RNA–Protein interactions for RNA: ENST00000490417.6

SFXN4-208, Transcript of sideroflexin 4, humanhuman

TSL 2

Gene SFXN4, Length 952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-208ENST00000490417 ARHGEF28Q8N1W1 1705 aaKnown RBP19.34■□□□□ 0.69
SFXN4-208ENST00000490417 SRPK2P78362 688 aaKnown RBP19.32■□□□□ 0.68
SFXN4-208ENST00000490417 CCDC61Q9Y6R9 512 aa19.32■□□□□ 0.68
SFXN4-208ENST00000490417 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
SFXN4-208ENST00000490417 TNS3Q68CZ2 1445 aa19.31■□□□□ 0.68
SFXN4-208ENST00000490417 COL22A1Q8NFW1 1626 aaPredicted RBP19.3■□□□□ 0.68
SFXN4-208ENST00000490417 SPDYE2BA6NHP3 402 aa19.3■□□□□ 0.68
SFXN4-208ENST00000490417 SPDYE6P0CI01 402 aa19.3■□□□□ 0.68
SFXN4-208ENST00000490417 SPDYE2Q495Y8 402 aa19.3■□□□□ 0.68
SFXN4-208ENST00000490417 QTRT2Q9H974 415 aaKnown RBP19.29■□□□□ 0.68
SFXN4-208ENST00000490417 USP21Q9UK80 565 aa19.29■□□□□ 0.68
SFXN4-208ENST00000490417 EVC2Q86UK5 1308 aa19.28■□□□□ 0.68
SFXN4-208ENST00000490417 PRR36Q9H6K5 1346 aa19.28■□□□□ 0.68
SFXN4-208ENST00000490417 PAK3O75914 559 aaPredicted RBP19.28■□□□□ 0.68
SFXN4-208ENST00000490417 CARD11Q9BXL7 1154 aa19.28■□□□□ 0.68
SFXN4-208ENST00000490417 RGPD8O14715 1765 aaPredicted RBP19.28■□□□□ 0.68
SFXN4-208ENST00000490417 RBM6P78332 1123 aaKnown RBP19.27■□□□□ 0.68
SFXN4-208ENST00000490417 FNBP4Q8N3X1 1017 aaPredicted RBP19.27■□□□□ 0.68
SFXN4-208ENST00000490417 TRPC5Q9UL62 973 aaPredicted RBP19.27■□□□□ 0.68
SFXN4-208ENST00000490417 CLSPNQ9HAW4 1339 aa19.26■□□□□ 0.67
SFXN4-208ENST00000490417 SLC24A1O60721 1099 aa19.26■□□□□ 0.67
SFXN4-208ENST00000490417 TRPM1Q7Z4N2 1603 aa19.25■□□□□ 0.67
SFXN4-208ENST00000490417 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
SFXN4-208ENST00000490417 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
SFXN4-208ENST00000490417 PLEKHG3A1L390 1219 aa19.25■□□□□ 0.67
SFXN4-208ENST00000490417 PCGF6Q9BYE7 350 aa19.25■□□□□ 0.67
SFXN4-208ENST00000490417 TIMELESSQ9UNS1 1208 aa19.25■□□□□ 0.67
SFXN4-208ENST00000490417 ATP7BP35670 1465 aa19.24■□□□□ 0.67
SFXN4-208ENST00000490417 NBPF8Q3BBV2 869 aa19.23■□□□□ 0.67
SFXN4-208ENST00000490417 CABP2Q9NPB3 220 aa19.22■□□□□ 0.67
SFXN4-208ENST00000490417 ACEP12821 1306 aa19.22■□□□□ 0.67
SFXN4-208ENST00000490417 CDK12Q9NYV4 1490 aaPredicted RBP19.21■□□□□ 0.67
SFXN4-208ENST00000490417 POLR3AO14802 1390 aaPredicted RBP19.2■□□□□ 0.66
SFXN4-208ENST00000490417 BRD4O60885 1362 aaPredicted RBP19.2■□□□□ 0.66
SFXN4-208ENST00000490417 PLEKHG5O94827 1062 aa19.2■□□□□ 0.66
SFXN4-208ENST00000490417 PPIP5K1Q6PFW1 1433 aa19.19■□□□□ 0.66
SFXN4-208ENST00000490417 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
SFXN4-208ENST00000490417 RBM42Q9BTD8 480 aaKnown RBP19.19■□□□□ 0.66
SFXN4-208ENST00000490417 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
SFXN4-208ENST00000490417 RALGAPBQ86X10 1494 aa19.18■□□□□ 0.66
SFXN4-208ENST00000490417 CABLES1Q8TDN4 633 aa19.18■□□□□ 0.66
SFXN4-208ENST00000490417 CABP1Q9NZU7 370 aa19.17■□□□□ 0.66
SFXN4-208ENST00000490417 ATAD2Q6PL18 1390 aa19.17■□□□□ 0.66
SFXN4-208ENST00000490417 ABTB2Q8N961 1025 aa19.16■□□□□ 0.66
SFXN4-208ENST00000490417 SSUH2Q9Y2M2 353 aa19.16■□□□□ 0.66
SFXN4-208ENST00000490417 SBNO2Q9Y2G9 1366 aa19.16■□□□□ 0.66
SFXN4-208ENST00000490417 MARF1Q9Y4F3 1742 aaKnown RBP19.14■□□□□ 0.66
SFXN4-208ENST00000490417 NLRP13Q86W25 1043 aa19.14■□□□□ 0.65
SFXN4-208ENST00000490417 GJD4Q96KN9 370 aaPredicted RBP19.14■□□□□ 0.65
SFXN4-208ENST00000490417 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
SFXN4-208ENST00000490417 ATRNO75882 1429 aa19.13■□□□□ 0.65
SFXN4-208ENST00000490417 TRPM3Q9HCF6 1732 aaPredicted RBP19.12■□□□□ 0.65
SFXN4-208ENST00000490417 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
SFXN4-208ENST00000490417 BCL9LQ86UU0 1499 aa19.12■□□□□ 0.65
SFXN4-208ENST00000490417 SLIT2O94813 1529 aa19.11■□□□□ 0.65
SFXN4-208ENST00000490417 PUS7Q96PZ0 661 aaKnown RBP19.11■□□□□ 0.65
SFXN4-208ENST00000490417 PRDM11Q9NQV5 511 aa19.11■□□□□ 0.65
SFXN4-208ENST00000490417 CCDC9Q9Y3X0 531 aaKnown RBP19.11■□□□□ 0.65
SFXN4-208ENST00000490417 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
SFXN4-208ENST00000490417 VPS72Q15906 364 aa19.1■□□□□ 0.65
SFXN4-208ENST00000490417 ALS2Q96Q42 1657 aa19.1■□□□□ 0.65
SFXN4-208ENST00000490417 NUTM2GQ5VZR2 741 aa19.08■□□□□ 0.64
SFXN4-208ENST00000490417 BTG4Q9NY30 223 aa19.08■□□□□ 0.64
SFXN4-208ENST00000490417 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
SFXN4-208ENST00000490417 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
SFXN4-208ENST00000490417 USP6P35125 1406 aa19.07■□□□□ 0.64
SFXN4-208ENST00000490417 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.06■□□□□ 0.64
SFXN4-208ENST00000490417 ST20-MTHFSA0A0A6YYL1 179 aa19.06■□□□□ 0.64
SFXN4-208ENST00000490417 NLRP6P59044 892 aa19.06■□□□□ 0.64
SFXN4-208ENST00000490417 CDCA8Q53HL2 280 aa19.06■□□□□ 0.64
SFXN4-208ENST00000490417 RGS12O14924 1447 aa19.06■□□□□ 0.64
SFXN4-208ENST00000490417 TTC21AQ8NDW8 1320 aa19.05■□□□□ 0.64
SFXN4-208ENST00000490417 PROM2Q8N271 834 aa19.05■□□□□ 0.64
SFXN4-208ENST00000490417 TERF2IPQ9NYB0 399 aa19.05■□□□□ 0.64
SFXN4-208ENST00000490417 NWD2Q9ULI1 1742 aa19.05■□□□□ 0.64
SFXN4-208ENST00000490417 ZC3H6P61129 1189 aaKnown RBP19.04■□□□□ 0.64
SFXN4-208ENST00000490417 KTN1Q86UP2 1357 aaKnown RBP19.04■□□□□ 0.64
SFXN4-208ENST00000490417 COL14A1Q05707 1796 aaKnown RBP19.04■□□□□ 0.64
SFXN4-208ENST00000490417 ABCA3Q99758 1704 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 GCP02774 474 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 EVA1CP58658 441 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 TMF1P82094 1093 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 KCNH5Q8NCM2 988 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 KIAA0232Q92628 1395 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 NINLQ9Y2I6 1382 aa19.03■□□□□ 0.64
SFXN4-208ENST00000490417 UPF1Q92900 1129 aaKnown RBP eCLIP19.02■□□□□ 0.64
SFXN4-208ENST00000490417 USP19O94966 1318 aa19.01■□□□□ 0.63
SFXN4-208ENST00000490417 A0A0G2JS52 829 aa19.01■□□□□ 0.63
SFXN4-208ENST00000490417 MYT1Q01538 1121 aa19.01■□□□□ 0.63
SFXN4-208ENST00000490417 USP47Q96K76 1375 aa19.01■□□□□ 0.63
SFXN4-208ENST00000490417 TTC21BQ7Z4L5 1316 aa19■□□□□ 0.63
SFXN4-208ENST00000490417 CPDO75976 1380 aa19■□□□□ 0.63
SFXN4-208ENST00000490417 PLCH1Q4KWH8 1693 aa19■□□□□ 0.63
SFXN4-208ENST00000490417 ONECUT3O60422 494 aaPredicted RBP18.99■□□□□ 0.63
SFXN4-208ENST00000490417 CCDC125Q86Z20 511 aa18.99■□□□□ 0.63
SFXN4-208ENST00000490417 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
SFXN4-208ENST00000490417 CPSF1Q10570 1443 aaKnown RBP18.99■□□□□ 0.63
SFXN4-208ENST00000490417 CHRNA2Q15822 529 aa18.98■□□□□ 0.63
SFXN4-208ENST00000490417 SEPT12Q8IYM1 358 aa18.98■□□□□ 0.63
SFXN4-208ENST00000490417 TESK2Q96S53 571 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms