□ -0.59
ITGA4-211ENST00000490435 C4orf48Q5BLP8 95 aa11.39□□□□□ -0.59
ITGA4-211ENST00000490435 ZFAND3Q9H8U3 227 aa11.39□□□□□ -0.59
ITGA4-211ENST00000490435 HELBQ8NG08 1087 aaPredicted RBP11.38□□□□□ -0.59
ITGA4-211ENST00000490435 NR3C2P08235 984 aa11.37□□□□□ -0.59
ITGA4-211ENST00000490435 GRM5P41594 1212 aa11.37□□□□□ -0.59
ITGA4-211ENST00000490435 NBPF14Q5TI25 921 aa11.37□□□□□ -0.59
ITGA4-211ENST00000490435 ZSCAN1Q8NBB4 408 aa11.37□□□□□ -0.59
ITGA4-211ENST00000490435 ITPKCQ96DU7 683 aa11.37□□□□□ -0.59
ITGA4-211ENST00000490435 ERBB4Q15303 1308 aa11.36□□□□□ -0.59
ITGA4-211ENST00000490435 UPP2O95045 317 aa11.35□□□□□ -0.59
ITGA4-211ENST00000490435 SOBPA7XYQ1 873 aa11.34□□□□□ -0.59
ITGA4-211ENST00000490435 C6orf118Q5T5N4 469 aa11.34□□□□□ -0.59
ITGA4-211ENST00000490435 C1QTNF2Q9BXJ5 285 aa11.34□□□□□ -0.59
ITGA4-211ENST00000490435 RSPH6AQ9H0K4 717 aa11.34□□□□□ -0.59
ITGA4-211ENST00000490435 MAN1A2O60476 641 aa11.33□□□□□ -0.6
ITGA4-211ENST00000490435 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
ITGA4-211ENST00000490435 SH3RF1Q7Z6J0 888 aa11.33□□□□□ -0.6
ITGA4-211ENST00000490435 SLC24A3Q9HC58 644 aa11.33□□□□□ -0.6
ITGA4-211ENST00000490435 RTL5Q5HYW3 569 aaPredicted RBP11.32□□□□□ -0.6
ITGA4-211ENST00000490435 MAP4K5Q9Y4K4 846 aa11.32□□□□□ -0.6
ITGA4-211ENST00000490435 BMP2P12643 396 aa11.31□□□□□ -0.6
ITGA4-211ENST00000490435 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
ITGA4-211ENST00000490435 VASH1Q7L8A9 365 aaPredicted RBP11.31□□□□□ -0.6
ITGA4-211ENST00000490435 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
ITGA4-211ENST00000490435 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
ITGA4-211ENST00000490435 FSHRP23945 695 aa11.3□□□□□ -0.6
ITGA4-211ENST00000490435 SH3BP5LQ7L8J4 393 aa11.3□□□□□ -0.6
ITGA4-211ENST00000490435 MEIOBQ8N635 442 aa11.3□□□□□ -0.6
ITGA4-211ENST00000490435 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
ITGA4-211ENST00000490435 LINC00528Q8N1L1 170 aa11.29□□□□□ -0.6
ITGA4-211ENST00000490435 GPKOWQ92917 476 aaPredicted RBP eCLIP11.29□□□□□ -0.6
ITGA4-211ENST00000490435 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
ITGA4-211ENST00000490435 EMILIN1Q9Y6C2 1016 aa11.28□□□□□ -0.6
ITGA4-211ENST00000490435 TSEN34Q9BSV6 310 aaKnown RBP11.26□□□□□ -0.61
ITGA4-211ENST00000490435 CARD14Q9BXL6 1004 aa11.26□□□□□ -0.61
ITGA4-211ENST00000490435 CCDC116Q8IYX3 515 aa11.25□□□□□ -0.61
ITGA4-211ENST00000490435 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
ITGA4-211ENST00000490435 SOS2Q07890 1332 aaPredicted RBP11.24□□□□□ -0.61
ITGA4-211ENST00000490435 PPFIA3O75145 1194 aa11.23□□□□□ -0.61
ITGA4-211ENST00000490435 CTDSPL2Q05D32 466 aa11.23□□□□□ -0.61
ITGA4-211ENST00000490435 DNMT3LQ9UJW3 386 aa11.22□□□□□ -0.61
ITGA4-211ENST00000490435 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.61
ITGA4-211ENST00000490435 PGPEP1Q9NXJ5 209 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms