RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SIN3AQ96ST3 1273 aa28.12■■■□□ 2.09
TNFRSF1B-202ENST00000489921 ONECUT3O60422 494 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF1B-202ENST00000489921 POLR3AO14802 1390 aaPredicted RBP28.11■■■□□ 2.09
TNFRSF1B-202ENST00000489921 COL14A1Q05707 1796 aaKnown RBP28.09■■■□□ 2.09
TNFRSF1B-202ENST00000489921 PAK3O75914 559 aaPredicted RBP28.08■■■□□ 2.09
TNFRSF1B-202ENST00000489921 CCDC61Q9Y6R9 512 aa28.08■■■□□ 2.09
TNFRSF1B-202ENST00000489921 PLEKHG3A1L390 1219 aa28.07■■■□□ 2.08
TNFRSF1B-202ENST00000489921 ACEP12821 1306 aa28.07■■■□□ 2.08
TNFRSF1B-202ENST00000489921 SRCAPQ6ZRS2 3230 aa28.06■■■□□ 2.08
TNFRSF1B-202ENST00000489921 SEPT12Q8IYM1 358 aa28.06■■■□□ 2.08
TNFRSF1B-202ENST00000489921 NBPF8Q3BBV2 869 aa28.05■■■□□ 2.08
TNFRSF1B-202ENST00000489921 TRPM1Q7Z4N2 1603 aa28.05■■■□□ 2.08
TNFRSF1B-202ENST00000489921 QRICH2Q9H0J4 1663 aa28.05■■■□□ 2.08
TNFRSF1B-202ENST00000489921 BTG4Q9NY30 223 aa28.05■■■□□ 2.08
TNFRSF1B-202ENST00000489921 PHRF1Q9P1Y6 1649 aaKnown RBP28.04■■■□□ 2.08
TNFRSF1B-202ENST00000489921 CENPJQ9HC77 1338 aaPredicted RBP28.04■■■□□ 2.08
TNFRSF1B-202ENST00000489921 CCDC125Q86Z20 511 aa28.01■■■□□ 2.07
TNFRSF1B-202ENST00000489921 CCDC9Q9Y3X0 531 aaKnown RBP28.01■■■□□ 2.07
TNFRSF1B-202ENST00000489921 NEUROD1Q13562 356 aa27.99■■■□□ 2.07
TNFRSF1B-202ENST00000489921 CABP2Q9NPB3 220 aa27.99■■■□□ 2.07
TNFRSF1B-202ENST00000489921 NUTM2GQ5VZR2 741 aa27.98■■■□□ 2.07
TNFRSF1B-202ENST00000489921 PPIP5K1Q6PFW1 1433 aa27.97■■■□□ 2.07
TNFRSF1B-202ENST00000489921 KIAA0232Q92628 1395 aa27.97■■■□□ 2.07
TNFRSF1B-202ENST00000489921 SRPK2P78362 688 aaKnown RBP27.96■■■□□ 2.07
TNFRSF1B-202ENST00000489921 PRDM11Q9NQV5 511 aa27.95■■■□□ 2.06
TNFRSF1B-202ENST00000489921 SPATA31A5Q5VU36 1347 aa27.94■■■□□ 2.06
TNFRSF1B-202ENST00000489921 SPATA31A7Q8IWB4 1347 aa27.94■■■□□ 2.06
TNFRSF1B-202ENST00000489921 BLMP54132 1417 aaPredicted RBP27.94■■■□□ 2.06
TNFRSF1B-202ENST00000489921 FAM98CQ17RN3 349 aaKnown RBP27.94■■■□□ 2.06
TNFRSF1B-202ENST00000489921 CHRNA2Q15822 529 aa27.93■■■□□ 2.06
TNFRSF1B-202ENST00000489921 KRT27Q7Z3Y8 459 aa27.93■■■□□ 2.06
TNFRSF1B-202ENST00000489921 NRKQ7Z2Y5 1582 aa27.92■■■□□ 2.06
TNFRSF1B-202ENST00000489921 ZC3H6P61129 1189 aaKnown RBP27.92■■■□□ 2.06
TNFRSF1B-202ENST00000489921 THSD7AQ9UPZ6 1657 aa27.91■■■□□ 2.06
TNFRSF1B-202ENST00000489921 ABTB2Q8N961 1025 aa27.9■■■□□ 2.06
TNFRSF1B-202ENST00000489921 CABP1Q9NZU7 370 aa27.9■■■□□ 2.06
TNFRSF1B-202ENST00000489921 USP19O94966 1318 aa27.9■■■□□ 2.06
TNFRSF1B-202ENST00000489921 ROCK2O75116 1388 aaKnown RBP27.88■■■□□ 2.05
TNFRSF1B-202ENST00000489921 LMO7Q8WWI1 1683 aa27.87■■■□□ 2.05
TNFRSF1B-202ENST00000489921 DEFB132Q7Z7B7 95 aa27.86■■■□□ 2.05
TNFRSF1B-202ENST00000489921 CAMTA1Q9Y6Y1 1673 aa27.86■■■□□ 2.05
TNFRSF1B-202ENST00000489921 SPATA31A1Q5TZJ5 1347 aa27.86■■■□□ 2.05
TNFRSF1B-202ENST00000489921 USP6P35125 1406 aa27.85■■■□□ 2.05
TNFRSF1B-202ENST00000489921 SSH2Q76I76 1423 aa27.85■■■□□ 2.05
TNFRSF1B-202ENST00000489921 BRD4O60885 1362 aaPredicted RBP27.85■■■□□ 2.05
TNFRSF1B-202ENST00000489921 CPDO75976 1380 aa27.85■■■□□ 2.05
TNFRSF1B-202ENST00000489921 EVC2Q86UK5 1308 aa27.84■■■□□ 2.05
TNFRSF1B-202ENST00000489921 A0A0G2JS52 829 aa27.83■■■□□ 2.05
TNFRSF1B-202ENST00000489921 MYT1Q01538 1121 aa27.83■■■□□ 2.05
TNFRSF1B-202ENST00000489921 GCP02774 474 aa27.82■■■□□ 2.04
TNFRSF1B-202ENST00000489921 NLRP13Q86W25 1043 aa27.82■■■□□ 2.04
TNFRSF1B-202ENST00000489921 STRN4Q9NRL3 753 aa27.82■■■□□ 2.04
TNFRSF1B-202ENST00000489921 ZRANB1Q9UGI0 708 aa27.82■■■□□ 2.04
TNFRSF1B-202ENST00000489921 FAM182BQ5T319 152 aa27.8■■■□□ 2.04
TNFRSF1B-202ENST00000489921 PIK3C2AO00443 1686 aa27.8■■■□□ 2.04
TNFRSF1B-202ENST00000489921 AKAP12Q02952 1782 aa27.79■■■□□ 2.04
TNFRSF1B-202ENST00000489921 SLIT3O75094 1523 aa27.77■■■□□ 2.04
TNFRSF1B-202ENST00000489921 LARP1Q6PKG0 1096 aaKnown RBP27.76■■■□□ 2.03
TNFRSF1B-202ENST00000489921 SF3B2Q13435 895 aaKnown RBP27.75■■■□□ 2.03
TNFRSF1B-202ENST00000489921 NLRP6P59044 892 aa27.74■■■□□ 2.03
TNFRSF1B-202ENST00000489921 RGPD1P0DJD0 1748 aa27.74■■■□□ 2.03
TNFRSF1B-202ENST00000489921 COL18A1P39060 1754 aa27.73■■■□□ 2.03
TNFRSF1B-202ENST00000489921 EVA1CP58658 441 aa27.73■■■□□ 2.03
TNFRSF1B-202ENST00000489921 BARGINQ6ZT62 677 aa27.73■■■□□ 2.03
TNFRSF1B-202ENST00000489921 USP35Q9P2H5 1018 aa27.73■■■□□ 2.03
TNFRSF1B-202ENST00000489921 CPSF1Q10570 1443 aaKnown RBP27.73■■■□□ 2.03
TNFRSF1B-202ENST00000489921 SBNO2Q9Y2G9 1366 aa27.73■■■□□ 2.03
TNFRSF1B-202ENST00000489921 TNS1Q9HBL0 1735 aaKnown RBP27.72■■■□□ 2.03
TNFRSF1B-202ENST00000489921 COL5A2P05997 1499 aaPredicted RBP27.72■■■□□ 2.03
TNFRSF1B-202ENST00000489921 ZNF692Q9BU19 519 aaPredicted RBP27.71■■■□□ 2.03
TNFRSF1B-202ENST00000489921 TTC21BQ7Z4L5 1316 aa27.7■■■□□ 2.03
TNFRSF1B-202ENST00000489921 CARD11Q9BXL7 1154 aa27.7■■■□□ 2.02
TNFRSF1B-202ENST00000489921 AATKQ6ZMQ8 1374 aa27.68■■■□□ 2.02
TNFRSF1B-202ENST00000489921 MON2Q7Z3U7 1717 aa27.67■■■□□ 2.02
TNFRSF1B-202ENST00000489921 TCP11L2Q8N4U5 519 aa27.67■■■□□ 2.02
TNFRSF1B-202ENST00000489921 TONSLQ96HA7 1378 aa27.67■■■□□ 2.02
TNFRSF1B-202ENST00000489921 BAG6P46379 1132 aa27.66■■■□□ 2.02
TNFRSF1B-202ENST00000489921 CD163L1Q9NR16 1453 aa27.65■■■□□ 2.02
TNFRSF1B-202ENST00000489921 EN1Q05925 392 aaPredicted RBP27.65■■■□□ 2.02
TNFRSF1B-202ENST00000489921 TRIM26Q12899 539 aaPredicted RBP27.65■■■□□ 2.02
TNFRSF1B-202ENST00000489921 AXIN2Q9Y2T1 843 aa27.65■■■□□ 2.02
TNFRSF1B-202ENST00000489921 DISP2A7MBM2 1401 aa27.65■■■□□ 2.02
TNFRSF1B-202ENST00000489921 PARP4Q9UKK3 1724 aaKnown RBP27.64■■■□□ 2.02
TNFRSF1B-202ENST00000489921 THRAP3Q9Y2W1 955 aaKnown RBP27.64■■■□□ 2.02
TNFRSF1B-202ENST00000489921 RGPD5Q99666 1765 aa27.63■■■□□ 2.01
TNFRSF1B-202ENST00000489921 KTN1Q86UP2 1357 aaKnown RBP27.63■■■□□ 2.01
TNFRSF1B-202ENST00000489921 FAM196AQ6ZSG2 479 aa27.63■■■□□ 2.01
TNFRSF1B-202ENST00000489921 CRB1P82279 1406 aa27.63■■■□□ 2.01
TNFRSF1B-202ENST00000489921 TTC21AQ8NDW8 1320 aa27.63■■■□□ 2.01
TNFRSF1B-202ENST00000489921 ARHGEF25Q86VW2 580 aa27.62■■■□□ 2.01
TNFRSF1B-202ENST00000489921 ZBTB7CA1YPR0 619 aa27.61■■■□□ 2.01
TNFRSF1B-202ENST00000489921 NFAT5O94916 1531 aa27.61■■■□□ 2.01
TNFRSF1B-202ENST00000489921 TRIM37O94972 964 aa27.6■■■□□ 2.01
TNFRSF1B-202ENST00000489921 USP54Q70EL1 1684 aa27.59■■■□□ 2.01
TNFRSF1B-202ENST00000489921 PDE3BQ13370 1112 aa27.58■■■□□ 2.01
TNFRSF1B-202ENST00000489921 KCNH5Q8NCM2 988 aa27.57■■■□□ 2
TNFRSF1B-202ENST00000489921 EZH2Q15910 746 aaKnown RBP27.56■■■□□ 2
TNFRSF1B-202ENST00000489921 CAMKK2Q96RR4 588 aa27.56■■■□□ 2
TNFRSF1B-202ENST00000489921 SLC12A5Q9H2X9 1139 aa27.56■■■□□ 2
TNFRSF1B-202ENST00000489921 PEAK1Q9H792 1746 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms