RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-218ENST00000490032 HELBQ8NG08 1087 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-218ENST00000490032 MAP10Q9P2G4 905 aa9.26□□□□□ -0.93
HMGN1-218ENST00000490032 SIAH2O43255 324 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 SMPD1P17405 629 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 CTHP32929 405 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 NEUROD2Q15784 382 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 CRIPAKQ8N1N5 446 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 ZNF511Q8NB15 262 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 BAP1Q92560 729 aa9.25□□□□□ -0.93
HMGN1-218ENST00000490032 BRPF1P55201 1214 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-218ENST00000490032 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
HMGN1-218ENST00000490032 TSC1Q92574 1164 aa9.24□□□□□ -0.93
HMGN1-218ENST00000490032 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
HMGN1-218ENST00000490032 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
HMGN1-218ENST00000490032 EHBP1Q8NDI1 1231 aa9.23□□□□□ -0.93
HMGN1-218ENST00000490032 AAASQ9NRG9 546 aa9.23□□□□□ -0.93
HMGN1-218ENST00000490032 J3QL48 77 aa9.22□□□□□ -0.93
HMGN1-218ENST00000490032 SMCPP49901 116 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-218ENST00000490032 CTC1Q2NKJ3 1217 aa9.21□□□□□ -0.94
HMGN1-218ENST00000490032 ST8SIA5O15466 376 aa9.2□□□□□ -0.94
HMGN1-218ENST00000490032 VARSP26640 1264 aaKnown RBP9.2□□□□□ -0.94
HMGN1-218ENST00000490032 CTDSPL2Q05D32 466 aa9.2□□□□□ -0.94
HMGN1-218ENST00000490032 MPNDQ8N594 471 aa9.19□□□□□ -0.94
HMGN1-218ENST00000490032 ARMC2Q8NEN0 867 aa9.18□□□□□ -0.94
HMGN1-218ENST00000490032 AXIN1O15169 862 aa9.17□□□□□ -0.94
HMGN1-218ENST00000490032 ALDH1A1P00352 501 aa9.17□□□□□ -0.94
HMGN1-218ENST00000490032 IL27Q8NEV9 243 aa9.17□□□□□ -0.94
HMGN1-218ENST00000490032 FOXJ1Q92949 421 aa9.17□□□□□ -0.94
HMGN1-218ENST00000490032 ZNF787Q6DD87 383 aa9.16□□□□□ -0.94
HMGN1-218ENST00000490032 HPS1Q92902 700 aa9.16□□□□□ -0.94
HMGN1-218ENST00000490032 ATP1B4Q9UN42 357 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-218ENST00000490032 LRRN4Q8WUT4 740 aa9.15□□□□□ -0.94
HMGN1-218ENST00000490032 PCMTD1Q96MG8 357 aaPredicted RBP9.15□□□□□ -0.94
HMGN1-218ENST00000490032 RFC5P40937 340 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 NBPF14Q5TI25 921 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 SH3RF1Q7Z6J0 888 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 BPHLQ86WA6 291 aaPredicted RBP9.14□□□□□ -0.95
HMGN1-218ENST00000490032 FAM174AQ8TBP5 190 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 GPKOWQ92917 476 aaPredicted RBP eCLIP9.14□□□□□ -0.952e-6■■■■□ 20.4
HMGN1-218ENST00000490032 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 TLL2Q9Y6L7 1015 aa9.14□□□□□ -0.95
HMGN1-218ENST00000490032 AP1G2O75843 785 aa9.13□□□□□ -0.95
HMGN1-218ENST00000490032 SH3BP5LQ7L8J4 393 aa9.13□□□□□ -0.95
HMGN1-218ENST00000490032 CDK15Q96Q40 435 aa9.13□□□□□ -0.95
HMGN1-218ENST00000490032 POTECB2RU33 542 aa9.12□□□□□ -0.95
HMGN1-218ENST00000490032 C1QTNF2Q9BXJ5 285 aa9.12□□□□□ -0.95
HMGN1-218ENST00000490032 WASF2Q9Y6W5 498 aa9.12□□□□□ -0.95
HMGN1-218ENST00000490032 USP17L8P0C7I0 530 aa9.1□□□□□ -0.95
HMGN1-218ENST00000490032 NR6A1Q15406 480 aa9.1□□□□□ -0.95
HMGN1-218ENST00000490032 FKBPLQ9UIM3 349 aa9.1□□□□□ -0.95
HMGN1-218ENST00000490032 ZC3H4Q9UPT8 1303 aaKnown RBP9.09□□□□□ -0.95
HMGN1-218ENST00000490032 ADH1CP00326 375 aa9.09□□□□□ -0.95
HMGN1-218ENST00000490032 AGERQ15109 404 aa9.09□□□□□ -0.95
HMGN1-218ENST00000490032 TMEM259Q4ZIN3 620 aa9.09□□□□□ -0.95
HMGN1-218ENST00000490032 PDXDC2PQ6P474 469 aa9.09□□□□□ -0.95
HMGN1-218ENST00000490032 TRMT44Q8IYL2 757 aaKnown RBP9.08□□□□□ -0.96
HMGN1-218ENST00000490032 ATP13A2Q9NQ11 1180 aa9.08□□□□□ -0.96
HMGN1-218ENST00000490032 NNTQ13423 1086 aa9.07□□□□□ -0.96
HMGN1-218ENST00000490032 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
HMGN1-218ENST00000490032 GMPR2Q9P2T1 348 aaKnown RBP9.07□□□□□ -0.96
HMGN1-218ENST00000490032 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
HMGN1-218ENST00000490032 EPS8L1Q8TE68 723 aa9.06□□□□□ -0.96
HMGN1-218ENST00000490032 MAP4K5Q9Y4K4 846 aa9.06□□□□□ -0.96
HMGN1-218ENST00000490032 CAPN5O15484 640 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-218ENST00000490032 GRM5P41594 1212 aa9.05□□□□□ -0.96
HMGN1-218ENST00000490032 KLF16Q9BXK1 252 aaPredicted RBP9.05□□□□□ -0.96
HMGN1-218ENST00000490032 MAGEB6P1A0A0J9YX57 407 aa9.04□□□□□ -0.96
HMGN1-218ENST00000490032 NR5A1Q13285 461 aa9.04□□□□□ -0.96
HMGN1-218ENST00000490032 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
HMGN1-218ENST00000490032 ERFEQ4G0M1 354 aa9.04□□□□□ -0.96
HMGN1-218ENST00000490032 GPSM3Q9Y4H4 160 aa9.04□□□□□ -0.96
HMGN1-218ENST00000490032 TIMP2P16035 220 aa9.03□□□□□ -0.96
HMGN1-218ENST00000490032 OCSTAMPQ9BR26 566 aa9.03□□□□□ -0.96
HMGN1-218ENST00000490032 ARHGAP9Q9BRR9 750 aa9.03□□□□□ -0.96
HMGN1-218ENST00000490032 TRIM34Q9BYJ4 488 aa9.03□□□□□ -0.96
HMGN1-218ENST00000490032 C11orf95C9JLR9 678 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-218ENST00000490032 NR3C2P08235 984 aa9.02□□□□□ -0.97
HMGN1-218ENST00000490032 PNMA1Q8ND90 353 aa9.02□□□□□ -0.97
HMGN1-218ENST00000490032 ZNF775Q96BV0 537 aaPredicted RBP9.02□□□□□ -0.97
HMGN1-218ENST00000490032 TRIM47Q96LD4 638 aa9.02□□□□□ -0.97
HMGN1-218ENST00000490032 CARD14Q9BXL6 1004 aa9.02□□□□□ -0.97
HMGN1-218ENST00000490032 SENP2Q9HC62 589 aa9.02□□□□□ -0.97
HMGN1-218ENST00000490032 PTK2Q05397 1052 aa9.01□□□□□ -0.97
HMGN1-218ENST00000490032 TRIM46Q7Z4K8 759 aa9.01□□□□□ -0.97
HMGN1-218ENST00000490032 BANK1Q8NDB2 785 aa9.01□□□□□ -0.97
HMGN1-218ENST00000490032 SOCS7O14512 581 aa9□□□□□ -0.97
HMGN1-218ENST00000490032 WDR4P57081 412 aaKnown RBP9□□□□□ -0.97
HMGN1-218ENST00000490032 VASH1Q7L8A9 365 aaPredicted RBP9□□□□□ -0.97
HMGN1-218ENST00000490032 GJD4Q96KN9 370 aaPredicted RBP9□□□□□ -0.97
HMGN1-218ENST00000490032 KIFC2Q96AC6 838 aa8.99□□□□□ -0.97
HMGN1-218ENST00000490032 CDV3Q9UKY7 258 aaKnown RBP8.99□□□□□ -0.97
HMGN1-218ENST00000490032 BMP1P13497 986 aa8.98□□□□□ -0.97
HMGN1-218ENST00000490032 FSHRP23945 695 aa8.98□□□□□ -0.97
HMGN1-218ENST00000490032 ZBTB33Q86T24 672 aa8.98□□□□□ -0.97
HMGN1-218ENST00000490032 ZIC2O95409 532 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-218ENST00000490032 SNRPBP14678 240 aaKnown RBP8.97□□□□□ -0.97
HMGN1-218ENST00000490032 ADAM32Q8TC27 787 aa8.97□□□□□ -0.97
HMGN1-218ENST00000490032 ITPKCQ96DU7 683 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms